RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 PHLPP1O60346 1717 aa15.73■□□□□ 0.11
ATP2C1-201ENST00000328560 CCDC151A5D8V7 595 aa15.73■□□□□ 0.11
ATP2C1-201ENST00000328560 KLRC4O43908 158 aa15.73■□□□□ 0.11
ATP2C1-201ENST00000328560 IPO7O95373 1038 aaKnown RBP15.73■□□□□ 0.11
ATP2C1-201ENST00000328560 GRAPQ13588 217 aa15.73■□□□□ 0.11
ATP2C1-201ENST00000328560 DYMQ7RTS9 669 aa15.73■□□□□ 0.11
ATP2C1-201ENST00000328560 NOA1Q8NC60 698 aaKnown RBP15.73■□□□□ 0.11
ATP2C1-201ENST00000328560 GRAPLQ8TC17 118 aaPredicted RBP15.73■□□□□ 0.11
ATP2C1-201ENST00000328560 RRP36Q96EU6 259 aaKnown RBP15.73■□□□□ 0.11
ATP2C1-201ENST00000328560 ZNHIT6Q9NWK9 470 aaKnown RBP15.73■□□□□ 0.11
ATP2C1-201ENST00000328560 CCDC66A2RUB6 948 aa15.73■□□□□ 0.11
ATP2C1-201ENST00000328560 F8W031 263 aaPredicted RBP15.73■□□□□ 0.11
ATP2C1-201ENST00000328560 C6orf229H3BNL8 230 aa15.73■□□□□ 0.11
ATP2C1-201ENST00000328560 TBCKQ8TEA7 893 aa15.73■□□□□ 0.11
ATP2C1-201ENST00000328560 C6orf50Q9HD87 102 aa15.73■□□□□ 0.11
ATP2C1-201ENST00000328560 ABCB6Q9NP58 842 aa15.73■□□□□ 0.11
ATP2C1-201ENST00000328560 REXO2Q9Y3B8 237 aaKnown RBP15.73■□□□□ 0.11
ATP2C1-201ENST00000328560 RAD21O60216 631 aa15.73■□□□□ 0.11
ATP2C1-201ENST00000328560 IDEP14735 1019 aa15.73■□□□□ 0.11
ATP2C1-201ENST00000328560 CYP27A1Q02318 531 aa15.73■□□□□ 0.11
ATP2C1-201ENST00000328560 ANKRD40Q6AI12 368 aa15.73■□□□□ 0.11
ATP2C1-201ENST00000328560 HINFPQ9BQA5 517 aa15.73■□□□□ 0.11
ATP2C1-201ENST00000328560 COL16A1Q07092 1604 aaPredicted RBP15.72■□□□□ 0.11
ATP2C1-201ENST00000328560 PALM3A6NDB9 673 aaPredicted RBP15.72■□□□□ 0.11
ATP2C1-201ENST00000328560 RGL2O15211 777 aa15.72■□□□□ 0.11
ATP2C1-201ENST00000328560 BRD3Q15059 726 aa15.72■□□□□ 0.11
ATP2C1-201ENST00000328560 CEP95Q96GE4 821 aa15.72■□□□□ 0.11
ATP2C1-201ENST00000328560 CNOT6LQ96LI5 555 aaKnown RBP15.72■□□□□ 0.11
ATP2C1-201ENST00000328560 NOC4LQ9BVI4 516 aaKnown RBP15.72■□□□□ 0.11
ATP2C1-201ENST00000328560 PDE11AQ9HCR9 933 aa15.72■□□□□ 0.11
ATP2C1-201ENST00000328560 KBTBD4Q9NVX7 518 aa15.72■□□□□ 0.11
ATP2C1-201ENST00000328560 MACROD2A1Z1Q3 448 aa15.72■□□□□ 0.11
ATP2C1-201ENST00000328560 G3V3G9 751 aa15.72■□□□□ 0.11
ATP2C1-201ENST00000328560 PHACTR2O75167 634 aa15.72■□□□□ 0.11
ATP2C1-201ENST00000328560 ATP2B2Q01814 1243 aa15.72■□□□□ 0.11
ATP2C1-201ENST00000328560 DCAF8Q5TAQ9 597 aa15.72■□□□□ 0.11
ATP2C1-201ENST00000328560 TTI2Q6NXR4 508 aa15.72■□□□□ 0.11
ATP2C1-201ENST00000328560 CLEC10AQ8IUN9 316 aa15.72■□□□□ 0.11
ATP2C1-201ENST00000328560 GIMAP8Q8ND71 665 aaPredicted RBP15.72■□□□□ 0.11
ATP2C1-201ENST00000328560 COA7Q96BR5 231 aa15.72■□□□□ 0.11
ATP2C1-201ENST00000328560 CCSER1Q9C0I3 900 aa15.72■□□□□ 0.11
ATP2C1-201ENST00000328560 M0R2N6 131 aa15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 ERLIN1O75477 346 aa15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 RHOBTB3O94955 611 aa15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 EEF1GP26641 437 aaKnown RBP15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 VSNL1P62760 191 aa15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 KRT25Q7Z3Z0 450 aa15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 NEK8Q86SG6 692 aa15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 LRRC47Q8N1G4 583 aaKnown RBP15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 P2RX5Q93086 422 aa15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 CDK5RAP3Q96JB5 506 aa15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 TRIM9Q9C026 710 aa15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 USP17L5A8MUK1 530 aa15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 NKRFO15226 690 aaKnown RBP eCLIP15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 ATP8B1O43520 1251 aa15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 DNM2P50570 870 aa15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 POTEDQ86YR6 584 aa15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 GPCPD1Q9NPB8 672 aa15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 PDS5AQ29RF7 1337 aaKnown RBP15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 GNA11P29992 359 aa15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 GPSM2P81274 684 aa15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 KCNB1Q14721 858 aa15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 MFSD14BQ5SR56 506 aa15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 CALML4Q96GE6 196 aa15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 DRC1Q96MC2 740 aa15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 DUSP9Q99956 384 aaKnown RBP15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 THAP9Q9H5L6 903 aa15.71■□□□□ 0.11
ATP2C1-201ENST00000328560 MYH8P13535 1937 aa15.71■□□□□ 0.1
ATP2C1-201ENST00000328560 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 H3BQF6 201 aa15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 TMED8Q6PL24 325 aaPredicted RBP15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 CAGE1Q8TC20 777 aa15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 CCDC102AQ96A19 550 aa15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 GDAP1L1Q96MZ0 367 aa15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 TMX4Q9H1E5 349 aaPredicted RBP15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 GGA1Q9UJY5 639 aa15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 MARCH6O60337 910 aa15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 CYP2C19P33261 490 aa15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 LMAN1P49257 510 aa15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 WDR59Q6PJI9 974 aa15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 REXO1Q8N1G1 1221 aaKnown RBP15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 JAKMIP2Q96AA8 810 aa15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 VPS18Q9P253 973 aa15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 DUSP10Q9Y6W6 482 aa15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 ZMYND10O75800 440 aa15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 ATP1A1P05023 1023 aaKnown RBP15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 SSBP05455 408 aaKnown RBP eCLIP15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 HERVK_113P62684 666 aa15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 WHAMMP3Q1A5X7 153 aa15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 GALNT17Q6IS24 598 aa15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 SLF2Q8IX21 1173 aa15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 ANKS1AQ92625 1134 aa15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 RTFDC1Q9BY42 306 aaPredicted RBP15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 ZMYND12Q9H0C1 365 aa15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 CD209Q9NNX6 404 aa15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 FAM207AQ9NSI2 230 aaPredicted RBP15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 CAPN11Q9UMQ6 739 aa15.7■□□□□ 0.1
ATP2C1-201ENST00000328560 CCNE1P24864 410 aa15.69■□□□□ 0.1
ATP2C1-201ENST00000328560 ZNF507Q8TCN5 953 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms