RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 RBM12Q9NTZ6 932 aaKnown RBP16.34■□□□□ 0.21
COL6A2-202ENST00000310645 FAM153BP0C7A2 387 aa16.33■□□□□ 0.21
COL6A2-202ENST00000310645 HPDP32754 393 aaPredicted RBP16.33■□□□□ 0.21
COL6A2-202ENST00000310645 FUT2Q10981 343 aa16.33■□□□□ 0.21
COL6A2-202ENST00000310645 KCTD19Q17RG1 926 aaPredicted RBP16.33■□□□□ 0.21
COL6A2-202ENST00000310645 FAM153CQ494X1 144 aa16.33■□□□□ 0.21
COL6A2-202ENST00000310645 NLRP10Q86W26 655 aa16.33■□□□□ 0.21
COL6A2-202ENST00000310645 PROSER2Q86WR7 435 aaPredicted RBP16.33■□□□□ 0.21
COL6A2-202ENST00000310645 MMRN2Q9H8L6 949 aa16.33■□□□□ 0.21
COL6A2-202ENST00000310645 FAM153AQ9UHL3 310 aa16.33■□□□□ 0.21
COL6A2-202ENST00000310645 PCDHA13Q9Y5I0 950 aa16.33■□□□□ 0.21
COL6A2-202ENST00000310645 TJP1Q07157 1748 aa16.33■□□□□ 0.21
COL6A2-202ENST00000310645 ATP6V1AP38606 617 aa16.33■□□□□ 0.2
COL6A2-202ENST00000310645 CARSP49589 748 aaKnown RBP16.33■□□□□ 0.2
COL6A2-202ENST00000310645 HAUS3Q68CZ6 603 aa16.33■□□□□ 0.2
COL6A2-202ENST00000310645 GNAT2P19087 354 aa16.33■□□□□ 0.2
COL6A2-202ENST00000310645 EIF4A3P38919 411 aaKnown RBP16.33■□□□□ 0.2
COL6A2-202ENST00000310645 GUCY2DQ02846 1103 aa16.33■□□□□ 0.2
COL6A2-202ENST00000310645 IFT88Q13099 833 aa16.33■□□□□ 0.2
COL6A2-202ENST00000310645 IQCA1Q86XH1 822 aa16.33■□□□□ 0.2
COL6A2-202ENST00000310645 SRBD1Q8N5C6 995 aaKnown RBP16.33■□□□□ 0.2
COL6A2-202ENST00000310645 TNFRSF25Q93038 417 aa16.33■□□□□ 0.2
COL6A2-202ENST00000310645 HPS3Q969F9 1004 aa16.33■□□□□ 0.2
COL6A2-202ENST00000310645 PLA2G12BQ9BX93 195 aa16.33■□□□□ 0.2
COL6A2-202ENST00000310645 THAP9Q9H5L6 903 aa16.33■□□□□ 0.2
COL6A2-202ENST00000310645 KAT6BQ8WYB5 2073 aa16.33■□□□□ 0.2
COL6A2-202ENST00000310645 MEFVO15553 781 aaPredicted RBP16.32■□□□□ 0.2
COL6A2-202ENST00000310645 GPKOWQ92917 476 aaPredicted RBP eCLIP16.32■□□□□ 0.2
COL6A2-202ENST00000310645 EPB41L5Q9HCM4 733 aa16.32■□□□□ 0.2
COL6A2-202ENST00000310645 DISC1Q9NRI5 854 aa16.32■□□□□ 0.2
COL6A2-202ENST00000310645 PHRF1Q9P1Y6 1649 aaKnown RBP16.32■□□□□ 0.2
COL6A2-202ENST00000310645 SSBP05455 408 aaKnown RBP eCLIP16.32■□□□□ 0.2
COL6A2-202ENST00000310645 LSP1P33241 339 aa16.32■□□□□ 0.2
COL6A2-202ENST00000310645 ANKRD40Q6AI12 368 aa16.32■□□□□ 0.2
COL6A2-202ENST00000310645 MAATS1Q7Z4T9 603 aa16.32■□□□□ 0.2
COL6A2-202ENST00000310645 ADGRA1Q86SQ6 560 aa16.32■□□□□ 0.2
COL6A2-202ENST00000310645 ALS2CR12Q96Q35 445 aa16.32■□□□□ 0.2
COL6A2-202ENST00000310645 HYOU1Q9Y4L1 999 aa16.32■□□□□ 0.2
COL6A2-202ENST00000310645 LAMB4A4D0S4 1761 aa16.32■□□□□ 0.2
COL6A2-202ENST00000310645 MYH13Q9UKX3 1938 aa16.32■□□□□ 0.2
COL6A2-202ENST00000310645 TRIM28Q13263 835 aaKnown RBP16.32■□□□□ 0.2
COL6A2-202ENST00000310645 FAM47AQ5JRC9 791 aa16.32■□□□□ 0.2
COL6A2-202ENST00000310645 ALS2CLQ60I27 953 aa16.32■□□□□ 0.2
COL6A2-202ENST00000310645 TTI2Q6NXR4 508 aa16.32■□□□□ 0.2
COL6A2-202ENST00000310645 EMBQ6PCB8 327 aa16.32■□□□□ 0.2
COL6A2-202ENST00000310645 TMC4Q7Z404 712 aa16.32■□□□□ 0.2
COL6A2-202ENST00000310645 CNPY4Q8N129 248 aa16.32■□□□□ 0.2
COL6A2-202ENST00000310645 PYM1Q9BRP8 204 aaKnown RBP16.32■□□□□ 0.2
COL6A2-202ENST00000310645 NUP58Q9BVL2 599 aa16.32■□□□□ 0.2
COL6A2-202ENST00000310645 PPANQ9NQ55 473 aaKnown RBP16.32■□□□□ 0.2
COL6A2-202ENST00000310645 MYH6P13533 1939 aa16.32■□□□□ 0.2
COL6A2-202ENST00000310645 RDXP35241 583 aaKnown RBP16.31■□□□□ 0.2
COL6A2-202ENST00000310645 MAGEA1P43355 309 aa16.31■□□□□ 0.2
COL6A2-202ENST00000310645 KIF11P52732 1056 aa16.31■□□□□ 0.2
COL6A2-202ENST00000310645 PDE4DQ08499 809 aa16.31■□□□□ 0.2
COL6A2-202ENST00000310645 DTHD1Q6ZMT9 781 aa16.31■□□□□ 0.2
COL6A2-202ENST00000310645 DUSP9Q99956 384 aaKnown RBP16.31■□□□□ 0.2
COL6A2-202ENST00000310645 TSGA10Q9BZW7 698 aa16.31■□□□□ 0.2
COL6A2-202ENST00000310645 GLI1P08151 1106 aa16.31■□□□□ 0.2
COL6A2-202ENST00000310645 RASSF7Q02833 373 aa16.31■□□□□ 0.2
COL6A2-202ENST00000310645 EVX2Q03828 476 aa16.31■□□□□ 0.2
COL6A2-202ENST00000310645 TROAPQ12815 778 aa16.31■□□□□ 0.2
COL6A2-202ENST00000310645 NAALADL2Q58DX5 795 aa16.31■□□□□ 0.2
COL6A2-202ENST00000310645 NAA35Q5VZE5 725 aa16.31■□□□□ 0.2
COL6A2-202ENST00000310645 PRPF38AQ8NAV1 312 aaKnown RBP16.31■□□□□ 0.2
COL6A2-202ENST00000310645 TTYH3Q9C0H2 523 aa16.31■□□□□ 0.2
COL6A2-202ENST00000310645 SH2D4AQ9H788 454 aa16.31■□□□□ 0.2
COL6A2-202ENST00000310645 ARHGAP20Q9P2F6 1191 aa16.31■□□□□ 0.2
COL6A2-202ENST00000310645 NID2Q14112 1375 aa16.31■□□□□ 0.2
COL6A2-202ENST00000310645 E7EVH7 732 aa16.31■□□□□ 0.2
COL6A2-202ENST00000310645 EPHB6O15197 1021 aa16.31■□□□□ 0.2
COL6A2-202ENST00000310645 ATP2C2O75185 946 aa16.31■□□□□ 0.2
COL6A2-202ENST00000310645 ENOX2Q16206 610 aaKnown RBP16.31■□□□□ 0.2
COL6A2-202ENST00000310645 GIGYF2Q6Y7W6 1299 aaKnown RBP16.31■□□□□ 0.2
COL6A2-202ENST00000310645 TMTC3Q6ZXV5 915 aa16.31■□□□□ 0.2
COL6A2-202ENST00000310645 RRAGAQ7L523 313 aa16.31■□□□□ 0.2
COL6A2-202ENST00000310645 ASAP1Q9ULH1 1129 aa16.31■□□□□ 0.2
COL6A2-202ENST00000310645 HEXIM1O94992 359 aaKnown RBP16.3■□□□□ 0.2
COL6A2-202ENST00000310645 FCER1AP12319 257 aa16.3■□□□□ 0.2
COL6A2-202ENST00000310645 SCG2P13521 617 aa16.3■□□□□ 0.2
COL6A2-202ENST00000310645 TCP1P17987 556 aaKnown RBP16.3■□□□□ 0.2
COL6A2-202ENST00000310645 DYNLL1P63167 89 aaKnown RBP16.3■□□□□ 0.2
COL6A2-202ENST00000310645 ASIC1P78348 528 aa16.3■□□□□ 0.2
COL6A2-202ENST00000310645 TRADDQ15628 312 aa16.3■□□□□ 0.2
COL6A2-202ENST00000310645 PURBQ96QR8 312 aaKnown RBP16.3■□□□□ 0.2
COL6A2-202ENST00000310645 SALL4Q9UJQ4 1053 aa16.3■□□□□ 0.2
COL6A2-202ENST00000310645 GSCP56915 257 aaPredicted RBP16.3■□□□□ 0.2
COL6A2-202ENST00000310645 SKOR1P84550 965 aa16.3■□□□□ 0.2
COL6A2-202ENST00000310645 HDLBPQ00341 1268 aaKnown RBP16.3■□□□□ 0.2
COL6A2-202ENST00000310645 ACTN3Q08043 901 aaPredicted RBP16.3■□□□□ 0.2
COL6A2-202ENST00000310645 TMEM60Q9H2L4 133 aa16.3■□□□□ 0.2
COL6A2-202ENST00000310645 PKD1L3Q7Z443 1732 aa16.29■□□□□ 0.2
COL6A2-202ENST00000310645 MAGEB6P1A0A0J9YX57 407 aa16.29■□□□□ 0.2
COL6A2-202ENST00000310645 ZNF233A6NK53 670 aa16.29■□□□□ 0.2
COL6A2-202ENST00000310645 NR1D1P20393 614 aa16.29■□□□□ 0.2
COL6A2-202ENST00000310645 LONP1P36776 959 aaKnown RBP16.29■□□□□ 0.2
COL6A2-202ENST00000310645 STK4Q13043 487 aa16.29■□□□□ 0.2
COL6A2-202ENST00000310645 ZNF473Q8WTR7 871 aaKnown RBP16.29■□□□□ 0.2
COL6A2-202ENST00000310645 RBM28Q9NW13 759 aaKnown RBP16.29■□□□□ 0.2
COL6A2-202ENST00000310645 KIF1AQ12756 1690 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms