RNA–Protein interactions for RNA: ENST00000308482.13

LRRFIP1-203, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRRFIP1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-203ENST00000308482 EPHB6O15197 1021 aa16.1■□□□□ 0.17
LRRFIP1-203ENST00000308482 SCG2P13521 617 aa16.1■□□□□ 0.17
LRRFIP1-203ENST00000308482 HAUS3Q68CZ6 603 aa16.1■□□□□ 0.17
LRRFIP1-203ENST00000308482 CCDC170Q8IYT3 715 aa16.1■□□□□ 0.17
LRRFIP1-203ENST00000308482 GPKOWQ92917 476 aaPredicted RBP eCLIP16.1■□□□□ 0.17
LRRFIP1-203ENST00000308482 CNOT6LQ96LI5 555 aaKnown RBP16.1■□□□□ 0.17
LRRFIP1-203ENST00000308482 OSBPL9Q96SU4 736 aa16.1■□□□□ 0.17
LRRFIP1-203ENST00000308482 TMEM60Q9H2L4 133 aa16.1■□□□□ 0.17
LRRFIP1-203ENST00000308482 RBM28Q9NW13 759 aaKnown RBP16.1■□□□□ 0.17
LRRFIP1-203ENST00000308482 MYH3P11055 1940 aa16.1■□□□□ 0.17
LRRFIP1-203ENST00000308482 MAGEB6P1A0A0J9YX57 407 aa16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 WTIPA6NIX2 430 aaPredicted RBP16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 ZEB2O60315 1214 aa16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 FAM47AQ5JRC9 791 aa16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 ANKRD40Q6AI12 368 aa16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 FNBP4Q8N3X1 1017 aaPredicted RBP16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 ZIM3Q96PE6 472 aa16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 IFIH1Q9BYX4 1025 aaKnown RBP16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 SALL4Q9UJQ4 1053 aa16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 BAZ2AQ9UIF9 1905 aaKnown RBP16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 ZSCAN5CA6NGD5 496 aaPredicted RBP16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 MYO1FO00160 1098 aa16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 NDUFAB1O14561 156 aa16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 ERCC3P19447 782 aa16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 LONP1P36776 959 aaKnown RBP16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 MTIF2P46199 727 aaKnown RBP16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 SPA17Q15506 151 aa16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 MIIPQ5JXC2 388 aa16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 IQCA1Q86XH1 822 aa16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 C2CD5Q86YS7 1000 aa16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 GIMAP8Q8ND71 665 aaPredicted RBP16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 HPS3Q969F9 1004 aa16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 MYCBPQ99417 103 aaPredicted RBP16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 ARHGAP20Q9P2F6 1191 aa16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 CAPN7Q9Y6W3 813 aa16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 ESYT3A0FGR9 886 aa16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 PIGBQ92521 554 aa16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 MS4A14Q96JA4 679 aa16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 RUFY1Q96T51 708 aa16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 PYM1Q9BRP8 204 aaKnown RBP16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 NOC4LQ9BVI4 516 aaKnown RBP16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 SH2D4AQ9H788 454 aa16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 RBM12Q9NTZ6 932 aaKnown RBP16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 PCDHA13Q9Y5I0 950 aa16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 PAPPAQ13219 1627 aa16.09■□□□□ 0.17
LRRFIP1-203ENST00000308482 ZPR1O75312 459 aa16.08■□□□□ 0.16
LRRFIP1-203ENST00000308482 STARD3NLO95772 234 aa16.08■□□□□ 0.16
LRRFIP1-203ENST00000308482 FCER1AP12319 257 aa16.08■□□□□ 0.16
LRRFIP1-203ENST00000308482 STK4Q13043 487 aa16.08■□□□□ 0.16
LRRFIP1-203ENST00000308482 GBP6Q6ZN66 633 aa16.08■□□□□ 0.16
LRRFIP1-203ENST00000308482 TRIM58Q8NG06 486 aa16.08■□□□□ 0.16
LRRFIP1-203ENST00000308482 PRDM11Q9NQV5 511 aa16.08■□□□□ 0.16
LRRFIP1-203ENST00000308482 STIM2Q9P246 746 aa16.08■□□□□ 0.16
LRRFIP1-203ENST00000308482 ANAPC4Q9UJX5 808 aa16.08■□□□□ 0.16
LRRFIP1-203ENST00000308482 ZBTB1Q9Y2K1 713 aa16.08■□□□□ 0.16
LRRFIP1-203ENST00000308482 OPA1O60313 960 aa16.08■□□□□ 0.16
LRRFIP1-203ENST00000308482 TACC1O75410 805 aa16.08■□□□□ 0.16
LRRFIP1-203ENST00000308482 RHOBTB3O94955 611 aa16.08■□□□□ 0.16
LRRFIP1-203ENST00000308482 FAM153BP0C7A2 387 aa16.08■□□□□ 0.16
LRRFIP1-203ENST00000308482 DNA2P51530 1060 aa16.08■□□□□ 0.16
LRRFIP1-203ENST00000308482 EPHB4P54760 987 aa16.08■□□□□ 0.16
LRRFIP1-203ENST00000308482 APBA1Q02410 837 aa16.08■□□□□ 0.16
LRRFIP1-203ENST00000308482 FAM153CQ494X1 144 aa16.08■□□□□ 0.16
LRRFIP1-203ENST00000308482 SWT1Q5T5J6 900 aaKnown RBP16.08■□□□□ 0.16
LRRFIP1-203ENST00000308482 FAM207AQ9NSI2 230 aaPredicted RBP16.08■□□□□ 0.16
LRRFIP1-203ENST00000308482 FAM153AQ9UHL3 310 aa16.08■□□□□ 0.16
LRRFIP1-203ENST00000308482 HSF2BPO75031 334 aa16.07■□□□□ 0.16
LRRFIP1-203ENST00000308482 IL2RBP14784 551 aa16.07■□□□□ 0.16
LRRFIP1-203ENST00000308482 TRAPPC10P48553 1259 aa16.07■□□□□ 0.16
LRRFIP1-203ENST00000308482 GUCY1A3Q02108 690 aa16.07■□□□□ 0.16
LRRFIP1-203ENST00000308482 SLC4A8Q2Y0W8 1093 aa16.07■□□□□ 0.16
LRRFIP1-203ENST00000308482 CCDC178Q5BJE1 867 aa16.07■□□□□ 0.16
LRRFIP1-203ENST00000308482 CCDC181Q5TID7 509 aa16.07■□□□□ 0.16
LRRFIP1-203ENST00000308482 NUP58Q9BVL2 599 aa16.07■□□□□ 0.16
LRRFIP1-203ENST00000308482 ATF3P18847 181 aa16.07■□□□□ 0.16
LRRFIP1-203ENST00000308482 EIF4A3P38919 411 aaKnown RBP16.07■□□□□ 0.16
LRRFIP1-203ENST00000308482 ATP2B2Q01814 1243 aa16.07■□□□□ 0.16
LRRFIP1-203ENST00000308482 NNTQ13423 1086 aa16.07■□□□□ 0.16
LRRFIP1-203ENST00000308482 KCNB1Q14721 858 aa16.07■□□□□ 0.16
LRRFIP1-203ENST00000308482 ARL6IP4Q66PJ3 421 aaKnown RBP16.07■□□□□ 0.16
LRRFIP1-203ENST00000308482 CEP89Q96ST8 783 aa16.07■□□□□ 0.16
LRRFIP1-203ENST00000308482 RIOK1Q9BRS2 568 aaKnown RBP16.07■□□□□ 0.16
LRRFIP1-203ENST00000308482 KAT6BQ8WYB5 2073 aa16.06■□□□□ 0.16
LRRFIP1-203ENST00000308482 UBA7P41226 1012 aa16.06■□□□□ 0.16
LRRFIP1-203ENST00000308482 CARSP49589 748 aaKnown RBP16.06■□□□□ 0.16
LRRFIP1-203ENST00000308482 KIF11P52732 1056 aa16.06■□□□□ 0.16
LRRFIP1-203ENST00000308482 PFKFB3Q16875 520 aaPredicted RBP16.06■□□□□ 0.16
LRRFIP1-203ENST00000308482 DTHD1Q6ZMT9 781 aa16.06■□□□□ 0.16
LRRFIP1-203ENST00000308482 P2RX5Q93086 422 aa16.06■□□□□ 0.16
LRRFIP1-203ENST00000308482 RNPC3Q96LT9 517 aaKnown RBP16.06■□□□□ 0.16
LRRFIP1-203ENST00000308482 BUB1O43683 1085 aa16.06■□□□□ 0.16
LRRFIP1-203ENST00000308482 USO1O60763 962 aaKnown RBP16.06■□□□□ 0.16
LRRFIP1-203ENST00000308482 GLI1P08151 1106 aa16.06■□□□□ 0.16
LRRFIP1-203ENST00000308482 SKOR1P84550 965 aa16.06■□□□□ 0.16
LRRFIP1-203ENST00000308482 PDE4DQ08499 809 aa16.06■□□□□ 0.16
LRRFIP1-203ENST00000308482 C8orf74Q6P047 294 aa16.06■□□□□ 0.16
LRRFIP1-203ENST00000308482 TMC4Q7Z404 712 aa16.06■□□□□ 0.16
LRRFIP1-203ENST00000308482 CCDC43Q96MW1 224 aaKnown RBP16.06■□□□□ 0.16
LRRFIP1-203ENST00000308482 SLC4A9Q96Q91 983 aa16.06■□□□□ 0.16
LRRFIP1-203ENST00000308482 TSGA10Q9BZW7 698 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms