RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 VPS53Q5VIR6 699 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 KCTD1Q719H9 257 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 SH3RF1Q7Z6J0 888 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 CCDC82Q8N4S0 544 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 KCTD17Q8N5Z5 321 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 PCSK9Q8NBP7 692 aaKnown RBP9.63□□□□□ -0.87
TPM3-203ENST00000312970 KLHDC9Q8NEP7 349 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 CHMP4CQ96CF2 233 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 AGBL1Q96MI9 1066 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 TOX2Q96NM4 488 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 SEMA6BQ9H3T3 888 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 ACAD9Q9H845 621 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 SPC25Q9HBM1 224 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 STARD7Q9NQZ5 370 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 PDLIM7Q9NR12 457 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 HOMER2Q9NSB8 354 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.63□□□□□ -0.87
TPM3-203ENST00000312970 ZNF536O15090 1300 aa9.62□□□□□ -0.87
TPM3-203ENST00000312970 SYNRGQ9UMZ2 1314 aa9.62□□□□□ -0.87
TPM3-203ENST00000312970 REV3LO60673 3130 aa9.62□□□□□ -0.87
TPM3-203ENST00000312970 ASB14A6NK59 587 aa9.62□□□□□ -0.87
TPM3-203ENST00000312970 DCDC2CA8MYV0 355 aa9.62□□□□□ -0.87
TPM3-203ENST00000312970 TRIM6-TRIM34B2RNG4 842 aa9.62□□□□□ -0.87
TPM3-203ENST00000312970 NMT2O60551 498 aa9.62□□□□□ -0.87
TPM3-203ENST00000312970 CLTBP09497 229 aa9.62□□□□□ -0.87
TPM3-203ENST00000312970 RAG1P15918 1043 aa9.62□□□□□ -0.87
TPM3-203ENST00000312970 NOVP48745 357 aa9.62□□□□□ -0.87
TPM3-203ENST00000312970 CNTN2Q02246 1040 aa9.62□□□□□ -0.87
TPM3-203ENST00000312970 CCSAPQ6IQ19 270 aaPredicted RBP9.62□□□□□ -0.87
TPM3-203ENST00000312970 ARMCX2Q7L311 632 aa9.62□□□□□ -0.87
TPM3-203ENST00000312970 ANKRD33Q7Z3H0 272 aa9.62□□□□□ -0.87
TPM3-203ENST00000312970 CCDC144CPQ8IYA2 1237 aa9.62□□□□□ -0.87
TPM3-203ENST00000312970 MAFAQ8NHW3 353 aaPredicted RBP9.62□□□□□ -0.87
TPM3-203ENST00000312970 VTI1AQ96AJ9 217 aa9.62□□□□□ -0.87
TPM3-203ENST00000312970 LENG1Q96BZ8 264 aaPredicted RBP9.62□□□□□ -0.87
TPM3-203ENST00000312970 FAM227BQ96M60 508 aa9.62□□□□□ -0.87
TPM3-203ENST00000312970 FGD4Q96M96 766 aa9.62□□□□□ -0.87
TPM3-203ENST00000312970 TRERF1Q96PN7 1200 aa9.62□□□□□ -0.87
TPM3-203ENST00000312970 RWDD1Q9H446 243 aaPredicted RBP9.62□□□□□ -0.87
TPM3-203ENST00000312970 TOMM22Q9NS69 142 aa9.62□□□□□ -0.87
TPM3-203ENST00000312970 RNF146Q9NTX7 359 aa9.62□□□□□ -0.87
TPM3-203ENST00000312970 TMEM39AQ9NV64 488 aa9.62□□□□□ -0.87
TPM3-203ENST00000312970 PRR12Q9ULL5 1215 aa9.62□□□□□ -0.87
TPM3-203ENST00000312970 XIRP2A4UGR9 3374 aa9.61□□□□□ -0.87
TPM3-203ENST00000312970 ELP1O95163 1332 aa9.61□□□□□ -0.87
TPM3-203ENST00000312970 KIAA0355O15063 1070 aa9.61□□□□□ -0.87
TPM3-203ENST00000312970 PQBP1O60828 265 aaKnown RBP9.61□□□□□ -0.87
TPM3-203ENST00000312970 ASGR1P07306 291 aa9.61□□□□□ -0.87
TPM3-203ENST00000312970 C6orf222P0C671 652 aaPredicted RBP9.61□□□□□ -0.87
TPM3-203ENST00000312970 HSPD1P10809 573 aaKnown RBP9.61□□□□□ -0.87
TPM3-203ENST00000312970 ALAS1P13196 640 aa9.61□□□□□ -0.87
TPM3-203ENST00000312970 CST5P28325 142 aaPredicted RBP9.61□□□□□ -0.87
TPM3-203ENST00000312970 GJA9P57773 515 aa9.61□□□□□ -0.87
TPM3-203ENST00000312970 SNAP25P60880 206 aa9.61□□□□□ -0.87
TPM3-203ENST00000312970 FAAP100Q0VG06 881 aa9.61□□□□□ -0.87
TPM3-203ENST00000312970 RRP12Q5JTH9 1297 aaKnown RBP9.61□□□□□ -0.87
TPM3-203ENST00000312970 GNASQ5JWF2 1037 aa9.61□□□□□ -0.87
TPM3-203ENST00000312970 C9orf50Q5SZB4 431 aa9.61□□□□□ -0.87
TPM3-203ENST00000312970 ZNF697Q5TEC3 545 aa9.61□□□□□ -0.87
TPM3-203ENST00000312970 CCDC174Q6PII3 467 aa9.61□□□□□ -0.87
TPM3-203ENST00000312970 FAM133AQ8N9E0 248 aa9.61□□□□□ -0.87
TPM3-203ENST00000312970 DCAF4Q8WV16 495 aa9.61□□□□□ -0.87
TPM3-203ENST00000312970 MYLIPQ8WY64 445 aa9.61□□□□□ -0.87
TPM3-203ENST00000312970 RILPL2Q969X0 211 aa9.61□□□□□ -0.87
TPM3-203ENST00000312970 GLT1D1Q96MS3 346 aa9.61□□□□□ -0.87
TPM3-203ENST00000312970 TTC14Q96N46 770 aa9.61□□□□□ -0.87
TPM3-203ENST00000312970 LNPKQ9C0E8 428 aa9.61□□□□□ -0.87
TPM3-203ENST00000312970 A1CFQ9NQ94 594 aaKnown RBP9.61□□□□□ -0.87
TPM3-203ENST00000312970 TCP11L1Q9NUJ3 509 aa9.61□□□□□ -0.87
TPM3-203ENST00000312970 MTMR7Q9Y216 660 aa9.61□□□□□ -0.87
TPM3-203ENST00000312970 MYO9BQ13459 2157 aa9.6□□□□□ -0.87
TPM3-203ENST00000312970 CHD9Q3L8U1 2897 aa9.6□□□□□ -0.87
TPM3-203ENST00000312970 A0A0D9SFI3 127 aa9.6□□□□□ -0.87
TPM3-203ENST00000312970 SOWAHBA6NEL2 793 aa9.6□□□□□ -0.87
TPM3-203ENST00000312970 TRIM66O15016 1216 aa9.6□□□□□ -0.87
TPM3-203ENST00000312970 ADCY6O43306 1168 aa9.6□□□□□ -0.87
TPM3-203ENST00000312970 TOP1P11387 765 aaKnown RBP9.6□□□□□ -0.87
TPM3-203ENST00000312970 PCP11498 1178 aaKnown RBP9.6□□□□□ -0.87
TPM3-203ENST00000312970 ITGB8P26012 769 aa9.6□□□□□ -0.87
TPM3-203ENST00000312970 CDK7P50613 346 aa9.6□□□□□ -0.87
TPM3-203ENST00000312970 MFAP1P55081 439 aaKnown RBP9.6□□□□□ -0.87
TPM3-203ENST00000312970 NKX3-2P78367 333 aa9.6□□□□□ -0.87
TPM3-203ENST00000312970 TNFAIP2Q03169 654 aa9.6□□□□□ -0.87
TPM3-203ENST00000312970 NMIQ13287 307 aaPredicted RBP9.6□□□□□ -0.87
TPM3-203ENST00000312970 B4GALNT3Q6L9W6 998 aa9.6□□□□□ -0.87
TPM3-203ENST00000312970 BTNL9Q6UXG8 535 aa9.6□□□□□ -0.87
TPM3-203ENST00000312970 MFSD6Q6ZSS7 791 aa9.6□□□□□ -0.87
TPM3-203ENST00000312970 NOL8Q76FK4 1167 aaKnown RBP9.6□□□□□ -0.87
TPM3-203ENST00000312970 SMC5Q8IY18 1101 aa9.6□□□□□ -0.87
TPM3-203ENST00000312970 TMEM47Q9BQJ4 181 aa9.6□□□□□ -0.87
TPM3-203ENST00000312970 KATNBL1Q9H079 304 aa9.6□□□□□ -0.87
TPM3-203ENST00000312970 UPF3AQ9H1J1 476 aaKnown RBP9.6□□□□□ -0.87
TPM3-203ENST00000312970 TTYH1Q9H313 450 aaPredicted RBP9.6□□□□□ -0.87
TPM3-203ENST00000312970 CCPG1Q9ULG6 757 aa9.6□□□□□ -0.87
TPM3-203ENST00000312970 MROH7Q68CQ1 1323 aa9.59□□□□□ -0.87
TPM3-203ENST00000312970 A0A0U1RQG5 324 aaPredicted RBP9.59□□□□□ -0.87
TPM3-203ENST00000312970 MYADML2A6NDP7 307 aa9.59□□□□□ -0.87
TPM3-203ENST00000312970 ARVCFO00192 962 aa9.59□□□□□ -0.87
TPM3-203ENST00000312970 TIMP1P01033 207 aa9.59□□□□□ -0.87
TPM3-203ENST00000312970 ICAM1P05362 532 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms