RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 SKIV2LQ15477 1246 aaKnown RBP11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 SLC15A2Q16348 729 aa11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 CEP170P1Q96L14 293 aa11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 FEM1BQ9UK73 627 aa11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 AKR1B15C9JRZ8 316 aaPredicted RBP11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 GNAT1P11488 350 aa11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 DPEP1P16444 411 aa11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 SPP2Q13103 211 aa11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 PDXDC2PQ6P474 469 aa11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 RASGRP4Q8TDF6 673 aa11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 ZNF830Q96NB3 372 aaPredicted RBP11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 PPANQ9NQ55 473 aaKnown RBP11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 PSAPP07602 524 aa11.82□□□□□ -0.52
SYNPO2-201ENST00000307142 MYO1AQ9UBC5 1043 aa11.82□□□□□ -0.52
SYNPO2-201ENST00000307142 ZBBXA8MT70 800 aa11.82□□□□□ -0.52
SYNPO2-201ENST00000307142 PI4K2BQ8TCG2 481 aa11.82□□□□□ -0.52
SYNPO2-201ENST00000307142 ANKRD36BP1Q96IX9 119 aa11.82□□□□□ -0.52
SYNPO2-201ENST00000307142 GNA14O95837 355 aa11.82□□□□□ -0.52
SYNPO2-201ENST00000307142 GSPT1P15170 499 aaKnown RBP11.82□□□□□ -0.52
SYNPO2-201ENST00000307142 UBE2SQ16763 222 aa11.82□□□□□ -0.52
SYNPO2-201ENST00000307142 SNRNP48Q6IEG0 339 aaKnown RBP11.82□□□□□ -0.52
SYNPO2-201ENST00000307142 CNGA4Q8IV77 575 aa11.82□□□□□ -0.52
SYNPO2-201ENST00000307142 GOLGA5Q8TBA6 731 aa11.82□□□□□ -0.52
SYNPO2-201ENST00000307142 MYO3AQ8NEV4 1616 aa11.82□□□□□ -0.52
SYNPO2-201ENST00000307142 FAM49AQ9H0Q0 323 aaPredicted RBP11.82□□□□□ -0.52
SYNPO2-201ENST00000307142 MAP2P11137 1827 aaKnown RBP11.82□□□□□ -0.52
SYNPO2-201ENST00000307142 SRGAP2CP0DJJ0 459 aa11.82□□□□□ -0.52
SYNPO2-201ENST00000307142 MYOCDQ8IZQ8 938 aa11.82□□□□□ -0.52
SYNPO2-201ENST00000307142 GSDMBQ8TAX9 411 aa11.82□□□□□ -0.52
SYNPO2-201ENST00000307142 KMT5AQ9NQR1 393 aa11.82□□□□□ -0.52
SYNPO2-201ENST00000307142 AGLP35573 1532 aa11.82□□□□□ -0.52
SYNPO2-201ENST00000307142 FCER1AP12319 257 aa11.82□□□□□ -0.52
SYNPO2-201ENST00000307142 IPO4Q8TEX9 1081 aaKnown RBP11.82□□□□□ -0.52
SYNPO2-201ENST00000307142 COL4A3BPQ9Y5P4 624 aa11.82□□□□□ -0.52
SYNPO2-201ENST00000307142 XRCC5P13010 732 aaKnown RBP11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 TNNC1P63316 161 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 SCARF1Q14162 830 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 ZNF589Q86UQ0 364 aaPredicted RBP11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 IGSF22Q8N9C0 903 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 KIAA1524Q8TCG1 905 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 LARSQ9P2J5 1176 aaKnown RBP11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 PTGDRQ13258 359 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 PNOCQ13519 176 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 RAB3IL1Q8TBN0 382 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 CCDC127Q96BQ5 260 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 CCDC77Q9BR77 488 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 CSRNP2Q9H175 543 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 CELF2O95319 508 aaKnown RBP11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 ELMSAN1Q6PJG2 1045 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 NLRP4Q96MN2 994 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 DISC1Q9NRI5 854 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 SERTAD1Q9UHV2 236 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 HNRNPDLO14979 420 aaKnown RBP11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 C7orf31Q8N865 590 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 DCAF4Q8WV16 495 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 MROH7-TTC4A0A0A0MT08 1334 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 ODR4Q5SWX8 454 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 PRR5LQ6MZQ0 368 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 SCYL2Q6P3W7 929 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 ZBTB33Q86T24 672 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 CEP112Q8N8E3 955 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 C1orf112Q9NSG2 853 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 PNMA6FA0A0J9YX94 578 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 CCDC186Q7Z3E2 898 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 UBL4BQ8N7F7 174 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 TM6SF1Q9BZW5 370 aa11.81□□□□□ -0.52
SYNPO2-201ENST00000307142 SHTN1A0MZ66 631 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 OSBP2Q969R2 916 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 GCNAQ96QF7 691 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 WDR11Q9BZH6 1224 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 KIF9Q9HAQ2 790 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 ERCC5P28715 1186 aaPredicted RBP11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 ZNF569Q5MCW4 686 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 TBCKQ8TEA7 893 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 SNX25Q9H3E2 840 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 HESX1Q9UBX0 185 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 DNAI1Q9UI46 699 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 SYNJ2BP-COX16A0A087WUM0 186 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 TNPO2O14787 897 aaKnown RBP11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 PFKFB2O60825 505 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 CYP2D6P10635 497 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 STXBP2Q15833 593 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 UAP1Q16222 522 aaPredicted RBP11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 COX16Q9P0S2 106 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 NEXMIFQ5QGS0 1516 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 PDIA3P30101 505 aaKnown RBP11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 KRT81Q14533 505 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 CRAMP1Q96RY5 1269 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 LSM14BQ9BX40 385 aaKnown RBP11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 TAB2Q9NYJ8 693 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 TPCN1Q9ULQ1 816 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 ZBTB12Q9Y330 459 aaPredicted RBP11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 MED14O60244 1454 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 BTBD18B2RXH4 712 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 CCDC122Q5T0U0 273 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 NUP58Q9BVL2 599 aa11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 SRRTQ9BXP5 876 aaKnown RBP11.8□□□□□ -0.52
SYNPO2-201ENST00000307142 MEIS1O00470 390 aa11.79□□□□□ -0.52
SYNPO2-201ENST00000307142 ITKQ08881 620 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms