RNA–Protein interactions for RNA: ENST00000328333.12

COL7A1-201, Transcript of collagen type VII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL7A1, Length 9,276 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-201ENST00000328333 LRRC37BQ96QE4 947 aa15.52■□□□□ 0.08
COL7A1-201ENST00000328333 ZBTB3Q9H5J0 574 aa15.52■□□□□ 0.08
COL7A1-201ENST00000328333 EFCAB14O75071 495 aa15.52■□□□□ 0.08
COL7A1-201ENST00000328333 ART3Q13508 389 aa15.52■□□□□ 0.08
COL7A1-201ENST00000328333 TDRD7Q8NHU6 1098 aaKnown RBP15.52■□□□□ 0.08
COL7A1-201ENST00000328333 NEK9Q8TD19 979 aa15.52■□□□□ 0.08
COL7A1-201ENST00000328333 FRMD3A2A2Y4 597 aa15.52■□□□□ 0.07
COL7A1-201ENST00000328333 ATICP31939 592 aa15.52■□□□□ 0.07
COL7A1-201ENST00000328333 LSM14BQ9BX40 385 aaKnown RBP15.52■□□□□ 0.07
COL7A1-201ENST00000328333 LRWD1Q9UFC0 647 aa15.52■□□□□ 0.07
COL7A1-201ENST00000328333 MYH15Q9Y2K3 1946 aa15.52■□□□□ 0.07
COL7A1-201ENST00000328333 ABCC12Q96J65 1359 aa15.52■□□□□ 0.07
COL7A1-201ENST00000328333 CAV1Q03135 178 aa15.52■□□□□ 0.07
COL7A1-201ENST00000328333 MYOCDQ8IZQ8 938 aa15.52■□□□□ 0.07
COL7A1-201ENST00000328333 ZNF274Q96GC6 653 aaPredicted RBP15.52■□□□□ 0.07
COL7A1-201ENST00000328333 TTC1Q99614 292 aa15.52■□□□□ 0.07
COL7A1-201ENST00000328333 HNRNPCL2B2RXH8 293 aa15.52■□□□□ 0.07
COL7A1-201ENST00000328333 ADKP55263 362 aaKnown RBP15.52■□□□□ 0.07
COL7A1-201ENST00000328333 DIS3Q9Y2L1 958 aaKnown RBP15.52■□□□□ 0.07
COL7A1-201ENST00000328333 MRFAP1Q9Y605 127 aa15.52■□□□□ 0.07
COL7A1-201ENST00000328333 EMILIN1Q9Y6C2 1016 aa15.52■□□□□ 0.07
COL7A1-201ENST00000328333 LONP1P36776 959 aaKnown RBP15.51■□□□□ 0.07
COL7A1-201ENST00000328333 ECE1P42892 770 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 SPATA1Q5VX52 437 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 CAPRIN2Q6IMN6 1127 aaKnown RBP15.51■□□□□ 0.07
COL7A1-201ENST00000328333 SESTD1Q86VW0 696 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 HDAC11Q96DB2 347 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 RASSF10A6NK89 507 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 C17orf53Q8N3J3 647 aaPredicted RBP15.51■□□□□ 0.07
COL7A1-201ENST00000328333 NLRP3Q96P20 1036 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 PANX2Q96RD6 677 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 KIF2CQ99661 725 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 DIABLOQ9NR28 239 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 LAMC1P11047 1609 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 RARS2Q5T160 578 aaKnown RBP15.51■□□□□ 0.07
COL7A1-201ENST00000328333 SETDB2Q96T68 719 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 MKRN3Q13064 507 aaKnown RBP15.51■□□□□ 0.07
COL7A1-201ENST00000328333 RCN2Q14257 317 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 TERF2Q15554 542 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 DSCC1Q9BVC3 393 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 NACA2Q9H009 215 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 FSCBQ5H9T9 825 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 OTUD6AQ7L8S5 288 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 TRMT1LQ7Z2T5 733 aaKnown RBP15.51■□□□□ 0.07
COL7A1-201ENST00000328333 TRIML2Q8N7C3 387 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 SCYL1Q96KG9 808 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 CCDC159P0C7I6 412 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 TRAPPC10P48553 1259 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 PIK3AP1Q6ZUJ8 805 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 SNX29Q8TEQ0 813 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 MYCT1Q8N699 235 aa15.51■□□□□ 0.07
COL7A1-201ENST00000328333 FAM133BQ5BKY9 247 aaKnown RBP15.5■□□□□ 0.07
COL7A1-201ENST00000328333 NCAPH2Q6IBW4 605 aa15.5■□□□□ 0.07
COL7A1-201ENST00000328333 RMDN2Q96LZ7 410 aa15.5■□□□□ 0.07
COL7A1-201ENST00000328333 GTPBP6O43824 516 aaPredicted RBP15.5■□□□□ 0.07
COL7A1-201ENST00000328333 DMP1Q13316 513 aaPredicted RBP15.5■□□□□ 0.07
COL7A1-201ENST00000328333 APPBP2Q92624 585 aa15.5■□□□□ 0.07
COL7A1-201ENST00000328333 MTBPQ96DY7 904 aa15.5■□□□□ 0.07
COL7A1-201ENST00000328333 FGD4Q96M96 766 aa15.5■□□□□ 0.07
COL7A1-201ENST00000328333 SYNGAP1Q96PV0 1343 aa15.5■□□□□ 0.07
COL7A1-201ENST00000328333 MYO1CO00159 1063 aa15.5■□□□□ 0.07
COL7A1-201ENST00000328333 OR9Q1Q8NGQ5 310 aa15.5■□□□□ 0.07
COL7A1-201ENST00000328333 MDM2Q00987 491 aaPredicted RBP15.5■□□□□ 0.07
COL7A1-201ENST00000328333 CDC37L1Q7L3B6 337 aa15.5■□□□□ 0.07
COL7A1-201ENST00000328333 MCF2LO15068 1137 aa15.5■□□□□ 0.07
COL7A1-201ENST00000328333 RPSAP08865 295 aaKnown RBP15.5■□□□□ 0.07
COL7A1-201ENST00000328333 FAM186BQ8IYM0 893 aa15.5■□□□□ 0.07
COL7A1-201ENST00000328333 UBE4BO95155 1302 aa15.5■□□□□ 0.07
COL7A1-201ENST00000328333 ECEL1O95672 775 aa15.5■□□□□ 0.07
COL7A1-201ENST00000328333 DIS3L2Q8IYB7 885 aaKnown RBP15.5■□□□□ 0.07
COL7A1-201ENST00000328333 CEP70Q8NHQ1 597 aa15.5■□□□□ 0.07
COL7A1-201ENST00000328333 IQANK1A0A1B0GTG1 560 aa15.5■□□□□ 0.07
COL7A1-201ENST00000328333 SYCE1LA8MT33 242 aa15.5■□□□□ 0.07
COL7A1-201ENST00000328333 TADA3O75528 432 aa15.5■□□□□ 0.07
COL7A1-201ENST00000328333 TEX9Q8N6V9 391 aa15.5■□□□□ 0.07
COL7A1-201ENST00000328333 SIRT1Q96EB6 747 aa15.5■□□□□ 0.07
COL7A1-201ENST00000328333 ING2Q9H160 280 aa15.5■□□□□ 0.07
COL7A1-201ENST00000328333 PLS1Q14651 629 aa15.49■□□□□ 0.07
COL7A1-201ENST00000328333 NME9Q86XW9 330 aa15.49■□□□□ 0.07
COL7A1-201ENST00000328333 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.49■□□□□ 0.07
COL7A1-201ENST00000328333 DHTKD1Q96HY7 919 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-201ENST00000328333 AK8Q96MA6 479 aa15.49■□□□□ 0.07
COL7A1-201ENST00000328333 FOXP2O15409 715 aa15.49■□□□□ 0.07
COL7A1-201ENST00000328333 IGBP1P78318 339 aa15.49■□□□□ 0.07
COL7A1-201ENST00000328333 AKAP4Q5JQC9 854 aa15.49■□□□□ 0.07
COL7A1-201ENST00000328333 TMCO4Q5TGY1 634 aa15.49■□□□□ 0.07
COL7A1-201ENST00000328333 GSTA4O15217 222 aa15.49■□□□□ 0.07
COL7A1-201ENST00000328333 MSH2P43246 934 aa15.49■□□□□ 0.07
COL7A1-201ENST00000328333 KMT5BQ4FZB7 885 aa15.49■□□□□ 0.07
COL7A1-201ENST00000328333 ICA1LQ8NDH6 482 aa15.49■□□□□ 0.07
COL7A1-201ENST00000328333 EXOC1LA0A1B0GW35 172 aa15.49■□□□□ 0.07
COL7A1-201ENST00000328333 ESYT2A0FGR8 921 aa15.49■□□□□ 0.07
COL7A1-201ENST00000328333 BFSP1Q12934 665 aa15.49■□□□□ 0.07
COL7A1-201ENST00000328333 TEX11Q8IYF3 940 aa15.49■□□□□ 0.07
COL7A1-201ENST00000328333 ITGB1BP2Q9UKP3 347 aa15.49■□□□□ 0.07
COL7A1-201ENST00000328333 HNRNPRO43390 633 aaKnown RBP15.49■□□□□ 0.07
COL7A1-201ENST00000328333 ESRRBO95718 433 aa15.49■□□□□ 0.07
COL7A1-201ENST00000328333 ANAPC5Q9UJX4 755 aa15.49■□□□□ 0.07
COL7A1-201ENST00000328333 CNTRLQ7Z7A1 2325 aa15.49■□□□□ 0.07
COL7A1-201ENST00000328333 CHEK2O96017 543 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms