RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 KAZNQ674X7 775 aa18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 ZNF148Q9UQR1 794 aa18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 POC1B-GALNT4F8VUJ3 575 aa18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 KPNA2P52292 529 aaKnown RBP18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 IFNAR2P48551 515 aa18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 SPATA1Q5VX52 437 aa18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 ADAT2Q7Z6V5 191 aaKnown RBP18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 ANLNQ9NQW6 1124 aa18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 CCDC151A5D8V7 595 aa18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 ATP6V1E1P36543 226 aa18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 EIF6P56537 245 aaKnown RBP18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 IDI1Q13907 227 aa18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 GPIHBP1Q8IV16 184 aa18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 NME8Q8N427 588 aa18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 KLHL29Q96CT2 875 aa18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 SOS2Q07890 1332 aaPredicted RBP18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 JAK2O60674 1132 aa18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 EIF3BP55884 814 aaKnown RBP18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 E2F5Q15329 346 aa18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 MTHFSDQ2M296 383 aaKnown RBP18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 GRAMD4Q6IC98 578 aa18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 IL2RBP14784 551 aa18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 PDE1BQ01064 536 aa18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 KDRP35968 1356 aa18.36■□□□□ 0.53
SMCHD1-201ENST00000320876 MED23Q9ULK4 1368 aa18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 PIK3CAP42336 1068 aa18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 ART3Q13508 389 aa18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 RETREG2Q8NC44 543 aa18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 SERTAD1Q9UHV2 236 aa18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 GINS2Q9Y248 185 aa18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 UNC13AQ9UPW8 1703 aa18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 CMA1P23946 247 aa18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 RASSF7Q02833 373 aa18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 ITKQ08881 620 aa18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 TNNC2P02585 160 aa18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 SNX1Q13596 522 aa18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 MED10Q9BTT4 135 aa18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 GTPBP6O43824 516 aaPredicted RBP18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 CTDSPL2Q05D32 466 aa18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 FAM173BQ6P4H8 233 aa18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 PLBD2Q8NHP8 589 aa18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 SPDYE16A6NNV3 312 aaPredicted RBP18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 PGRMC1O00264 195 aaKnown RBP18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 SPDYE2Q495Y8 402 aa18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 BLMP54132 1417 aaPredicted RBP18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 GUCY2CP25092 1073 aa18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 PCYT1AP49585 367 aa18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 NBPF9Q3BBW0 867 aa18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 RNF14Q9UBS8 474 aa18.35■□□□□ 0.53
SMCHD1-201ENST00000320876 ADCY9O60503 1353 aa18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 DCTN3O75935 186 aa18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 MAP7D3Q8IWC1 876 aa18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 K7ENM7 598 aa18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 CUL1Q13616 776 aa18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 FAM133BQ5BKY9 247 aaKnown RBP18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 TRAIPQ9BWF2 469 aa18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 FANCLQ9NW38 375 aa18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 MSH2P43246 934 aa18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 MAP3K7CLP57077 242 aa18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 SRRM1Q8IYB3 904 aaKnown RBP18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 TSPYL6Q8N831 410 aa18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 PARP3Q9Y6F1 533 aa18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 CPP00450 1065 aa18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 SPATA5Q8NB90 893 aa18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 MCF2P10911 925 aa18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 FAM102BQ5T8I3 360 aa18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 PPP1R2P3Q6NXS1 205 aa18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 SCYL2Q6P3W7 929 aa18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 DENND4BO75064 1496 aaPredicted RBP18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 POLR2FP61218 127 aaKnown RBP18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 TEKT2Q9UIF3 430 aa18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 MAPK13O15264 365 aa18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 LIG4P49917 911 aa18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 BPIFB4P59827 614 aa18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 ZC3H18Q86VM9 953 aaKnown RBP18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 DEPTORQ8TB45 409 aa18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 ARPP21Q9UBL0 812 aaPredicted RBP18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 CCPG1Q9ULG6 757 aa18.34■□□□□ 0.53
SMCHD1-201ENST00000320876 UHRF1BP1Q6BDS2 1440 aa18.33■□□□□ 0.53
SMCHD1-201ENST00000320876 HNRNPCL2B2RXH8 293 aa18.33■□□□□ 0.53
SMCHD1-201ENST00000320876 HNRNPCL1O60812 293 aaKnown RBP18.33■□□□□ 0.53
SMCHD1-201ENST00000320876 KCNA4P22459 653 aa18.33■□□□□ 0.53
SMCHD1-201ENST00000320876 DCLK2Q8N568 766 aa18.33■□□□□ 0.53
SMCHD1-201ENST00000320876 MYL10Q9BUA6 226 aa18.33■□□□□ 0.53
SMCHD1-201ENST00000320876 MYH10P35580 1976 aa18.33■□□□□ 0.53
SMCHD1-201ENST00000320876 MCF2LO15068 1137 aa18.33■□□□□ 0.53
SMCHD1-201ENST00000320876 CREB3O43889 395 aa18.33■□□□□ 0.53
SMCHD1-201ENST00000320876 DDX25Q9UHL0 483 aaKnown RBP18.33■□□□□ 0.53
SMCHD1-201ENST00000320876 ATP8A1Q9Y2Q0 1164 aa18.33■□□□□ 0.53
SMCHD1-201ENST00000320876 DAAM1Q9Y4D1 1078 aa18.33■□□□□ 0.53
SMCHD1-201ENST00000320876 ABCA5Q8WWZ7 1642 aa18.33■□□□□ 0.53
SMCHD1-201ENST00000320876 NR1D1P20393 614 aa18.33■□□□□ 0.53
SMCHD1-201ENST00000320876 UPF3AQ9H1J1 476 aaKnown RBP18.33■□□□□ 0.53
SMCHD1-201ENST00000320876 TPCN1Q9ULQ1 816 aa18.33■□□□□ 0.53
SMCHD1-201ENST00000320876 GPT2Q8TD30 523 aa18.33■□□□□ 0.52
SMCHD1-201ENST00000320876 FMO2Q99518 471 aa18.33■□□□□ 0.52
SMCHD1-201ENST00000320876 EXOC3L4Q17RC7 722 aa18.33■□□□□ 0.52
SMCHD1-201ENST00000320876 FAM178BQ8IXR5 827 aa18.33■□□□□ 0.52
SMCHD1-201ENST00000320876 EPB41L5Q9HCM4 733 aa18.33■□□□□ 0.52
SMCHD1-201ENST00000320876 MYO5CQ9NQX4 1742 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms