RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	AMN	Q9BXJ7	453 aa		13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	KANSL2	Q9H9L4	492 aa		13.16	□□□□□ -0.3
DDR1-223	ENST00000324771	EXOC3	O60645	756 aa		13.15	□□□□□ -0.3
DDR1-223	ENST00000324771	PFKFB3	Q16875	520 aa	Predicted RBP	13.15	□□□□□ -0.3
DDR1-223	ENST00000324771	FAM26F	Q5R3K3	315 aa		13.15	□□□□□ -0.3
DDR1-223	ENST00000324771	GBP3	Q9H0R5	595 aa		13.15	□□□□□ -0.3
DDR1-223	ENST00000324771	PI4KB	Q9UBF8	816 aa		13.15	□□□□□ -0.3
DDR1-223	ENST00000324771	SOWAHD	A6NJG2	315 aa		13.15	□□□□□ -0.3
DDR1-223	ENST00000324771	ERLIN2	O94905	339 aa		13.15	□□□□□ -0.3
DDR1-223	ENST00000324771	ARHGAP27	Q6ZUM4	889 aa		13.15	□□□□□ -0.3
DDR1-223	ENST00000324771	FBXO33	Q7Z6M2	555 aa		13.15	□□□□□ -0.3
DDR1-223	ENST00000324771	PLA2G4D	Q86XP0	818 aa		13.15	□□□□□ -0.3
DDR1-223	ENST00000324771	OR8K1	Q8NGG5	319 aa		13.15	□□□□□ -0.3
DDR1-223	ENST00000324771	JAKMIP2	Q96AA8	810 aa		13.15	□□□□□ -0.3
DDR1-223	ENST00000324771	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.15	□□□□□ -0.3
DDR1-223	ENST00000324771	METTL16	Q86W50	562 aa	Known RBP	13.15	□□□□□ -0.3
DDR1-223	ENST00000324771	MYOCD	Q8IZQ8	938 aa		13.15	□□□□□ -0.3
DDR1-223	ENST00000324771	ACRBP	Q8NEB7	543 aa		13.15	□□□□□ -0.3
DDR1-223	ENST00000324771	TUBGCP2	Q9BSJ2	902 aa		13.15	□□□□□ -0.3
DDR1-223	ENST00000324771	GTPBP4	Q9BZE4	634 aa	Known RBP	13.15	□□□□□ -0.3
DDR1-223	ENST00000324771	SH2D4A	Q9H788	454 aa		13.15	□□□□□ -0.3
DDR1-223	ENST00000324771	PANK4	Q9NVE7	773 aa		13.15	□□□□□ -0.3
DDR1-223	ENST00000324771	DAGLA	Q9Y4D2	1042 aa		13.15	□□□□□ -0.3
DDR1-223	ENST00000324771	JCAD	Q9P266	1359 aa		13.15	□□□□□ -0.3
DDR1-223	ENST00000324771		H0YHG0	523 aa		13.15	□□□□□ -0.31
DDR1-223	ENST00000324771	TEX33	O43247	280 aa		13.15	□□□□□ -0.31
DDR1-223	ENST00000324771	KRT222	Q8N1A0	295 aa		13.15	□□□□□ -0.31
DDR1-223	ENST00000324771	SUPT20H	Q8NEM7	779 aa		13.15	□□□□□ -0.31
DDR1-223	ENST00000324771	LARP4B	Q92615	738 aa	Known RBP	13.15	□□□□□ -0.31
DDR1-223	ENST00000324771	TIGD1	Q96MW7	591 aa		13.15	□□□□□ -0.31
DDR1-223	ENST00000324771	RFX7	Q2KHR2	1363 aa		13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	TDP2	O95551	362 aa		13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	SLURP2	P0DP57	97 aa		13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	CYP27A1	Q02318	531 aa		13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	TMTC1	Q8IUR5	882 aa		13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	CHURC1	Q8WUH1	139 aa		13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	TBC1D5	Q92609	795 aa		13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	ERO1A	Q96HE7	468 aa		13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	CLIC2	O15247	247 aa		13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	NEFH	P12036	1026 aa		13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	BMP3	P12645	472 aa		13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	EEF2	P13639	858 aa	Known RBP	13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	FGFR2	P21802	821 aa		13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	RPL13	P26373	211 aa	Known RBP	13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	CDC37	Q16543	378 aa	Predicted RBP	13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	ASPRV1	Q53RT3	343 aa		13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	GPATCH4	Q5T3I0	446 aa	Known RBP	13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	MAATS1	Q7Z4T9	603 aa		13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	CCDC17	Q96LX7	622 aa		13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	CCPG1	Q9ULG6	757 aa		13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	UBR1	Q8IWV7	1749 aa		13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	ECE2	O60344	883 aa		13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	BIRC3	Q13489	604 aa		13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	LLGL1	Q15334	1064 aa		13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	KMT5B	Q4FZB7	885 aa		13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	CNOT6L	Q96LI5	555 aa	Known RBP	13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	RABEP2	Q9H5N1	569 aa		13.14	□□□□□ -0.31
DDR1-223	ENST00000324771	GSTTP1	A0A1W2PQM5	241 aa		13.13	□□□□□ -0.31
DDR1-223	ENST00000324771	BUB1	O43683	1085 aa		13.13	□□□□□ -0.31
DDR1-223	ENST00000324771	EPB41	P11171	864 aa	Known RBP	13.13	□□□□□ -0.31
DDR1-223	ENST00000324771	PPP1R13B	Q96KQ4	1090 aa		13.13	□□□□□ -0.31
DDR1-223	ENST00000324771	TRIML1	Q8N9V2	468 aa		13.13	□□□□□ -0.31
DDR1-223	ENST00000324771	EHBP1	Q8NDI1	1231 aa		13.13	□□□□□ -0.31
DDR1-223	ENST00000324771	KCNB2	Q92953	911 aa		13.13	□□□□□ -0.31
DDR1-223	ENST00000324771	CCDC127	Q96BQ5	260 aa		13.13	□□□□□ -0.31
DDR1-223	ENST00000324771	NAPG	Q99747	312 aa	Predicted RBP	13.13	□□□□□ -0.31
DDR1-223	ENST00000324771	SH2D3A	Q9BRG2	576 aa		13.13	□□□□□ -0.31
DDR1-223	ENST00000324771	MYO6	Q9UM54	1294 aa		13.13	□□□□□ -0.31
DDR1-223	ENST00000324771	FRMD4B	Q9Y2L6	1034 aa		13.13	□□□□□ -0.31
DDR1-223	ENST00000324771	TRAPPC10	P48553	1259 aa		13.13	□□□□□ -0.31
DDR1-223	ENST00000324771	CDR1	P51861	262 aa		13.13	□□□□□ -0.31
DDR1-223	ENST00000324771	IFFO1	Q0D2I5	559 aa		13.13	□□□□□ -0.31
DDR1-223	ENST00000324771	POTED	Q86YR6	584 aa		13.13	□□□□□ -0.31
DDR1-223	ENST00000324771		H7C1D1	291 aa		13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	POLR2F	P61218	127 aa	Known RBP	13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	KLHL30	Q0D2K2	578 aa		13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	ADAM9	Q13443	819 aa		13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	MAP9	Q49MG5	647 aa		13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	ZNF772	Q68DY9	489 aa	Predicted RBP	13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	BARGIN	Q6ZT62	677 aa		13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	TTLL6	Q8N841	843 aa		13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	PIGO	Q8TEQ8	1089 aa		13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	LSM14B	Q9BX40	385 aa	Known RBP	13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	TRIM31	Q9BZY9	425 aa		13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	CAMTA1	Q9Y6Y1	1673 aa		13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	IKBKB	O14920	756 aa		13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	POLR2M	P0CAP2	368 aa		13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	ABCB4	P21439	1286 aa		13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	EAPP	Q56P03	285 aa	Predicted RBP	13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	EEPD1	Q7L9B9	569 aa		13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	LRP10	Q7Z4F1	713 aa		13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	DISC1	Q9NRI5	854 aa		13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	IFT172	Q9UG01	1749 aa		13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	PRAMEF18	Q5VWM3	479 aa		13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	NBPF11	Q86T75	865 aa		13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	DHX40	Q8IX18	779 aa	Known RBP	13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	ENOX1	Q8TC92	643 aa	Known RBP	13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	CERK	Q8TCT0	537 aa		13.12	□□□□□ -0.31
DDR1-223	ENST00000324771	POLL	Q9UGP5	575 aa		13.12	□□□□□ -0.31

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