RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 CCDC12Q8WUD4 166 aaPredicted RBP7.97□□□□□ -1.13
PTCD2-201ENST00000308077 FEZ1Q99689 392 aa7.97□□□□□ -1.13
PTCD2-201ENST00000308077 KIAA1683Q9H0B3 1180 aa7.97□□□□□ -1.13
PTCD2-201ENST00000308077 GOLPH3LQ9H4A5 285 aa7.97□□□□□ -1.13
PTCD2-201ENST00000308077 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.97□□□□□ -1.13
PTCD2-201ENST00000308077 PRR12Q9ULL5 1215 aa7.97□□□□□ -1.13
PTCD2-201ENST00000308077 PTPRFP10586 1907 aa7.97□□□□□ -1.13
PTCD2-201ENST00000308077 POTEIP0CG38 1075 aa7.97□□□□□ -1.13
PTCD2-201ENST00000308077 POTEJP0CG39 1038 aa7.97□□□□□ -1.13
PTCD2-201ENST00000308077 ME1P48163 572 aa7.97□□□□□ -1.13
PTCD2-201ENST00000308077 MTMR2Q13614 643 aa7.97□□□□□ -1.13
PTCD2-201ENST00000308077 ZSCAN23Q3MJ62 389 aa7.97□□□□□ -1.13
PTCD2-201ENST00000308077 EAPPQ56P03 285 aaPredicted RBP7.97□□□□□ -1.13
PTCD2-201ENST00000308077 PPP1R18Q6NYC8 613 aa7.97□□□□□ -1.13
PTCD2-201ENST00000308077 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.97□□□□□ -1.13
PTCD2-201ENST00000308077 CDCA5Q96FF9 252 aa7.97□□□□□ -1.13
PTCD2-201ENST00000308077 WDR18Q9BV38 432 aa7.97□□□□□ -1.13
PTCD2-201ENST00000308077 C6orf50Q9HD87 102 aa7.97□□□□□ -1.13
PTCD2-201ENST00000308077 EMILIN3Q9NT22 766 aa7.97□□□□□ -1.13
PTCD2-201ENST00000308077 FBXO28Q9NVF7 368 aa7.97□□□□□ -1.13
PTCD2-201ENST00000308077 MRVI1Q9Y6F6 885 aa7.97□□□□□ -1.13
PTCD2-201ENST00000308077 RLFQ13129 1914 aa7.96□□□□□ -1.13
PTCD2-201ENST00000308077 IQCA1LA6NCM1 817 aa7.96□□□□□ -1.14
PTCD2-201ENST00000308077 GOLGA6L4A6NEF3 574 aa7.96□□□□□ -1.14
PTCD2-201ENST00000308077 PLA2G6O60733 806 aa7.96□□□□□ -1.14
PTCD2-201ENST00000308077 PPP6R2O75170 966 aa7.96□□□□□ -1.14
PTCD2-201ENST00000308077 GNA11P29992 359 aa7.96□□□□□ -1.14
PTCD2-201ENST00000308077 SPP2Q13103 211 aa7.96□□□□□ -1.14
PTCD2-201ENST00000308077 TTC38Q5R3I4 469 aa7.96□□□□□ -1.14
PTCD2-201ENST00000308077 ADALQ6DHV7 355 aa7.96□□□□□ -1.14
PTCD2-201ENST00000308077 CCAR1Q8IX12 1150 aaKnown RBP7.96□□□□□ -1.14
PTCD2-201ENST00000308077 BICD2Q8TD16 824 aa7.96□□□□□ -1.14
PTCD2-201ENST00000308077 PICK1Q9NRD5 415 aa7.96□□□□□ -1.14
PTCD2-201ENST00000308077 TMEM260Q9NX78 707 aa7.96□□□□□ -1.14
PTCD2-201ENST00000308077 BIN2Q9UBW5 565 aaPredicted RBP7.96□□□□□ -1.14
PTCD2-201ENST00000308077 NOL7Q9UMY1 257 aaKnown RBP7.96□□□□□ -1.14
PTCD2-201ENST00000308077 SNCAIPQ9Y6H5 919 aa7.96□□□□□ -1.14
PTCD2-201ENST00000308077 TRIM75PA6NK02 468 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 WDR46O15213 610 aaKnown RBP7.95□□□□□ -1.14
PTCD2-201ENST00000308077 NR1I2O75469 434 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 VCAM1P19320 739 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 CLK2P49760 499 aaKnown RBP7.95□□□□□ -1.14
PTCD2-201ENST00000308077 ADCY7P51828 1080 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 BACE1P56817 501 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 GRIN1Q05586 938 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 VGLL4Q14135 290 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 ZNF174Q15697 407 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 UBE2SQ16763 222 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 INF2Q27J81 1249 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 JAKMIP3Q5VZ66 844 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 MOB2Q70IA6 237 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 ZNF280CQ8ND82 737 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 LPAR1Q92633 364 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 KIFC2Q96AC6 838 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 CLIC6Q96NY7 704 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 RANBP17Q9H2T7 1088 aaKnown RBP7.95□□□□□ -1.14
PTCD2-201ENST00000308077 AS3MTQ9HBK9 375 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 RIC8AQ9NPQ8 531 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 TSKSQ9UJT2 592 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 FEM1BQ9UK73 627 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 PCDHA1Q9Y5I3 950 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 ZHX2Q9Y6X8 837 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 MYH7BA7E2Y1 1941 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 CCDC194A0A1B0GVG4 234 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 A0A1W2PQ27 194 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 A0A1W2PQ64 194 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 A0A1W2PQD8 194 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 EDIL3O43854 480 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 TRAPPC10P48553 1259 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 MAP3K9P80192 1104 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 SNW1Q13573 536 aaKnown RBP7.95□□□□□ -1.14
PTCD2-201ENST00000308077 USH1GQ495M9 461 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 CCDC183Q5T5S1 534 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 KRT25Q7Z3Z0 450 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 PNMA8AQ86V59 439 aaPredicted RBP7.95□□□□□ -1.14
PTCD2-201ENST00000308077 FAM160B2Q86V87 743 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 GAS2L3Q86XJ1 694 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 FBXO11Q86XK2 927 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 REXO1Q8N1G1 1221 aaKnown RBP7.95□□□□□ -1.14
PTCD2-201ENST00000308077 FSIP1Q8NA03 581 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 ENGASEQ8NFI3 743 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 CHURC1Q8WUH1 139 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 AMNQ9BXJ7 453 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 DACT1Q9NYF0 836 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 FBXO2Q9UK22 296 aaPredicted RBP7.95□□□□□ -1.14
PTCD2-201ENST00000308077 AFG3L2Q9Y4W6 797 aa7.95□□□□□ -1.14
PTCD2-201ENST00000308077 MORC2Q9Y6X9 1032 aaPredicted RBP7.95□□□□□ -1.14
PTCD2-201ENST00000308077 COL11A1P12107 1806 aaPredicted RBP7.95□□□□□ -1.14
PTCD2-201ENST00000308077 A0A1B0GVL5 298 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 SYCE3A1L190 88 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 OPLAHO14841 1288 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 PTPREP23469 700 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 USP14P54578 494 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 HMGCS2P54868 508 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 ZNF445P59923 1031 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 NONOQ15233 471 aaKnown RBP eCLIP7.94□□□□□ -1.14
PTCD2-201ENST00000308077 CCDC174Q6PII3 467 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 SHC4Q6S5L8 630 aa7.94□□□□□ -1.14
PTCD2-201ENST00000308077 SAMD1Q6SPF0 538 aaPredicted RBP7.94□□□□□ -1.14
PTCD2-201ENST00000308077 MRPS27Q92552 414 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms