RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 SNAP25P60880 206 aa23.69■■□□□ 1.38
SERF1A-201ENST00000317633 IRX5P78411 483 aaPredicted RBP23.69■■□□□ 1.38
SERF1A-201ENST00000317633 RRP12Q5JTH9 1297 aaKnown RBP23.69■■□□□ 1.38
SERF1A-201ENST00000317633 MFSD5Q6N075 450 aa23.69■■□□□ 1.38
SERF1A-201ENST00000317633 NSMFQ6X4W1 530 aa23.69■■□□□ 1.38
SERF1A-201ENST00000317633 CDX2Q99626 313 aaPredicted RBP23.69■■□□□ 1.38
SERF1A-201ENST00000317633 AP5M1Q9H0R1 490 aa23.69■■□□□ 1.38
SERF1A-201ENST00000317633 TCP11L1Q9NUJ3 509 aa23.69■■□□□ 1.38
SERF1A-201ENST00000317633 CYP39A1Q9NYL5 469 aa23.69■■□□□ 1.38
SERF1A-201ENST00000317633 LAMA2P24043 3122 aaKnown RBP23.68■■□□□ 1.38
SERF1A-201ENST00000317633 TMEM265A0A087WTH1 108 aa23.68■■□□□ 1.38
SERF1A-201ENST00000317633 A0A0D9SFI3 127 aa23.68■■□□□ 1.38
SERF1A-201ENST00000317633 CABYRO75952 493 aa23.68■■□□□ 1.38
SERF1A-201ENST00000317633 HSPD1P10809 573 aaKnown RBP23.68■■□□□ 1.38
SERF1A-201ENST00000317633 MUM1L1Q5H9M0 696 aa23.68■■□□□ 1.38
SERF1A-201ENST00000317633 BTNL9Q6UXG8 535 aa23.68■■□□□ 1.38
SERF1A-201ENST00000317633 TMEM47Q9BQJ4 181 aa23.68■■□□□ 1.38
SERF1A-201ENST00000317633 RANBP17Q9H2T7 1088 aaKnown RBP23.68■■□□□ 1.38
SERF1A-201ENST00000317633 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.67■■□□□ 1.38
SERF1A-201ENST00000317633 ZEB2O60315 1214 aa23.67■■□□□ 1.38
SERF1A-201ENST00000317633 PCP11498 1178 aaKnown RBP23.67■■□□□ 1.38
SERF1A-201ENST00000317633 MFAP1P55081 439 aaKnown RBP23.67■■□□□ 1.38
SERF1A-201ENST00000317633 IQSEC1Q6DN90 963 aa23.67■■□□□ 1.38
SERF1A-201ENST00000317633 TLK2Q86UE8 772 aa23.67■■□□□ 1.38
SERF1A-201ENST00000317633 ADD3Q9UEY8 706 aaKnown RBP23.67■■□□□ 1.38
SERF1A-201ENST00000317633 PNMA2Q9UL42 364 aa23.67■■□□□ 1.38
SERF1A-201ENST00000317633 GNEQ9Y223 722 aaKnown RBP23.67■■□□□ 1.38
SERF1A-201ENST00000317633 LRRC37A2A6NM11 1700 aa23.67■■□□□ 1.38
SERF1A-201ENST00000317633 CCDC171Q6TFL3 1326 aa23.66■■□□□ 1.38
SERF1A-201ENST00000317633 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.66■■□□□ 1.38
SERF1A-201ENST00000317633 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.66■■□□□ 1.38
SERF1A-201ENST00000317633 CTAGE5O15320 804 aa23.66■■□□□ 1.38
SERF1A-201ENST00000317633 BEX3Q00994 111 aa23.66■■□□□ 1.38
SERF1A-201ENST00000317633 NMIQ13287 307 aaPredicted RBP23.66■■□□□ 1.38
SERF1A-201ENST00000317633 PPIGQ13427 754 aaKnown RBP eCLIP23.66■■□□□ 1.38
SERF1A-201ENST00000317633 SYDE2Q5VT97 1194 aa23.66■■□□□ 1.38
SERF1A-201ENST00000317633 MFSD6Q6ZSS7 791 aa23.66■■□□□ 1.38
SERF1A-201ENST00000317633 RASGRP2Q7LDG7 609 aa23.66■■□□□ 1.38
SERF1A-201ENST00000317633 TMEM199Q8N511 208 aa23.66■■□□□ 1.38
SERF1A-201ENST00000317633 RILPL2Q969X0 211 aa23.66■■□□□ 1.38
SERF1A-201ENST00000317633 TTC14Q96N46 770 aa23.66■■□□□ 1.38
SERF1A-201ENST00000317633 SEZ6LQ9BYH1 1024 aa23.66■■□□□ 1.38
SERF1A-201ENST00000317633 LNPKQ9C0E8 428 aa23.66■■□□□ 1.38
SERF1A-201ENST00000317633 VTA1Q9NP79 307 aa23.66■■□□□ 1.38
SERF1A-201ENST00000317633 Q9Y3F1 56 aa23.66■■□□□ 1.38
SERF1A-201ENST00000317633 LOC102724159A0A0B4J2E5 919 aa23.65■■□□□ 1.38
SERF1A-201ENST00000317633 SLC16A2P36021 539 aa23.65■■□□□ 1.38
SERF1A-201ENST00000317633 PWP2Q15269 919 aaKnown RBP23.65■■□□□ 1.38
SERF1A-201ENST00000317633 FSCN1Q16658 493 aaKnown RBP23.65■■□□□ 1.38
SERF1A-201ENST00000317633 TTBK2Q6IQ55 1244 aa23.65■■□□□ 1.38
SERF1A-201ENST00000317633 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.65■■□□□ 1.38
SERF1A-201ENST00000317633 FAM126BQ8IXS8 530 aa23.65■■□□□ 1.38
SERF1A-201ENST00000317633 RWDD1Q9H446 243 aaPredicted RBP23.65■■□□□ 1.38
SERF1A-201ENST00000317633 LCTP09848 1927 aa23.65■■□□□ 1.38
SERF1A-201ENST00000317633 ASTN1O14525 1302 aa23.64■■□□□ 1.38
SERF1A-201ENST00000317633 DYNC1LI2O43237 492 aaPredicted RBP23.64■■□□□ 1.37
SERF1A-201ENST00000317633 SMPD1P17405 629 aa23.64■■□□□ 1.37
SERF1A-201ENST00000317633 AKNAD1Q5T1N1 836 aa23.64■■□□□ 1.37
SERF1A-201ENST00000317633 EEPD1Q7L9B9 569 aa23.64■■□□□ 1.37
SERF1A-201ENST00000317633 ZNF589Q86UQ0 364 aaPredicted RBP23.64■■□□□ 1.37
SERF1A-201ENST00000317633 FBXO16Q8IX29 292 aaPredicted RBP23.64■■□□□ 1.37
SERF1A-201ENST00000317633 TTYH1Q9H313 450 aaPredicted RBP23.64■■□□□ 1.37
SERF1A-201ENST00000317633 RNF41Q9H4P4 317 aaPredicted RBP23.64■■□□□ 1.37
SERF1A-201ENST00000317633 GPCPD1Q9NPB8 672 aa23.64■■□□□ 1.37
SERF1A-201ENST00000317633 FRMPD2Q68DX3 1309 aaPredicted RBP23.63■■□□□ 1.37
SERF1A-201ENST00000317633 HAND2P61296 217 aa23.63■■□□□ 1.37
SERF1A-201ENST00000317633 TAPT1Q6NXT6 567 aa23.63■■□□□ 1.37
SERF1A-201ENST00000317633 CXCL17Q6UXB2 119 aa23.63■■□□□ 1.37
SERF1A-201ENST00000317633 MORC4Q8TE76 937 aa23.63■■□□□ 1.37
SERF1A-201ENST00000317633 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.63■■□□□ 1.37
SERF1A-201ENST00000317633 CD4P01730 458 aa23.62■■□□□ 1.37
SERF1A-201ENST00000317633 NT5C2P49902 561 aa23.62■■□□□ 1.37
SERF1A-201ENST00000317633 BAATQ14032 418 aaPredicted RBP23.62■■□□□ 1.37
SERF1A-201ENST00000317633 PSRC1Q6PGN9 363 aaPredicted RBP23.62■■□□□ 1.37
SERF1A-201ENST00000317633 KIAA1211Q6ZU35 1233 aa23.62■■□□□ 1.37
SERF1A-201ENST00000317633 SMC5Q8IY18 1101 aa23.62■■□□□ 1.37
SERF1A-201ENST00000317633 SLC43A3Q8NBI5 491 aa23.62■■□□□ 1.37
SERF1A-201ENST00000317633 MPHOSPH6Q99547 160 aaKnown RBP23.62■■□□□ 1.37
SERF1A-201ENST00000317633 PPP1R12CQ9BZL4 782 aa23.62■■□□□ 1.37
SERF1A-201ENST00000317633 PDGFCQ9NRA1 345 aa23.62■■□□□ 1.37
SERF1A-201ENST00000317633 PTPDC1A2A3K4 754 aa23.61■■□□□ 1.37
SERF1A-201ENST00000317633 PDHBP11177 359 aa23.61■■□□□ 1.37
SERF1A-201ENST00000317633 ITGA7Q13683 1181 aa23.61■■□□□ 1.37
SERF1A-201ENST00000317633 B4GALNT3Q6L9W6 998 aa23.61■■□□□ 1.37
SERF1A-201ENST00000317633 MAFAQ8NHW3 353 aaPredicted RBP23.61■■□□□ 1.37
SERF1A-201ENST00000317633 MYLIPQ8WY64 445 aa23.61■■□□□ 1.37
SERF1A-201ENST00000317633 ESR2Q92731 530 aa23.61■■□□□ 1.37
SERF1A-201ENST00000317633 NFIBO00712 420 aa23.6■■□□□ 1.37
SERF1A-201ENST00000317633 FOSL2P15408 326 aa23.6■■□□□ 1.37
SERF1A-201ENST00000317633 CSF2RAP15509 400 aa23.6■■□□□ 1.37
SERF1A-201ENST00000317633 SDSP20132 328 aa23.6■■□□□ 1.37
SERF1A-201ENST00000317633 DNAJB2P25686 324 aa23.6■■□□□ 1.37
SERF1A-201ENST00000317633 ALDH5A1P51649 535 aaPredicted RBP23.6■■□□□ 1.37
SERF1A-201ENST00000317633 TMEM240Q5SV17 173 aa23.6■■□□□ 1.37
SERF1A-201ENST00000317633 PURBQ96QR8 312 aaKnown RBP23.6■■□□□ 1.37
SERF1A-201ENST00000317633 DDX49Q9Y6V7 483 aaKnown RBP23.6■■□□□ 1.37
SERF1A-201ENST00000317633 ZNF213O14771 459 aa23.59■■□□□ 1.37
SERF1A-201ENST00000317633 ZNF543Q08ER8 600 aa23.59■■□□□ 1.37
SERF1A-201ENST00000317633 DUSP28Q4G0W2 176 aa23.59■■□□□ 1.37
SERF1A-201ENST00000317633 CCDC178Q5BJE1 867 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms