RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 SNX16P57768 344 aa4.95□□□□□ -1.62
CNOT1-201ENST00000317147 ATP2B3Q16720 1220 aa4.95□□□□□ -1.62
CNOT1-201ENST00000317147 MYSM1Q5VVJ2 828 aa4.95□□□□□ -1.62
CNOT1-201ENST00000317147 KRT39Q6A163 491 aa4.95□□□□□ -1.62
CNOT1-201ENST00000317147 PPP4R3CPQ6ZMV5 832 aa4.95□□□□□ -1.62
CNOT1-201ENST00000317147 RBM43Q6ZSC3 357 aaKnown RBP4.95□□□□□ -1.62
CNOT1-201ENST00000317147 PYCARDQ9ULZ3 195 aa4.95□□□□□ -1.62
CNOT1-201ENST00000317147 PODXLO00592 558 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 SLC39A14Q15043 492 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 ZNF483Q8TF39 744 aaPredicted RBP4.94□□□□□ -1.62
CNOT1-201ENST00000317147 TRIM63Q969Q1 353 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 ADCY9O60503 1353 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 A0A1W2PQC6 194 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 VIMP08670 466 aaKnown RBP4.94□□□□□ -1.62
CNOT1-201ENST00000317147 NOP2P46087 812 aaKnown RBP4.94□□□□□ -1.62
CNOT1-201ENST00000317147 ANKRD20A4Q4UJ75 823 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 ANKRD20A8PQ5CZ79 823 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 ANKRD20A2Q5SQ80 823 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 ANKRD20A1Q5TYW2 823 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 NUGGCQ68CJ6 796 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 SSH3Q8TE77 659 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 CACTINQ8WUQ7 758 aaKnown RBP4.94□□□□□ -1.62
CNOT1-201ENST00000317147 SPDL1Q96EA4 605 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 EPN1Q9Y6I3 576 aaPredicted RBP4.94□□□□□ -1.62
CNOT1-201ENST00000317147 GLI2P10070 1586 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 KDM3AQ9Y4C1 1321 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 PGRMC1O00264 195 aaKnown RBP4.94□□□□□ -1.62
CNOT1-201ENST00000317147 KRT9P35527 623 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 HSPA9P38646 679 aaKnown RBP4.94□□□□□ -1.62
CNOT1-201ENST00000317147 WTAPQ15007 396 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 ZFYVE27Q5T4F4 411 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 SND1Q7KZF4 910 aaKnown RBP eCLIP4.94□□□□□ -1.62
CNOT1-201ENST00000317147 UBE3BQ7Z3V4 1068 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 ANKRD35Q8N283 1001 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 TTC25Q96NG3 672 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 EFHD1Q9BUP0 239 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 RWDD2AQ9UIY3 292 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 PALD1Q9ULE6 856 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 FAF1Q9UNN5 650 aaPredicted RBP4.94□□□□□ -1.62
CNOT1-201ENST00000317147 SH3TC1Q8TE82 1336 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 BTBD11A6QL63 1104 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 O00370 1275 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 FSBPO95073 299 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 GGPS1O95749 300 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 KRT5P13647 590 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 DHX9Q08211 1270 aaKnown RBP4.94□□□□□ -1.62
CNOT1-201ENST00000317147 KRR1Q13601 381 aaKnown RBP4.94□□□□□ -1.62
CNOT1-201ENST00000317147 TMEM67Q5HYA8 995 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 FOXP1Q9H334 677 aaPredicted RBP4.94□□□□□ -1.62
CNOT1-201ENST00000317147 KDM4CQ9H3R0 1056 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 SNX14Q9Y5W7 946 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 IFT172Q9UG01 1749 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 STK36Q9NRP7 1315 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 POTEFA5A3E0 1075 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 LRRIQ3A6PVS8 624 aaPredicted RBP4.94□□□□□ -1.62
CNOT1-201ENST00000317147 GRM8O00222 908 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 GMNNO75496 209 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 POTEIP0CG38 1075 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 KLC1Q07866 573 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 TEDDM1Q5T9Z0 273 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 RASIP1Q5U651 963 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 POTEEQ6S8J3 1075 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 KSR2Q6VAB6 950 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 TMCO5AQ8N6Q1 288 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 ZNF280CQ8ND82 737 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 NT5C3AQ9H0P0 336 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 RIMS1Q86UR5 1692 aaKnown RBP4.94□□□□□ -1.62
CNOT1-201ENST00000317147 ABCB11O95342 1321 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 SYNGAP1Q96PV0 1343 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 DEPDC5O75140 1603 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 STRNO43815 780 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 IFIT1P09914 478 aaKnown RBP4.94□□□□□ -1.62
CNOT1-201ENST00000317147 STX2P32856 288 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 AARSP49588 968 aaKnown RBP eCLIP4.94□□□□□ -1.624e-11■■□□□ 13.1
CNOT1-201ENST00000317147 CDC37Q16543 378 aaPredicted RBP4.94□□□□□ -1.62
CNOT1-201ENST00000317147 AGBL2Q5U5Z8 902 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 LCA5Q86VQ0 697 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 CCDC144CPQ8IYA2 1237 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 AGGF1Q8N302 714 aaeCLIP4.94□□□□□ -1.62
CNOT1-201ENST00000317147 HAUS1Q96CS2 278 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 SLITRK6Q9H5Y7 841 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 RNF216Q9NWF9 866 aaPredicted RBP4.94□□□□□ -1.62
CNOT1-201ENST00000317147 PUF60Q9UHX1 559 aaKnown RBP4.94□□□□□ -1.62
CNOT1-201ENST00000317147 A0A1W2PP64 1363 aa4.94□□□□□ -1.62
CNOT1-201ENST00000317147 PLXNB1O43157 2135 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 CNOT1A5YKK6 2376 aaKnown RBP4.93□□□□□ -1.62
CNOT1-201ENST00000317147 CHL1O00533 1208 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 RNF113AO15541 343 aaKnown RBP4.93□□□□□ -1.62
CNOT1-201ENST00000317147 TBCAO75347 108 aaKnown RBP4.93□□□□□ -1.62
CNOT1-201ENST00000317147 HPDP32754 393 aaPredicted RBP4.93□□□□□ -1.62
CNOT1-201ENST00000317147 ITIH4Q14624 930 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 FAM186BQ8IYM0 893 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 ATP6V1G3Q96LB4 118 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 KIFC3Q9BVG8 833 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 C10orf88Q9H8K7 445 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 CIDEBQ9UHD4 219 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 ZDHHC9Q9Y397 364 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 DICER1Q9UPY3 1922 aaKnown RBP4.93□□□□□ -1.62
CNOT1-201ENST00000317147 CSB-PGBD3P0DP91 1061 aa4.93□□□□□ -1.62
CNOT1-201ENST00000317147 MRPL12P52815 198 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms