RNA–Protein interactions for RNA: ENST00000327331.2

CDCA8-201, Transcript of cell division cycle associated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA8, Length 2,303 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8-201ENST00000327331 GRIN3BO60391 1043 aa13.19□□□□□ -0.3
CDCA8-201ENST00000327331 SMARCA1P28370 1054 aa13.19□□□□□ -0.3
CDCA8-201ENST00000327331 FMR1Q06787 632 aaKnown RBP eCLIP13.19□□□□□ -0.3
CDCA8-201ENST00000327331 SPP2Q13103 211 aa13.19□□□□□ -0.3
CDCA8-201ENST00000327331 PRR12Q9ULL5 1215 aa13.19□□□□□ -0.3
CDCA8-201ENST00000327331 STAT2P52630 851 aa13.19□□□□□ -0.3
CDCA8-201ENST00000327331 TERF2Q15554 542 aa13.19□□□□□ -0.3
CDCA8-201ENST00000327331 TTC38Q5R3I4 469 aa13.19□□□□□ -0.3
CDCA8-201ENST00000327331 AXDND1Q5T1B0 1012 aaPredicted RBP13.19□□□□□ -0.3
CDCA8-201ENST00000327331 CKAP2LQ8IYA6 745 aa13.19□□□□□ -0.3
CDCA8-201ENST00000327331 CNKSR2Q8WXI2 1034 aa13.19□□□□□ -0.3
CDCA8-201ENST00000327331 ERCC4Q92889 916 aaPredicted RBP13.19□□□□□ -0.3
CDCA8-201ENST00000327331 C6orf50Q9HD87 102 aa13.19□□□□□ -0.3
CDCA8-201ENST00000327331 PCDHA1Q9Y5I3 950 aa13.19□□□□□ -0.3
CDCA8-201ENST00000327331 ZHX2Q9Y6X8 837 aa13.19□□□□□ -0.3
CDCA8-201ENST00000327331 ATAD5Q96QE3 1844 aa13.19□□□□□ -0.3
CDCA8-201ENST00000327331 SMTNL1A8MU46 457 aa13.18□□□□□ -0.3
CDCA8-201ENST00000327331 POTECB2RU33 542 aa13.18□□□□□ -0.3
CDCA8-201ENST00000327331 USP17L15C9J2P7 530 aa13.18□□□□□ -0.3
CDCA8-201ENST00000327331 USP17L13C9JLJ4 530 aa13.18□□□□□ -0.3
CDCA8-201ENST00000327331 USP17L11C9JVI0 530 aa13.18□□□□□ -0.3
CDCA8-201ENST00000327331 USP17L18D6R9N7 530 aa13.18□□□□□ -0.3
CDCA8-201ENST00000327331 USP17L22D6RA61 530 aa13.18□□□□□ -0.3
CDCA8-201ENST00000327331 USP17L17D6RBQ6 530 aa13.18□□□□□ -0.3
CDCA8-201ENST00000327331 USP17L19D6RCP7 530 aa13.18□□□□□ -0.3
CDCA8-201ENST00000327331 USP17L20D6RJB6 530 aa13.18□□□□□ -0.3
CDCA8-201ENST00000327331 AP5Z1O43299 807 aa13.18□□□□□ -0.3
CDCA8-201ENST00000327331 NDUFA8P51970 172 aa13.18□□□□□ -0.3
CDCA8-201ENST00000327331 USP17L24Q0WX57 530 aa13.18□□□□□ -0.3
CDCA8-201ENST00000327331 USP17L6PQ6QN14 398 aa13.18□□□□□ -0.3
CDCA8-201ENST00000327331 SCYL3Q8IZE3 742 aa13.18□□□□□ -0.3
CDCA8-201ENST00000327331 SPC24Q8NBT2 197 aa13.18□□□□□ -0.3
CDCA8-201ENST00000327331 KLRG1Q96E93 195 aa13.18□□□□□ -0.3
CDCA8-201ENST00000327331 MTMR8Q96EF0 704 aa13.18□□□□□ -0.3
CDCA8-201ENST00000327331 PICK1Q9NRD5 415 aa13.18□□□□□ -0.3
CDCA8-201ENST00000327331 USP2O75604 605 aaPredicted RBP13.18□□□□□ -0.3
CDCA8-201ENST00000327331 PTPRAP18433 802 aa13.18□□□□□ -0.3
CDCA8-201ENST00000327331 ADCY7P51828 1080 aa13.18□□□□□ -0.3
CDCA8-201ENST00000327331 PLCD3Q8N3E9 789 aa13.18□□□□□ -0.3
CDCA8-201ENST00000327331 L3MBTL3Q96JM7 780 aaPredicted RBP13.18□□□□□ -0.3
CDCA8-201ENST00000327331 TIGD1Q96MW7 591 aa13.18□□□□□ -0.3
CDCA8-201ENST00000327331 SLC20A2Q08357 652 aa13.17□□□□□ -0.3
CDCA8-201ENST00000327331 ADALQ6DHV7 355 aa13.17□□□□□ -0.3
CDCA8-201ENST00000327331 SHC4Q6S5L8 630 aa13.17□□□□□ -0.3
CDCA8-201ENST00000327331 REXO1Q8N1G1 1221 aaKnown RBP13.17□□□□□ -0.3
CDCA8-201ENST00000327331 KIF18AQ8NI77 898 aa13.17□□□□□ -0.3
CDCA8-201ENST00000327331 CCDC12Q8WUD4 166 aaPredicted RBP13.17□□□□□ -0.3
CDCA8-201ENST00000327331 MRPS27Q92552 414 aaKnown RBP13.17□□□□□ -0.3
CDCA8-201ENST00000327331 UIMC1Q96RL1 719 aa13.17□□□□□ -0.3
CDCA8-201ENST00000327331 TANGO6Q9C0B7 1094 aa13.17□□□□□ -0.3
CDCA8-201ENST00000327331 TAF1DQ9H5J8 278 aaPredicted RBP13.17□□□□□ -0.3
CDCA8-201ENST00000327331 SH2D4AQ9H788 454 aa13.17□□□□□ -0.3
CDCA8-201ENST00000327331 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.17□□□□□ -0.3
CDCA8-201ENST00000327331 CLEC11AQ9Y240 323 aa13.17□□□□□ -0.3
CDCA8-201ENST00000327331 A0A087WWV3 80 aa13.17□□□□□ -0.3
CDCA8-201ENST00000327331 GNA11P29992 359 aa13.17□□□□□ -0.3
CDCA8-201ENST00000327331 HMGCS2P54868 508 aa13.17□□□□□ -0.3
CDCA8-201ENST00000327331 SNW1Q13573 536 aaKnown RBP13.17□□□□□ -0.3
CDCA8-201ENST00000327331 LETM2Q2VYF4 491 aa13.17□□□□□ -0.3
CDCA8-201ENST00000327331 SUPT20HL1Q3ZLR7 823 aa13.17□□□□□ -0.3
CDCA8-201ENST00000327331 CCDC73Q6ZRK6 1079 aa13.17□□□□□ -0.3
CDCA8-201ENST00000327331 USP49Q70CQ1 688 aa13.17□□□□□ -0.3
CDCA8-201ENST00000327331 DAGLBQ8NCG7 672 aa13.17□□□□□ -0.3
CDCA8-201ENST00000327331 ZNF526Q8TF50 670 aaPredicted RBP13.17□□□□□ -0.3
CDCA8-201ENST00000327331 FUCA2Q9BTY2 467 aa13.17□□□□□ -0.3
CDCA8-201ENST00000327331 EMILIN3Q9NT22 766 aa13.17□□□□□ -0.3
CDCA8-201ENST00000327331 ZNF112Q9UJU3 913 aa13.17□□□□□ -0.3
CDCA8-201ENST00000327331 FBXO2Q9UK22 296 aaPredicted RBP13.17□□□□□ -0.3
CDCA8-201ENST00000327331 PFKFB1P16118 471 aa13.16□□□□□ -0.3
CDCA8-201ENST00000327331 PTGDRQ13258 359 aa13.16□□□□□ -0.3
CDCA8-201ENST00000327331 TTLL12Q14166 644 aaPredicted RBP13.16□□□□□ -0.3
CDCA8-201ENST00000327331 FBXO11Q86XK2 927 aa13.16□□□□□ -0.3
CDCA8-201ENST00000327331 KRT222Q8N1A0 295 aa13.16□□□□□ -0.3
CDCA8-201ENST00000327331 TBCKQ8TEA7 893 aa13.16□□□□□ -0.3
CDCA8-201ENST00000327331 CDCA5Q96FF9 252 aa13.16□□□□□ -0.3
CDCA8-201ENST00000327331 NUP62CLQ9H1M0 184 aa13.16□□□□□ -0.3
CDCA8-201ENST00000327331 PSTPIP2Q9H939 334 aa13.16□□□□□ -0.3
CDCA8-201ENST00000327331 PITPNM2Q9BZ72 1349 aa13.16□□□□□ -0.3
CDCA8-201ENST00000327331 VCAM1P19320 739 aa13.16□□□□□ -0.3
CDCA8-201ENST00000327331 HOXA13P31271 388 aaPredicted RBP13.16□□□□□ -0.3
CDCA8-201ENST00000327331 VGLL4Q14135 290 aa13.16□□□□□ -0.3
CDCA8-201ENST00000327331 MAP1SQ66K74 1059 aaPredicted RBP13.16□□□□□ -0.3
CDCA8-201ENST00000327331 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.16□□□□□ -0.3
CDCA8-201ENST00000327331 USP50Q70EL3 339 aaPredicted RBP13.16□□□□□ -0.3
CDCA8-201ENST00000327331 KRI1Q8N9T8 703 aaKnown RBP13.16□□□□□ -0.3
CDCA8-201ENST00000327331 CLMNQ96JQ2 1002 aa13.16□□□□□ -0.3
CDCA8-201ENST00000327331 CSRNP2Q9H175 543 aa13.16□□□□□ -0.3
CDCA8-201ENST00000327331 ZNF408Q9H9D4 720 aa13.16□□□□□ -0.3
CDCA8-201ENST00000327331 PPP2R3BQ9Y5P8 575 aa13.16□□□□□ -0.3
CDCA8-201ENST00000327331 VWA3AA6NCI4 1184 aa13.15□□□□□ -0.3
CDCA8-201ENST00000327331 TRAF5O00463 557 aa13.15□□□□□ -0.3
CDCA8-201ENST00000327331 CCNT1O60563 726 aaKnown RBP13.15□□□□□ -0.3
CDCA8-201ENST00000327331 PPP6R2O75170 966 aa13.15□□□□□ -0.3
CDCA8-201ENST00000327331 NONOQ15233 471 aaKnown RBP eCLIP13.15□□□□□ -0.3
CDCA8-201ENST00000327331 BTNL9Q6UXG8 535 aa13.15□□□□□ -0.3
CDCA8-201ENST00000327331 ENGASEQ8NFI3 743 aa13.15□□□□□ -0.3
CDCA8-201ENST00000327331 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.15□□□□□ -0.31e-8■□□□□ 8.2
CDCA8-201ENST00000327331 WNK4Q96J92 1243 aa13.15□□□□□ -0.3
CDCA8-201ENST00000327331 AMNQ9BXJ7 453 aa13.15□□□□□ -0.3
CDCA8-201ENST00000327331 KIAA1683Q9H0B3 1180 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms