RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 SHC4Q6S5L8 630 aa12.64□□□□□ -0.39
TRIM59-201ENST00000309784 SCYL3Q8IZE3 742 aa12.64□□□□□ -0.39
TRIM59-201ENST00000309784 WNT7AO00755 349 aa12.63□□□□□ -0.39
TRIM59-201ENST00000309784 ALAS1P13196 640 aa12.63□□□□□ -0.39
TRIM59-201ENST00000309784 NOVP48745 357 aa12.63□□□□□ -0.39
TRIM59-201ENST00000309784 DHX8Q14562 1220 aaKnown RBP12.63□□□□□ -0.39
TRIM59-201ENST00000309784 NPY5RQ15761 445 aa12.63□□□□□ -0.39
TRIM59-201ENST00000309784 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.63□□□□□ -0.39
TRIM59-201ENST00000309784 PTPREP23469 700 aa12.63□□□□□ -0.39
TRIM59-201ENST00000309784 AXDND1Q5T1B0 1012 aaPredicted RBP12.63□□□□□ -0.39
TRIM59-201ENST00000309784 TRIM44Q96DX7 344 aaPredicted RBP12.63□□□□□ -0.39
TRIM59-201ENST00000309784 EPSTI1Q96J88 318 aa12.63□□□□□ -0.39
TRIM59-201ENST00000309784 CCPG1Q9ULG6 757 aa12.63□□□□□ -0.39
TRIM59-201ENST00000309784 USP14P54578 494 aa12.63□□□□□ -0.39
TRIM59-201ENST00000309784 TRAF1Q13077 416 aa12.63□□□□□ -0.39
TRIM59-201ENST00000309784 FERMT2Q96AC1 680 aa12.63□□□□□ -0.39
TRIM59-201ENST00000309784 CDK5RAP3Q96JB5 506 aa12.63□□□□□ -0.39
TRIM59-201ENST00000309784 SRPRBQ9Y5M8 271 aaKnown RBP12.63□□□□□ -0.39
TRIM59-201ENST00000309784 GOLGA6L19H0YKK7 550 aa12.63□□□□□ -0.39
TRIM59-201ENST00000309784 PPP1R11O60927 126 aaPredicted RBP12.63□□□□□ -0.39
TRIM59-201ENST00000309784 PTMAP06454 111 aaKnown RBP12.63□□□□□ -0.39
TRIM59-201ENST00000309784 ANO6Q4KMQ2 910 aa12.63□□□□□ -0.39
TRIM59-201ENST00000309784 KIAA1755Q5JYT7 1200 aa12.63□□□□□ -0.39
TRIM59-201ENST00000309784 FAM160B2Q86V87 743 aa12.63□□□□□ -0.39
TRIM59-201ENST00000309784 ZNF280CQ8ND82 737 aa12.63□□□□□ -0.39
TRIM59-201ENST00000309784 SYMPKQ92797 1274 aaKnown RBP12.63□□□□□ -0.39
TRIM59-201ENST00000309784 DNAJC25Q9H1X3 360 aa12.63□□□□□ -0.39
TRIM59-201ENST00000309784 FEM1BQ9UK73 627 aa12.63□□□□□ -0.39
TRIM59-201ENST00000309784 IQCA1LA6NCM1 817 aa12.62□□□□□ -0.39
TRIM59-201ENST00000309784 UBXN2AP68543 259 aa12.62□□□□□ -0.39
TRIM59-201ENST00000309784 TMEM266Q2M3C6 531 aa12.62□□□□□ -0.39
TRIM59-201ENST00000309784 RPAP3Q9H6T3 665 aaPredicted RBP12.62□□□□□ -0.39
TRIM59-201ENST00000309784 FBXO2Q9UK22 296 aaPredicted RBP12.62□□□□□ -0.39
TRIM59-201ENST00000309784 MYH4Q9Y623 1939 aa12.62□□□□□ -0.39
TRIM59-201ENST00000309784 IREB2P48200 963 aaKnown RBP12.62□□□□□ -0.39
TRIM59-201ENST00000309784 USP49Q70CQ1 688 aa12.62□□□□□ -0.39
TRIM59-201ENST00000309784 STAMQ92783 540 aa12.62□□□□□ -0.39
TRIM59-201ENST00000309784 SLF1Q9BQI6 1058 aa12.62□□□□□ -0.39
TRIM59-201ENST00000309784 GLT8D2Q9H1C3 349 aa12.62□□□□□ -0.39
TRIM59-201ENST00000309784 RIC8AQ9NPQ8 531 aa12.62□□□□□ -0.39
TRIM59-201ENST00000309784 CALCRLQ16602 461 aa12.62□□□□□ -0.39
TRIM59-201ENST00000309784 FMR1NBQ8N0W7 255 aaPredicted RBP12.62□□□□□ -0.39
TRIM59-201ENST00000309784 OTUD5Q96G74 571 aa12.62□□□□□ -0.39
TRIM59-201ENST00000309784 SERTAD1Q9UHV2 236 aa12.62□□□□□ -0.39
TRIM59-201ENST00000309784 FOCADQ5VW36 1801 aa12.61□□□□□ -0.39
TRIM59-201ENST00000309784 PHF20L1A8MW92 1017 aa12.61□□□□□ -0.39
TRIM59-201ENST00000309784 TECP42680 631 aa12.61□□□□□ -0.39
TRIM59-201ENST00000309784 NSMFQ6X4W1 530 aa12.61□□□□□ -0.39
TRIM59-201ENST00000309784 GADL1Q6ZQY3 521 aa12.61□□□□□ -0.39
TRIM59-201ENST00000309784 DAGLBQ8NCG7 672 aa12.61□□□□□ -0.39
TRIM59-201ENST00000309784 ELP3Q9H9T3 547 aa12.61□□□□□ -0.39
TRIM59-201ENST00000309784 RAVER2Q9HCJ3 691 aaKnown RBP12.61□□□□□ -0.39
TRIM59-201ENST00000309784 COL2A1P02458 1487 aaPredicted RBP12.61□□□□□ -0.39
TRIM59-201ENST00000309784 BRCA1P38398 1863 aaKnown RBP12.61□□□□□ -0.39
TRIM59-201ENST00000309784 ZBED4O75132 1171 aa12.61□□□□□ -0.39
TRIM59-201ENST00000309784 TDP2O95551 362 aa12.61□□□□□ -0.39
TRIM59-201ENST00000309784 PPP1R18Q6NYC8 613 aa12.61□□□□□ -0.39
TRIM59-201ENST00000309784 PRPF38AQ8NAV1 312 aaKnown RBP12.61□□□□□ -0.39
TRIM59-201ENST00000309784 TNFRSF25Q93038 417 aa12.61□□□□□ -0.39
TRIM59-201ENST00000309784 ZFP91Q96JP5 570 aaPredicted RBP12.61□□□□□ -0.39
TRIM59-201ENST00000309784 GLTPD2A6NH11 291 aa12.61□□□□□ -0.39
TRIM59-201ENST00000309784 WDR46O15213 610 aaKnown RBP12.61□□□□□ -0.39
TRIM59-201ENST00000309784 OR52Z1P0C646 297 aa12.61□□□□□ -0.39
TRIM59-201ENST00000309784 PNOCQ13519 176 aa12.61□□□□□ -0.39
TRIM59-201ENST00000309784 RESP18Q5W5W9 173 aa12.61□□□□□ -0.39
TRIM59-201ENST00000309784 MOB2Q70IA6 237 aa12.61□□□□□ -0.39
TRIM59-201ENST00000309784 ANO3Q9BYT9 981 aa12.61□□□□□ -0.39
TRIM59-201ENST00000309784 PPP2R3BQ9Y5P8 575 aa12.61□□□□□ -0.39
TRIM59-201ENST00000309784 ESYT2A0FGR8 921 aa12.6□□□□□ -0.39
TRIM59-201ENST00000309784 PTPRAP18433 802 aa12.6□□□□□ -0.39
TRIM59-201ENST00000309784 VCAM1P19320 739 aa12.6□□□□□ -0.39
TRIM59-201ENST00000309784 ZNF165P49910 485 aa12.6□□□□□ -0.39
TRIM59-201ENST00000309784 ATP2C1P98194 919 aaPredicted RBP12.6□□□□□ -0.39
TRIM59-201ENST00000309784 SNW1Q13573 536 aaKnown RBP12.6□□□□□ -0.39
TRIM59-201ENST00000309784 LPAR1Q92633 364 aa12.6□□□□□ -0.39
TRIM59-201ENST00000309784 TMEM60Q9H2L4 133 aa12.6□□□□□ -0.39
TRIM59-201ENST00000309784 MRPL11Q9Y3B7 192 aaKnown RBP12.6□□□□□ -0.39
TRIM59-201ENST00000309784 STAT6P42226 847 aa12.6□□□□□ -0.39
TRIM59-201ENST00000309784 MAP3K9P80192 1104 aa12.6□□□□□ -0.39
TRIM59-201ENST00000309784 LONRF3Q496Y0 759 aa12.6□□□□□ -0.39
TRIM59-201ENST00000309784 MAP1SQ66K74 1059 aaPredicted RBP12.6□□□□□ -0.39
TRIM59-201ENST00000309784 LDHDQ86WU2 507 aa12.6□□□□□ -0.39
TRIM59-201ENST00000309784 AGBL1Q96MI9 1066 aa12.6□□□□□ -0.39
TRIM59-201ENST00000309784 RAB34Q9BZG1 259 aa12.6□□□□□ -0.39
TRIM59-201ENST00000309784 ANO10Q9NW15 660 aa12.6□□□□□ -0.39
TRIM59-201ENST00000309784 DDX25Q9UHL0 483 aaKnown RBP12.6□□□□□ -0.39
TRIM59-201ENST00000309784 GCOM1H8Y6P7 765 aaPredicted RBP12.6□□□□□ -0.39
TRIM59-201ENST00000309784 SSBP05455 408 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRIM59-201ENST00000309784 POLR2MP0CAP2 368 aa12.6□□□□□ -0.39
TRIM59-201ENST00000309784 BACE1P56817 501 aa12.6□□□□□ -0.39
TRIM59-201ENST00000309784 STX1AQ16623 288 aa12.6□□□□□ -0.39
TRIM59-201ENST00000309784 PRR16Q569H4 304 aa12.6□□□□□ -0.39
TRIM59-201ENST00000309784 WDR78Q5VTH9 848 aa12.6□□□□□ -0.39
TRIM59-201ENST00000309784 POTEDQ86YR6 584 aa12.6□□□□□ -0.39
TRIM59-201ENST00000309784 GRAMD1CQ8IYS0 662 aa12.6□□□□□ -0.39
TRIM59-201ENST00000309784 KLRG1Q96E93 195 aa12.6□□□□□ -0.39
TRIM59-201ENST00000309784 CCDC39Q9UFE4 941 aa12.6□□□□□ -0.39
TRIM59-201ENST00000309784 FSD2A1L4K1 749 aa12.59□□□□□ -0.39
TRIM59-201ENST00000309784 KIAA1683Q9H0B3 1180 aa12.59□□□□□ -0.39
TRIM59-201ENST00000309784 PP2D1A8MPX8 630 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 200.5 ms