RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 C9orf50Q5SZB4 431 aa16.63■□□□□ 0.25
RPAIN-201ENST00000327154 SYDE2Q5VT97 1194 aa16.63■□□□□ 0.25
RPAIN-201ENST00000327154 NSMFQ6X4W1 530 aa16.63■□□□□ 0.25
RPAIN-201ENST00000327154 NOL8Q76FK4 1167 aaKnown RBP16.63■□□□□ 0.25
RPAIN-201ENST00000327154 VTI1AQ96AJ9 217 aa16.63■□□□□ 0.25
RPAIN-201ENST00000327154 RANBP17Q9H2T7 1088 aaKnown RBP16.63■□□□□ 0.25
RPAIN-201ENST00000327154 RNF41Q9H4P4 317 aaPredicted RBP16.63■□□□□ 0.25
RPAIN-201ENST00000327154 DIAPH3Q9NSV4 1193 aa16.63■□□□□ 0.25
RPAIN-201ENST00000327154 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.62■□□□□ 0.25
RPAIN-201ENST00000327154 DCDC2CA8MYV0 355 aa16.62■□□□□ 0.25
RPAIN-201ENST00000327154 ASGR1P07306 291 aa16.62■□□□□ 0.25
RPAIN-201ENST00000327154 PDHBP11177 359 aa16.62■□□□□ 0.25
RPAIN-201ENST00000327154 CST5P28325 142 aaPredicted RBP16.62■□□□□ 0.25
RPAIN-201ENST00000327154 IRX6P78412 446 aaPredicted RBP16.62■□□□□ 0.25
RPAIN-201ENST00000327154 TNFAIP2Q03169 654 aa16.62■□□□□ 0.25
RPAIN-201ENST00000327154 ANKRD33Q7Z3H0 272 aa16.62■□□□□ 0.25
RPAIN-201ENST00000327154 PCSK9Q8NBP7 692 aaKnown RBP16.62■□□□□ 0.25
RPAIN-201ENST00000327154 GLT1D1Q96MS3 346 aa16.62■□□□□ 0.25
RPAIN-201ENST00000327154 PURBQ96QR8 312 aaKnown RBP16.62■□□□□ 0.25
RPAIN-201ENST00000327154 ZKSCAN3Q9BRR0 538 aa16.62■□□□□ 0.25
RPAIN-201ENST00000327154 UPF3AQ9H1J1 476 aaKnown RBP16.62■□□□□ 0.25
RPAIN-201ENST00000327154 TMEM39AQ9NV64 488 aa16.62■□□□□ 0.25
RPAIN-201ENST00000327154 MTMR10Q9NXD2 777 aa16.62■□□□□ 0.25
RPAIN-201ENST00000327154 ASTN1O14525 1302 aa16.62■□□□□ 0.25
RPAIN-201ENST00000327154 KIAA0355O15063 1070 aa16.61■□□□□ 0.25
RPAIN-201ENST00000327154 RAG1P15918 1043 aa16.61■□□□□ 0.25
RPAIN-201ENST00000327154 FAAP100Q0VG06 881 aa16.61■□□□□ 0.25
RPAIN-201ENST00000327154 BAATQ14032 418 aaPredicted RBP16.61■□□□□ 0.25
RPAIN-201ENST00000327154 EEPD1Q7L9B9 569 aa16.61■□□□□ 0.25
RPAIN-201ENST00000327154 ESR2Q92731 530 aa16.61■□□□□ 0.25
RPAIN-201ENST00000327154 TOX2Q96NM4 488 aa16.61■□□□□ 0.25
RPAIN-201ENST00000327154 ELP1O95163 1332 aa16.61■□□□□ 0.25
RPAIN-201ENST00000327154 NEDD4P46934 1319 aa16.61■□□□□ 0.25
RPAIN-201ENST00000327154 HIP1O00291 1037 aa16.6■□□□□ 0.25
RPAIN-201ENST00000327154 CTAGE5O15320 804 aa16.6■□□□□ 0.25
RPAIN-201ENST00000327154 BEX3Q00994 111 aa16.6■□□□□ 0.25
RPAIN-201ENST00000327154 ZNF543Q08ER8 600 aa16.6■□□□□ 0.25
RPAIN-201ENST00000327154 PDGFCQ9NRA1 345 aa16.6■□□□□ 0.25
RPAIN-201ENST00000327154 NFIBO00712 420 aa16.59■□□□□ 0.25
RPAIN-201ENST00000327154 KDM4AO75164 1064 aa16.59■□□□□ 0.25
RPAIN-201ENST00000327154 SMPD1P17405 629 aa16.59■□□□□ 0.25
RPAIN-201ENST00000327154 PTGS1P23219 599 aa16.59■□□□□ 0.25
RPAIN-201ENST00000327154 CDK7P50613 346 aa16.59■□□□□ 0.25
RPAIN-201ENST00000327154 EPHB4P54760 987 aa16.59■□□□□ 0.25
RPAIN-201ENST00000327154 NKX3-2P78367 333 aa16.59■□□□□ 0.25
RPAIN-201ENST00000327154 IQSEC1Q6DN90 963 aa16.59■□□□□ 0.25
RPAIN-201ENST00000327154 TAPT1Q6NXT6 567 aa16.59■□□□□ 0.25
RPAIN-201ENST00000327154 DGKHQ86XP1 1220 aa16.59■□□□□ 0.25
RPAIN-201ENST00000327154 SLC17A8Q8NDX2 589 aa16.59■□□□□ 0.25
RPAIN-201ENST00000327154 GNEQ9Y223 722 aaKnown RBP16.59■□□□□ 0.25
RPAIN-201ENST00000327154 PTPDC1A2A3K4 754 aa16.58■□□□□ 0.24
RPAIN-201ENST00000327154 DYNC1LI2O43237 492 aaPredicted RBP16.58■□□□□ 0.24
RPAIN-201ENST00000327154 GOLGA8HP0CJ92 632 aa16.58■□□□□ 0.24
RPAIN-201ENST00000327154 SNHG28P0DPA3 235 aa16.58■□□□□ 0.24
RPAIN-201ENST00000327154 TMEM63BQ5T3F8 832 aa16.58■□□□□ 0.24
RPAIN-201ENST00000327154 FAM109BQ6ICB4 259 aaPredicted RBP16.58■□□□□ 0.24
RPAIN-201ENST00000327154 TLK2Q86UE8 772 aa16.58■□□□□ 0.24
RPAIN-201ENST00000327154 FBXO16Q8IX29 292 aaPredicted RBP16.58■□□□□ 0.24
RPAIN-201ENST00000327154 CLEC4DQ8WXI8 215 aa16.58■□□□□ 0.24
RPAIN-201ENST00000327154 DSCC1Q9BVC3 393 aa16.58■□□□□ 0.24
RPAIN-201ENST00000327154 AP5M1Q9H0R1 490 aa16.58■□□□□ 0.24
RPAIN-201ENST00000327154 A0A0U1RQG5 324 aaPredicted RBP16.57■□□□□ 0.24
RPAIN-201ENST00000327154 B4E1Z4 1266 aa16.57■□□□□ 0.24
RPAIN-201ENST00000327154 ARVCFO00192 962 aa16.57■□□□□ 0.24
RPAIN-201ENST00000327154 FPGSQ05932 587 aa16.57■□□□□ 0.24
RPAIN-201ENST00000327154 IMMTQ16891 758 aaKnown RBP16.57■□□□□ 0.24
RPAIN-201ENST00000327154 CXCL17Q6UXB2 119 aa16.57■□□□□ 0.24
RPAIN-201ENST00000327154 KIAA1211Q6ZU35 1233 aa16.57■□□□□ 0.24
RPAIN-201ENST00000327154 IQCA1Q86XH1 822 aa16.57■□□□□ 0.24
RPAIN-201ENST00000327154 MORC4Q8TE76 937 aa16.57■□□□□ 0.24
RPAIN-201ENST00000327154 FAM161BQ96MY7 647 aa16.57■□□□□ 0.24
RPAIN-201ENST00000327154 UBA5Q9GZZ9 404 aa16.57■□□□□ 0.24
RPAIN-201ENST00000327154 ZSWIM5Q9P217 1185 aa16.57■□□□□ 0.24
RPAIN-201ENST00000327154 ADD3Q9UEY8 706 aaKnown RBP16.57■□□□□ 0.24
RPAIN-201ENST00000327154 CTNNA3Q9UI47 895 aa16.57■□□□□ 0.24
RPAIN-201ENST00000327154 PNMA2Q9UL42 364 aa16.57■□□□□ 0.24
RPAIN-201ENST00000327154 STXBP5LQ9Y2K9 1186 aa16.57■□□□□ 0.24
RPAIN-201ENST00000327154 MROH7Q68CQ1 1323 aa16.56■□□□□ 0.24
RPAIN-201ENST00000327154 TIMP1P01033 207 aa16.56■□□□□ 0.24
RPAIN-201ENST00000327154 CALML3P27482 149 aa16.56■□□□□ 0.24
RPAIN-201ENST00000327154 PDE4AP27815 886 aa16.56■□□□□ 0.24
RPAIN-201ENST00000327154 ALDH5A1P51649 535 aaPredicted RBP16.56■□□□□ 0.24
RPAIN-201ENST00000327154 FSCN1Q16658 493 aaKnown RBP16.56■□□□□ 0.24
RPAIN-201ENST00000327154 CCDC178Q5BJE1 867 aa16.56■□□□□ 0.24
RPAIN-201ENST00000327154 GPATCH4Q5T3I0 446 aaKnown RBP16.56■□□□□ 0.24
RPAIN-201ENST00000327154 RNF207Q6ZRF8 634 aa16.56■□□□□ 0.24
RPAIN-201ENST00000327154 PNMA1Q8ND90 353 aa16.56■□□□□ 0.24
RPAIN-201ENST00000327154 ANKS1AQ92625 1134 aa16.56■□□□□ 0.24
RPAIN-201ENST00000327154 ZSCAN10Q96SZ4 725 aaPredicted RBP16.56■□□□□ 0.24
RPAIN-201ENST00000327154 CPVLQ9H3G5 476 aa16.56■□□□□ 0.24
RPAIN-201ENST00000327154 KAT14Q9H8E8 782 aa16.56■□□□□ 0.24
RPAIN-201ENST00000327154 VTA1Q9NP79 307 aa16.56■□□□□ 0.24
RPAIN-201ENST00000327154 TBX21Q9UL17 535 aa16.56■□□□□ 0.24
RPAIN-201ENST00000327154 LTBP2Q14767 1821 aa16.55■□□□□ 0.24
RPAIN-201ENST00000327154 NT5C2P49902 561 aa16.55■□□□□ 0.24
RPAIN-201ENST00000327154 SLC30A10Q6XR72 485 aa16.55■□□□□ 0.24
RPAIN-201ENST00000327154 RNPC3Q96LT9 517 aaKnown RBP16.55■□□□□ 0.24
RPAIN-201ENST00000327154 IL25Q9H293 177 aa16.55■□□□□ 0.24
RPAIN-201ENST00000327154 Q9Y3F1 56 aa16.55■□□□□ 0.24
RPAIN-201ENST00000327154 WDR19Q8NEZ3 1342 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms