RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 ZNF507Q8TCN5 953 aa17.77■□□□□ 0.44
SMARCD2-202ENST00000323347 MTMR9Q96QG7 549 aa17.77■□□□□ 0.44
SMARCD2-202ENST00000323347 CPVLQ9H3G5 476 aa17.77■□□□□ 0.44
SMARCD2-202ENST00000323347 MRPL44Q9H9J2 332 aaKnown RBP17.77■□□□□ 0.44
SMARCD2-202ENST00000323347 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.77■□□□□ 0.44
SMARCD2-202ENST00000323347 V9GYY5 206 aaPredicted RBP17.77■□□□□ 0.44
SMARCD2-202ENST00000323347 CCNT1O60563 726 aaKnown RBP17.76■□□□□ 0.43
SMARCD2-202ENST00000323347 HOXA7P31268 230 aaPredicted RBP17.76■□□□□ 0.43
SMARCD2-202ENST00000323347 TXNRD1Q16881 649 aa17.76■□□□□ 0.43
SMARCD2-202ENST00000323347 TTI2Q6NXR4 508 aa17.76■□□□□ 0.43
SMARCD2-202ENST00000323347 REXO1Q8N1G1 1221 aaKnown RBP17.76■□□□□ 0.43
SMARCD2-202ENST00000323347 TRIM9Q9C026 710 aa17.76■□□□□ 0.43
SMARCD2-202ENST00000323347 MRFAP1Q9Y605 127 aa17.76■□□□□ 0.43
SMARCD2-202ENST00000323347 EP400Q96L91 3159 aa17.76■□□□□ 0.43
SMARCD2-202ENST00000323347 PSMA7O14818 248 aa17.76■□□□□ 0.43
SMARCD2-202ENST00000323347 PLCG1P19174 1290 aa17.76■□□□□ 0.43
SMARCD2-202ENST00000323347 CCT6AP40227 531 aaKnown RBP17.76■□□□□ 0.43
SMARCD2-202ENST00000323347 FXR2P51116 673 aaKnown RBP eCLIP17.76■□□□□ 0.43
SMARCD2-202ENST00000323347 CBX1P83916 185 aa17.76■□□□□ 0.43
SMARCD2-202ENST00000323347 LETM2Q2VYF4 491 aa17.76■□□□□ 0.43
SMARCD2-202ENST00000323347 HHIPL2Q6UWX4 724 aa17.76■□□□□ 0.43
SMARCD2-202ENST00000323347 TBCKQ8TEA7 893 aa17.76■□□□□ 0.43
SMARCD2-202ENST00000323347 MMTAG2Q9BU76 263 aaKnown RBP17.76■□□□□ 0.43
SMARCD2-202ENST00000323347 VPS16Q9H269 839 aa17.76■□□□□ 0.43
SMARCD2-202ENST00000323347 ABHD10Q9NUJ1 306 aa17.76■□□□□ 0.43
SMARCD2-202ENST00000323347 TAB2Q9NYJ8 693 aa17.76■□□□□ 0.43
SMARCD2-202ENST00000323347 LGALS16A8MUM7 142 aa17.75■□□□□ 0.43
SMARCD2-202ENST00000323347 CERS5Q8N5B7 392 aa17.75■□□□□ 0.43
SMARCD2-202ENST00000323347 ARID3AQ99856 593 aa17.75■□□□□ 0.43
SMARCD2-202ENST00000323347 DESI2Q9BSY9 194 aa17.75■□□□□ 0.43
SMARCD2-202ENST00000323347 TTF2Q9UNY4 1162 aaKnown RBP17.75■□□□□ 0.43
SMARCD2-202ENST00000323347 MTMR7Q9Y216 660 aa17.75■□□□□ 0.43
SMARCD2-202ENST00000323347 ANKRD31Q8N7Z5 1873 aa17.75■□□□□ 0.43
SMARCD2-202ENST00000323347 EDIL3O43854 480 aa17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 SRGNP10124 158 aa17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 PMS1P54277 932 aaKnown RBP17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 AMPD3Q01432 767 aa17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 TUBB2AQ13885 445 aa17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 MB21D1Q8N884 522 aa17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 CPLX3Q8WVH0 158 aa17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 UBXN4Q92575 508 aa17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 CCDC47Q96A33 483 aaKnown RBP17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 TUBB2BQ9BVA1 445 aa17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 DDX4Q9NQI0 724 aaKnown RBP17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 GREB1LQ9C091 1923 aaPredicted RBP17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 COBLO75128 1261 aa17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 AKR1B1P15121 316 aa17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 NPR1P16066 1061 aa17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 CCNE1P24864 410 aa17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 ZNF543Q08ER8 600 aa17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 PDIA5Q14554 519 aa17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 CNNM4Q6P4Q7 775 aa17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 CYP26C1Q6V0L0 522 aa17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 PROM2Q8N271 834 aa17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 MNS1Q8NEH6 495 aa17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 RASSF8Q8NHQ8 419 aa17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 MTMR8Q96EF0 704 aa17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 DUSP9Q99956 384 aaKnown RBP17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 MRIQ9BWK5 157 aa17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 CARD6Q9BX69 1037 aa17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 UBA5Q9GZZ9 404 aa17.74■□□□□ 0.43
SMARCD2-202ENST00000323347 BRWD3Q6RI45 1802 aa17.73■□□□□ 0.43
SMARCD2-202ENST00000323347 PNMA6FA0A0J9YX94 578 aa17.73■□□□□ 0.43
SMARCD2-202ENST00000323347 BICDL2A1A5D9 508 aa17.73■□□□□ 0.43
SMARCD2-202ENST00000323347 SPDYE4A6NLX3 237 aa17.73■□□□□ 0.43
SMARCD2-202ENST00000323347 RNF225M0QZC1 329 aaPredicted RBP17.73■□□□□ 0.43
SMARCD2-202ENST00000323347 TTLL1O95922 423 aa17.73■□□□□ 0.43
SMARCD2-202ENST00000323347 ERVK-24P63145 666 aa17.73■□□□□ 0.43
SMARCD2-202ENST00000323347 RSRC2Q7L4I2 434 aaKnown RBP17.73■□□□□ 0.43
SMARCD2-202ENST00000323347 ZC3H12CQ9C0D7 883 aaKnown RBP17.73■□□□□ 0.43
SMARCD2-202ENST00000323347 EHD4Q9H223 541 aa17.73■□□□□ 0.43
SMARCD2-202ENST00000323347 VAT1LQ9HCJ6 419 aa17.73■□□□□ 0.43
SMARCD2-202ENST00000323347 BIN2Q9UBW5 565 aaPredicted RBP17.73■□□□□ 0.43
SMARCD2-202ENST00000323347 STK17AQ9UEE5 414 aa17.73■□□□□ 0.43
SMARCD2-202ENST00000323347 SERPINB13Q9UIV8 391 aa17.73■□□□□ 0.43
SMARCD2-202ENST00000323347 TRIM49BA6NDI0 452 aa17.72■□□□□ 0.43
SMARCD2-202ENST00000323347 SHMT1P34896 483 aa17.72■□□□□ 0.43
SMARCD2-202ENST00000323347 CLK2P49760 499 aaKnown RBP17.72■□□□□ 0.43
SMARCD2-202ENST00000323347 ADCY7P51828 1080 aa17.72■□□□□ 0.43
SMARCD2-202ENST00000323347 UBXN1Q04323 297 aa17.72■□□□□ 0.43
SMARCD2-202ENST00000323347 ARHGAP29Q52LW3 1261 aa17.72■□□□□ 0.43
SMARCD2-202ENST00000323347 NLGN1Q8N2Q7 840 aa17.72■□□□□ 0.43
SMARCD2-202ENST00000323347 RIC8AQ9NPQ8 531 aa17.72■□□□□ 0.43
SMARCD2-202ENST00000323347 MYO1AQ9UBC5 1043 aa17.72■□□□□ 0.43
SMARCD2-202ENST00000323347 MAPK8IP1Q9UQF2 711 aa17.72■□□□□ 0.43
SMARCD2-202ENST00000323347 ZSCAN20P17040 1043 aaPredicted RBP17.72■□□□□ 0.43
SMARCD2-202ENST00000323347 ALDH1B1P30837 517 aa17.72■□□□□ 0.43
SMARCD2-202ENST00000323347 DNM2P50570 870 aa17.72■□□□□ 0.43
SMARCD2-202ENST00000323347 JAKMIP3Q5VZ66 844 aa17.72■□□□□ 0.43
SMARCD2-202ENST00000323347 PPP4R3AQ6IN85 833 aa17.72■□□□□ 0.43
SMARCD2-202ENST00000323347 DPP8Q6V1X1 898 aaPredicted RBP17.72■□□□□ 0.43
SMARCD2-202ENST00000323347 P2RX5Q93086 422 aa17.72■□□□□ 0.43
SMARCD2-202ENST00000323347 CALML4Q96GE6 196 aa17.72■□□□□ 0.43
SMARCD2-202ENST00000323347 DNAJC7Q99615 494 aa17.72■□□□□ 0.43
SMARCD2-202ENST00000323347 JMJD4Q9H9V9 463 aa17.72■□□□□ 0.43
SMARCD2-202ENST00000323347 USP40Q9NVE5 1235 aa17.72■□□□□ 0.43
SMARCD2-202ENST00000323347 ZNF446Q9NWS9 450 aa17.72■□□□□ 0.43
SMARCD2-202ENST00000323347 CAPN11Q9UMQ6 739 aa17.72■□□□□ 0.43
SMARCD2-202ENST00000323347 PVALEFA0A1B0GWK0 134 aa17.71■□□□□ 0.43
SMARCD2-202ENST00000323347 KIF5CO60282 957 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms