RNA–Protein interactions for RNA: ENST00000324554.9

USHBP1-202, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 2,402 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-202ENST00000324554 KCNJ12Q14500 433 aa18.08■□□□□ 0.49
USHBP1-202ENST00000324554 ZNF569Q5MCW4 686 aa18.08■□□□□ 0.49
USHBP1-202ENST00000324554 VPS16Q9H269 839 aa18.08■□□□□ 0.49
USHBP1-202ENST00000324554 TAB2Q9NYJ8 693 aa18.08■□□□□ 0.49
USHBP1-202ENST00000324554 COL11A2P13942 1736 aaPredicted RBP18.08■□□□□ 0.48
USHBP1-202ENST00000324554 H0YIN7 160 aa18.08■□□□□ 0.48
USHBP1-202ENST00000324554 TFRCP02786 760 aaKnown RBP18.08■□□□□ 0.48
USHBP1-202ENST00000324554 SRGAP1Q7Z6B7 1085 aa18.08■□□□□ 0.48
USHBP1-202ENST00000324554 FUT8Q9BYC5 575 aa18.08■□□□□ 0.48
USHBP1-202ENST00000324554 DBNDD1Q9H9R9 158 aa18.08■□□□□ 0.48
USHBP1-202ENST00000324554 ARFGAP3Q9NP61 516 aa18.08■□□□□ 0.48
USHBP1-202ENST00000324554 ZCCHC17Q9NP64 241 aaKnown RBP18.08■□□□□ 0.48
USHBP1-202ENST00000324554 PUF60Q9UHX1 559 aaKnown RBP18.08■□□□□ 0.48
USHBP1-202ENST00000324554 LDHCP07864 332 aa18.07■□□□□ 0.48
USHBP1-202ENST00000324554 GOLGA8HP0CJ92 632 aa18.07■□□□□ 0.48
USHBP1-202ENST00000324554 CHMP4BP1P59074 171 aa18.07■□□□□ 0.48
USHBP1-202ENST00000324554 CREBRFQ8IUR6 639 aa18.07■□□□□ 0.48
USHBP1-202ENST00000324554 ADSSL1Q8N142 457 aa18.07■□□□□ 0.48
USHBP1-202ENST00000324554 ANKRD20A12PQ8NF67 263 aa18.07■□□□□ 0.48
USHBP1-202ENST00000324554 ABHD10Q9NUJ1 306 aa18.07■□□□□ 0.48
USHBP1-202ENST00000324554 CDC23Q9UJX2 597 aa18.07■□□□□ 0.48
USHBP1-202ENST00000324554 SNED1Q8TER0 1413 aa18.06■□□□□ 0.48
USHBP1-202ENST00000324554 G3V3G9 751 aa18.06■□□□□ 0.48
USHBP1-202ENST00000324554 BTDP43251 543 aa18.06■□□□□ 0.48
USHBP1-202ENST00000324554 DCAF8Q5TAQ9 597 aa18.06■□□□□ 0.48
USHBP1-202ENST00000324554 RASSF8Q8NHQ8 419 aa18.06■□□□□ 0.48
USHBP1-202ENST00000324554 CCSER1Q9C0I3 900 aa18.06■□□□□ 0.48
USHBP1-202ENST00000324554 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.06■□□□□ 0.48
USHBP1-202ENST00000324554 NRXN2Q9P2S2 1712 aa18.06■□□□□ 0.48
USHBP1-202ENST00000324554 TRIM49BA6NDI0 452 aa18.06■□□□□ 0.48
USHBP1-202ENST00000324554 KLRF2D3W0D1 207 aa18.06■□□□□ 0.48
USHBP1-202ENST00000324554 LAD1O00515 517 aa18.06■□□□□ 0.48
USHBP1-202ENST00000324554 OAS2P29728 719 aaKnown RBP18.06■□□□□ 0.48
USHBP1-202ENST00000324554 UBA7P41226 1012 aa18.06■□□□□ 0.48
USHBP1-202ENST00000324554 SMC1AQ14683 1233 aaKnown RBP18.06■□□□□ 0.48
USHBP1-202ENST00000324554 SLC35F6Q8N357 371 aa18.06■□□□□ 0.48
USHBP1-202ENST00000324554 LZTS2Q9BRK4 669 aa18.06■□□□□ 0.48
USHBP1-202ENST00000324554 CPVLQ9H3G5 476 aa18.06■□□□□ 0.48
USHBP1-202ENST00000324554 ANKZF1Q9H8Y5 726 aa18.06■□□□□ 0.48
USHBP1-202ENST00000324554 CDK5RAP2Q96SN8 1893 aa18.05■□□□□ 0.48
USHBP1-202ENST00000324554 KLRC4O43908 158 aa18.05■□□□□ 0.48
USHBP1-202ENST00000324554 KCNB1Q14721 858 aa18.05■□□□□ 0.48
USHBP1-202ENST00000324554 IRF2BP1Q8IU81 584 aa18.05■□□□□ 0.48
USHBP1-202ENST00000324554 TMTC1Q8IUR5 882 aa18.05■□□□□ 0.48
USHBP1-202ENST00000324554 LRRC15Q8TF66 581 aa18.05■□□□□ 0.48
USHBP1-202ENST00000324554 SPZ1Q9BXG8 430 aa18.05■□□□□ 0.48
USHBP1-202ENST00000324554 ZMYND12Q9H0C1 365 aa18.05■□□□□ 0.48
USHBP1-202ENST00000324554 TMX4Q9H1E5 349 aaPredicted RBP18.05■□□□□ 0.48
USHBP1-202ENST00000324554 ZNF287Q9HBT7 754 aa18.05■□□□□ 0.48
USHBP1-202ENST00000324554 KBTBD4Q9NVX7 518 aa18.05■□□□□ 0.48
USHBP1-202ENST00000324554 H7C1D1 291 aa18.04■□□□□ 0.48
USHBP1-202ENST00000324554 MYL1P05976 194 aa18.04■□□□□ 0.48
USHBP1-202ENST00000324554 PRPHP41219 470 aa18.04■□□□□ 0.48
USHBP1-202ENST00000324554 SCNN1DP51172 638 aa18.04■□□□□ 0.48
USHBP1-202ENST00000324554 PMS1P54277 932 aaKnown RBP18.04■□□□□ 0.48
USHBP1-202ENST00000324554 TRIM14Q14142 442 aa18.04■□□□□ 0.48
USHBP1-202ENST00000324554 LONRF2Q1L5Z9 754 aa18.04■□□□□ 0.48
USHBP1-202ENST00000324554 C16orf86Q6ZW13 317 aa18.04■□□□□ 0.48
USHBP1-202ENST00000324554 CERS5Q8N5B7 392 aa18.04■□□□□ 0.48
USHBP1-202ENST00000324554 EYA3Q99504 573 aa18.04■□□□□ 0.48
USHBP1-202ENST00000324554 PLIN2Q99541 437 aa18.04■□□□□ 0.48
USHBP1-202ENST00000324554 NUP88Q99567 741 aaPredicted RBP18.04■□□□□ 0.48
USHBP1-202ENST00000324554 TTF2Q9UNY4 1162 aaKnown RBP18.04■□□□□ 0.48
USHBP1-202ENST00000324554 DDX60LQ5H9U9 1706 aaKnown RBP18.04■□□□□ 0.48
USHBP1-202ENST00000324554 CCDC151A5D8V7 595 aa18.04■□□□□ 0.48
USHBP1-202ENST00000324554 ARHGAP25P42331 645 aa18.04■□□□□ 0.48
USHBP1-202ENST00000324554 BAG6P46379 1132 aa18.04■□□□□ 0.48
USHBP1-202ENST00000324554 CDK8P49336 464 aa18.04■□□□□ 0.48
USHBP1-202ENST00000324554 KIF4BQ2VIQ3 1234 aa18.04■□□□□ 0.48
USHBP1-202ENST00000324554 TAF3Q5VWG9 929 aa18.04■□□□□ 0.48
USHBP1-202ENST00000324554 TMC4Q7Z404 712 aa18.04■□□□□ 0.48
USHBP1-202ENST00000324554 GPR75-ASB3A0A0A6YYF3 556 aa18.03■□□□□ 0.48
USHBP1-202ENST00000324554 CCDC66A2RUB6 948 aa18.03■□□□□ 0.48
USHBP1-202ENST00000324554 PARP1P09874 1014 aaKnown RBP18.03■□□□□ 0.48
USHBP1-202ENST00000324554 NAPAP54920 295 aa18.03■□□□□ 0.48
USHBP1-202ENST00000324554 CERS3Q8IU89 383 aa18.03■□□□□ 0.48
USHBP1-202ENST00000324554 PNKPQ96T60 521 aa18.03■□□□□ 0.48
USHBP1-202ENST00000324554 FLT1P17948 1338 aa18.03■□□□□ 0.48
USHBP1-202ENST00000324554 CTAGE9A4FU28 777 aa18.03■□□□□ 0.48
USHBP1-202ENST00000324554 RHOBTB3O94955 611 aa18.03■□□□□ 0.48
USHBP1-202ENST00000324554 UBXN1Q04323 297 aa18.03■□□□□ 0.48
USHBP1-202ENST00000324554 TEX11Q8IYF3 940 aa18.03■□□□□ 0.48
USHBP1-202ENST00000324554 CEP112Q8N8E3 955 aa18.03■□□□□ 0.48
USHBP1-202ENST00000324554 NEDD1Q8NHV4 660 aa18.03■□□□□ 0.48
USHBP1-202ENST00000324554 COA1Q9GZY4 146 aa18.03■□□□□ 0.48
USHBP1-202ENST00000324554 SLX4Q8IY92 1834 aa18.02■□□□□ 0.48
USHBP1-202ENST00000324554 LTBP1Q14766 1721 aa18.02■□□□□ 0.48
USHBP1-202ENST00000324554 JAKMIP3Q5VZ66 844 aa18.02■□□□□ 0.48
USHBP1-202ENST00000324554 CYP26C1Q6V0L0 522 aa18.02■□□□□ 0.48
USHBP1-202ENST00000324554 GIMAP8Q8ND71 665 aaPredicted RBP18.02■□□□□ 0.48
USHBP1-202ENST00000324554 SLF1Q9BQI6 1058 aa18.02■□□□□ 0.48
USHBP1-202ENST00000324554 LRRC37AA6NMS7 1700 aa18.02■□□□□ 0.48
USHBP1-202ENST00000324554 KRT9P35527 623 aa18.02■□□□□ 0.47
USHBP1-202ENST00000324554 BRD3Q15059 726 aa18.02■□□□□ 0.47
USHBP1-202ENST00000324554 USP17L2Q6R6M4 530 aa18.02■□□□□ 0.47
USHBP1-202ENST00000324554 KRT25Q7Z3Z0 450 aa18.02■□□□□ 0.47
USHBP1-202ENST00000324554 CHP1Q99653 195 aa18.02■□□□□ 0.47
USHBP1-202ENST00000324554 CCNT1O60563 726 aaKnown RBP18.01■□□□□ 0.47
USHBP1-202ENST00000324554 OR52Z1P0C646 297 aa18.01■□□□□ 0.47
USHBP1-202ENST00000324554 LETM2Q2VYF4 491 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms