RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 PBKQ96KB5 322 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 CDC5LQ99459 802 aaKnown RBP7.72□□□□□ -1.17
SMC1A-201ENST00000322213 CRNKL1Q9BZJ0 848 aaKnown RBP7.72□□□□□ -1.17
SMC1A-201ENST00000322213 FGFR1OP2Q9NVK5 253 aa7.72□□□□□ -1.17
SMC1A-201ENST00000322213 ZNF638Q14966 1978 aaKnown RBP7.71□□□□□ -1.17
SMC1A-201ENST00000322213 PNMA6EA0A0J9YXQ4 647 aa7.71□□□□□ -1.17
SMC1A-201ENST00000322213 ENO4A6NNW6 628 aa7.71□□□□□ -1.17
SMC1A-201ENST00000322213 TMEM232C9JQI7 657 aa7.71□□□□□ -1.17
SMC1A-201ENST00000322213 NAPAP54920 295 aa7.71□□□□□ -1.17
SMC1A-201ENST00000322213 PDCLQ13371 301 aa7.71□□□□□ -1.17
SMC1A-201ENST00000322213 SLF2Q8IX21 1173 aa7.71□□□□□ -1.17
SMC1A-201ENST00000322213 LRRC37BQ96QE4 947 aa7.71□□□□□ -1.17
SMC1A-201ENST00000322213 FAM207AQ9NSI2 230 aaPredicted RBP7.71□□□□□ -1.17
SMC1A-201ENST00000322213 TP53BP1Q12888 1972 aaPredicted RBP7.71□□□□□ -1.17
SMC1A-201ENST00000322213 SEMA3EO15041 775 aa7.71□□□□□ -1.17
SMC1A-201ENST00000322213 CAND2O75155 1236 aa7.71□□□□□ -1.17
SMC1A-201ENST00000322213 UQCRFS1P1P0C7P4 283 aa7.71□□□□□ -1.17
SMC1A-201ENST00000322213 MAGEA1P43355 309 aa7.71□□□□□ -1.17
SMC1A-201ENST00000322213 HS2ST1Q7LGA3 356 aa7.71□□□□□ -1.17
SMC1A-201ENST00000322213 PHACTR3Q96KR7 559 aa7.71□□□□□ -1.17
SMC1A-201ENST00000322213 ATP6V1G3Q96LB4 118 aa7.71□□□□□ -1.17
SMC1A-201ENST00000322213 KIF9Q9HAQ2 790 aa7.71□□□□□ -1.17
SMC1A-201ENST00000322213 XAB2Q9HCS7 855 aaKnown RBP7.71□□□□□ -1.17
SMC1A-201ENST00000322213 HPCAL4Q9UM19 191 aa7.71□□□□□ -1.17
SMC1A-201ENST00000322213 FHOD1Q9Y613 1164 aa7.71□□□□□ -1.17
SMC1A-201ENST00000322213 KLC1Q07866 573 aa7.71□□□□□ -1.18
SMC1A-201ENST00000322213 ZKSCAN3Q9BRR0 538 aa7.71□□□□□ -1.18
SMC1A-201ENST00000322213 MAPK8IP1Q9UQF2 711 aa7.71□□□□□ -1.18
SMC1A-201ENST00000322213 POLD1P28340 1107 aa7.71□□□□□ -1.18
SMC1A-201ENST00000322213 PLCB3Q01970 1234 aa7.71□□□□□ -1.18
SMC1A-201ENST00000322213 PPARDQ03181 441 aa7.71□□□□□ -1.18
SMC1A-201ENST00000322213 TTC38Q5R3I4 469 aa7.71□□□□□ -1.18
SMC1A-201ENST00000322213 C3orf20Q8ND61 904 aa7.71□□□□□ -1.18
SMC1A-201ENST00000322213 ABHD10Q9NUJ1 306 aa7.71□□□□□ -1.18
SMC1A-201ENST00000322213 STK24Q9Y6E0 443 aa7.71□□□□□ -1.18
SMC1A-201ENST00000322213 MFAP3LO75121 409 aa7.71□□□□□ -1.18
SMC1A-201ENST00000322213 PDE4DQ08499 809 aa7.71□□□□□ -1.18
SMC1A-201ENST00000322213 GSDMAQ96QA5 445 aa7.71□□□□□ -1.18
SMC1A-201ENST00000322213 KDRP35968 1356 aa7.71□□□□□ -1.18
SMC1A-201ENST00000322213 GOLGA8QA0A0J9YX86 632 aa7.71□□□□□ -1.18
SMC1A-201ENST00000322213 GOLGA8OA6NCC3 632 aa7.71□□□□□ -1.18
SMC1A-201ENST00000322213 E7EWF7 191 aa7.71□□□□□ -1.18
SMC1A-201ENST00000322213 GOLGA8NF8WBI6 632 aa7.71□□□□□ -1.18
SMC1A-201ENST00000322213 TSPY3P0CV98 308 aa7.71□□□□□ -1.18
SMC1A-201ENST00000322213 TSPY8P0CW00 308 aa7.71□□□□□ -1.18
SMC1A-201ENST00000322213 H2AFXP16104 143 aaPredicted RBP7.71□□□□□ -1.18
SMC1A-201ENST00000322213 COPB1P53618 953 aaKnown RBP7.71□□□□□ -1.18
SMC1A-201ENST00000322213 ACTN3Q08043 901 aaPredicted RBP7.71□□□□□ -1.18
SMC1A-201ENST00000322213 DIXDC1Q155Q3 683 aa7.71□□□□□ -1.18
SMC1A-201ENST00000322213 TMTC3Q6ZXV5 915 aa7.71□□□□□ -1.18
SMC1A-201ENST00000322213 MSANTD4Q8NCY6 345 aa7.71□□□□□ -1.18
SMC1A-201ENST00000322213 SETD1AO15047 1707 aaKnown RBP7.71□□□□□ -1.18
SMC1A-201ENST00000322213 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.7□□□□□ -1.18
SMC1A-201ENST00000322213 CCND1P24385 295 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 PPP2R2AP63151 447 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 ANKLE2Q86XL3 938 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 MAP7D3Q8IWC1 876 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 ACRBPQ8NEB7 543 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 ZBTB10Q96DT7 871 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 ZMYND12Q9H0C1 365 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 ATP6V0A4Q9HBG4 840 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 NFU1Q9UMS0 254 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 MYL1P05976 194 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 MRPS35P82673 323 aaKnown RBP7.7□□□□□ -1.18
SMC1A-201ENST00000322213 SFSWAPQ12872 951 aaKnown RBP7.7□□□□□ -1.18
SMC1A-201ENST00000322213 ANKRD2Q9GZV1 360 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 AGTPBP1Q9UPW5 1226 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 ABCC12Q96J65 1359 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 ZFC3H1O60293 1989 aaKnown RBP7.7□□□□□ -1.18
SMC1A-201ENST00000322213 HNRNPH1P31943 449 aaKnown RBP7.7□□□□□ -1.18
SMC1A-201ENST00000322213 ANKRD42Q8N9B4 389 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 CFAP61Q8NHU2 1237 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 PHKBQ93100 1093 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 MIEF2Q96C03 454 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 NHEJ1Q9H9Q4 299 aaPredicted RBP7.7□□□□□ -1.18
SMC1A-201ENST00000322213 RGL1Q9NZL6 768 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 SPTBP11277 2137 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 CPSF1Q10570 1443 aaKnown RBP7.7□□□□□ -1.18
SMC1A-201ENST00000322213 CYP2E1P05181 493 aaPredicted RBP7.7□□□□□ -1.18
SMC1A-201ENST00000322213 LMNB2Q03252 620 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 ANKRD20A4Q4UJ75 823 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 ANKRD20A8PQ5CZ79 823 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 ANKRD20A2Q5SQ80 823 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 ANKRD20A1Q5TYW2 823 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 ANKRD13DQ6ZTN6 518 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.7□□□□□ -1.18
SMC1A-201ENST00000322213 YTHDC2Q9H6S0 1430 aaKnown RBP7.7□□□□□ -1.18
SMC1A-201ENST00000322213 PXDNLA1KZ92 1463 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 SLC7A5Q01650 507 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 ATP8A1Q9Y2Q0 1164 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 RPN1P04843 607 aaKnown RBP7.7□□□□□ -1.18
SMC1A-201ENST00000322213 TFCP2Q12800 502 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 KRT79Q5XKE5 535 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 ZNF652Q9Y2D9 606 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 FER1L4A9Z1Z3 1794 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 LSP1P33241 339 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 AP2B1P63010 937 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 SLC4A8Q2Y0W8 1093 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 SLC9C2Q5TAH2 1124 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 HOOK2Q96ED9 719 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms