RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 PDCL2Q8N4E4 241 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 PRIMPOLQ96LW4 560 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 GBP3Q9H0R5 595 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 SLC39A2Q9NP94 309 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 RNF181Q9P0P0 153 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 EXOC7Q9UPT5 735 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 TACC1O75410 805 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 FAM83BQ5T0W9 1011 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 OTUD6AQ7L8S5 288 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 CUEDC2Q9H467 287 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 MLXIPQ9HAP2 919 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 GUCA1BQ9UMX6 200 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 MED1Q15648 1581 aaPredicted RBP15.22■□□□□ 0.03
DDX54-202ENST00000314045 XRN1Q8IZH2 1706 aaKnown RBP15.22■□□□□ 0.03
DDX54-202ENST00000314045 PLSCR1O15162 318 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 BIRC3Q13489 604 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 TRIM14Q14142 442 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 LONRF3Q496Y0 759 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 SRBD1Q8N5C6 995 aaKnown RBP15.22■□□□□ 0.03
DDX54-202ENST00000314045 WRNIP1Q96S55 665 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 ANO3Q9BYT9 981 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 IMPACTQ9P2X3 320 aa15.22■□□□□ 0.03
DDX54-202ENST00000314045 GUCY1A2P33402 732 aa15.21■□□□□ 0.03
DDX54-202ENST00000314045 LARP4BQ92615 738 aaKnown RBP15.21■□□□□ 0.03
DDX54-202ENST00000314045 SENP2Q9HC62 589 aa15.21■□□□□ 0.03
DDX54-202ENST00000314045 MTMR4Q9NYA4 1195 aa15.21■□□□□ 0.03
DDX54-202ENST00000314045 IREB2P48200 963 aaKnown RBP15.21■□□□□ 0.03
DDX54-202ENST00000314045 STRN3Q13033 797 aa15.21■□□□□ 0.03
DDX54-202ENST00000314045 XKR9Q5GH70 373 aa15.21■□□□□ 0.03
DDX54-202ENST00000314045 ARL6IP4Q66PJ3 421 aaKnown RBP15.21■□□□□ 0.03
DDX54-202ENST00000314045 EEF2KMTQ96G04 330 aa15.21■□□□□ 0.03
DDX54-202ENST00000314045 MAGEF1Q9HAY2 307 aa15.21■□□□□ 0.03
DDX54-202ENST00000314045 SPP2Q13103 211 aa15.21■□□□□ 0.02
DDX54-202ENST00000314045 PANK4Q9NVE7 773 aa15.21■□□□□ 0.02
DDX54-202ENST00000314045 LARSQ9P2J5 1176 aaKnown RBP15.21■□□□□ 0.02
DDX54-202ENST00000314045 ZHX2Q9Y6X8 837 aa15.21■□□□□ 0.02
DDX54-202ENST00000314045 POLRMTO00411 1230 aaKnown RBP15.2■□□□□ 0.02
DDX54-202ENST00000314045 SORBS3O60504 671 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 EIF3JO75822 258 aaKnown RBP15.2■□□□□ 0.02
DDX54-202ENST00000314045 SPATA1Q5VX52 437 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 CCDC84Q86UT8 332 aaPredicted RBP15.2■□□□□ 0.02
DDX54-202ENST00000314045 ZNF577Q9BSK1 485 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 PCDHB13Q9Y5F0 798 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 USP17L15C9J2P7 530 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 USP17L13C9JLJ4 530 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 USP17L11C9JVI0 530 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 USP17L18D6R9N7 530 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 USP17L22D6RA61 530 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 USP17L17D6RBQ6 530 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 USP17L19D6RCP7 530 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 USP17L20D6RJB6 530 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 RASA1P20936 1047 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 USP17L24Q0WX57 530 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 SPECC1LQ69YQ0 1117 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 RSBN1LQ6PCB5 846 aaPredicted RBP15.2■□□□□ 0.02
DDX54-202ENST00000314045 USP17L6PQ6QN14 398 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 ARMC9Q7Z3E5 817 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 CLEC10AQ8IUN9 316 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 LRRC4BQ9NT99 713 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 COL4A3BPQ9Y5P4 624 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 GOLGA6L10A6NI86 522 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 DDR1Q08345 913 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 MORC3Q14149 939 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 RASA3Q14644 834 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 KCTD2Q14681 263 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 RIOK1Q9BRS2 568 aaKnown RBP15.2■□□□□ 0.02
DDX54-202ENST00000314045 TUBB4AP04350 444 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 FAM178BQ8IXR5 827 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 KCNB2Q92953 911 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 CENPHQ9H3R5 247 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 CNOT7Q9UIV1 285 aaKnown RBP15.2■□□□□ 0.02
DDX54-202ENST00000314045 RABGAP1Q9Y3P9 1069 aa15.2■□□□□ 0.02
DDX54-202ENST00000314045 FAM193AP78312 1265 aa15.19■□□□□ 0.02
DDX54-202ENST00000314045 QRICH1Q2TAL8 776 aa15.19■□□□□ 0.02
DDX54-202ENST00000314045 NUP58Q9BVL2 599 aa15.19■□□□□ 0.02
DDX54-202ENST00000314045 WDR11Q9BZH6 1224 aa15.19■□□□□ 0.02
DDX54-202ENST00000314045 BARHL2Q9NY43 387 aa15.19■□□□□ 0.02
DDX54-202ENST00000314045 ENTPD3O75355 529 aa15.19■□□□□ 0.02
DDX54-202ENST00000314045 RDH13Q8NBN7 331 aa15.19■□□□□ 0.02
DDX54-202ENST00000314045 PSMD14O00487 310 aa15.19■□□□□ 0.02
DDX54-202ENST00000314045 CLEC17AQ6ZS10 378 aa15.19■□□□□ 0.02
DDX54-202ENST00000314045 CTNNBL1Q8WYA6 563 aaPredicted RBP15.19■□□□□ 0.02
DDX54-202ENST00000314045 KCNJ18B7U540 433 aa15.18■□□□□ 0.02
DDX54-202ENST00000314045 KCNJ12Q14500 433 aa15.18■□□□□ 0.02
DDX54-202ENST00000314045 SYT10Q6XYQ8 523 aa15.18■□□□□ 0.02
DDX54-202ENST00000314045 C11orf57Q6ZUT1 292 aaPredicted RBP15.18■□□□□ 0.02
DDX54-202ENST00000314045 LRP10Q7Z4F1 713 aa15.18■□□□□ 0.02
DDX54-202ENST00000314045 MICALL2Q8IY33 904 aa15.18■□□□□ 0.02
DDX54-202ENST00000314045 RGPD8O14715 1765 aaPredicted RBP15.18■□□□□ 0.02
DDX54-202ENST00000314045 ADAMTSL3P82987 1691 aa15.18■□□□□ 0.02
DDX54-202ENST00000314045 FSD2A1L4K1 749 aa15.18■□□□□ 0.02
DDX54-202ENST00000314045 ZNF569Q5MCW4 686 aa15.18■□□□□ 0.02
DDX54-202ENST00000314045 C16orf86Q6ZW13 317 aa15.18■□□□□ 0.02
DDX54-202ENST00000314045 SMYD4Q8IYR2 804 aaPredicted RBP15.18■□□□□ 0.02
DDX54-202ENST00000314045 CRACR2AQ9BSW2 395 aa15.18■□□□□ 0.02
DDX54-202ENST00000314045 ADGRF4Q8IZF3 695 aa15.18■□□□□ 0.02
DDX54-202ENST00000314045 NAA15Q9BXJ9 866 aaKnown RBP15.18■□□□□ 0.02
DDX54-202ENST00000314045 SYNCQ9H7C4 482 aa15.18■□□□□ 0.02
DDX54-202ENST00000314045 STK17AQ9UEE5 414 aa15.18■□□□□ 0.02
DDX54-202ENST00000314045 ANAPC4Q9UJX5 808 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms