RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ABI1Q8IZP0 508 aa10.33□□□□□ -0.76
PTPRE-202ENST00000306042 FBXO18Q8NFZ0 1043 aa10.33□□□□□ -0.76
PTPRE-202ENST00000306042 TBC1D7Q9P0N9 293 aa10.33□□□□□ -0.76
PTPRE-202ENST00000306042 LARSQ9P2J5 1176 aaKnown RBP10.33□□□□□ -0.76
PTPRE-202ENST00000306042 CEP83Q9Y592 693 aa10.33□□□□□ -0.76
PTPRE-202ENST00000306042 LRRIQ4A6NIV6 560 aa10.33□□□□□ -0.76
PTPRE-202ENST00000306042 SLC8A3P57103 927 aa10.33□□□□□ -0.76
PTPRE-202ENST00000306042 GPS2Q13227 327 aa10.33□□□□□ -0.76
PTPRE-202ENST00000306042 ENAHQ8N8S7 591 aaPredicted RBP10.33□□□□□ -0.76
PTPRE-202ENST00000306042 DPF2Q92785 391 aa10.33□□□□□ -0.76
PTPRE-202ENST00000306042 RUFY1Q96T51 708 aa10.33□□□□□ -0.76
PTPRE-202ENST00000306042 NALCNQ8IZF0 1738 aa10.33□□□□□ -0.76
PTPRE-202ENST00000306042 CETN3O15182 167 aa10.33□□□□□ -0.76
PTPRE-202ENST00000306042 MYL3P08590 195 aa10.33□□□□□ -0.76
PTPRE-202ENST00000306042 USP50Q70EL3 339 aaPredicted RBP10.33□□□□□ -0.76
PTPRE-202ENST00000306042 USP25Q9UHP3 1055 aa10.33□□□□□ -0.76
PTPRE-202ENST00000306042 MACROD2A1Z1Q3 448 aa10.33□□□□□ -0.76
PTPRE-202ENST00000306042 ATRNO75882 1429 aa10.33□□□□□ -0.76
PTPRE-202ENST00000306042 SBK1Q52WX2 424 aa10.33□□□□□ -0.76
PTPRE-202ENST00000306042 EXOC8Q8IYI6 725 aa10.33□□□□□ -0.76
PTPRE-202ENST00000306042 SCYL3Q8IZE3 742 aa10.33□□□□□ -0.76
PTPRE-202ENST00000306042 EXOC3O60645 756 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 TRAPPC10P48553 1259 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 ERO1BQ86YB8 467 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 MSANTD4Q8NCY6 345 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 MTA3Q9BTC8 594 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 TEX13BQ9BXU2 312 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 ANO3Q9BYT9 981 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 PLEKHA8P1O95397 391 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 IL1R1P14778 569 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 AKT1S1Q96B36 256 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 CPVLQ9H3G5 476 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 SLIT2O94813 1529 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 ASB14A6NK59 587 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 AKR1B10O60218 316 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 UBASH3AP57075 661 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 PTGDRQ13258 359 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 AP3B2Q13367 1082 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 TTLL4Q14679 1199 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 ODR4Q5SWX8 454 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 PDXDC2PQ6P474 469 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 TMTC3Q6ZXV5 915 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 ZKSCAN4Q969J2 545 aaPredicted RBP10.32□□□□□ -0.76
PTPRE-202ENST00000306042 LBHD1Q9BQE6 289 aaPredicted RBP10.32□□□□□ -0.76
PTPRE-202ENST00000306042 FOXP1Q9H334 677 aaPredicted RBP10.32□□□□□ -0.76
PTPRE-202ENST00000306042 BCL2L12Q9HB09 334 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 LRFN2Q9ULH4 789 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 PCDHB13Q9Y5F0 798 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 BCL9LQ86UU0 1499 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 PSAPP07602 524 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 NOP2P46087 812 aaKnown RBP10.32□□□□□ -0.76
PTPRE-202ENST00000306042 YARSP54577 528 aaKnown RBP10.32□□□□□ -0.76
PTPRE-202ENST00000306042 ANO6Q4KMQ2 910 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 TMC6Q7Z403 805 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 PPP2R3CQ969Q6 453 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 GLIS2Q9BZE0 524 aaPredicted RBP10.32□□□□□ -0.76
PTPRE-202ENST00000306042 GINM1Q9NU53 330 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 MTMR4Q9NYA4 1195 aa10.32□□□□□ -0.76
PTPRE-202ENST00000306042 ZNF609O15014 1411 aa10.31□□□□□ -0.76
PTPRE-202ENST00000306042 KRT19P08727 400 aa10.31□□□□□ -0.76
PTPRE-202ENST00000306042 CTNNA2P26232 953 aa10.31□□□□□ -0.76
PTPRE-202ENST00000306042 LIG4P49917 911 aa10.31□□□□□ -0.76
PTPRE-202ENST00000306042 TBC1D8BQ0IIM8 1120 aa10.31□□□□□ -0.76
PTPRE-202ENST00000306042 DMP1Q13316 513 aaPredicted RBP10.31□□□□□ -0.76
PTPRE-202ENST00000306042 PPP2R5AQ15172 486 aa10.31□□□□□ -0.76
PTPRE-202ENST00000306042 GIMAP8Q8ND71 665 aaPredicted RBP10.31□□□□□ -0.76
PTPRE-202ENST00000306042 CCDC102AQ96A19 550 aa10.31□□□□□ -0.76
PTPRE-202ENST00000306042 NYAP2Q9P242 653 aa10.31□□□□□ -0.76
PTPRE-202ENST00000306042 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.31□□□□□ -0.76
PTPRE-202ENST00000306042 PPP4CP60510 307 aa10.31□□□□□ -0.76
PTPRE-202ENST00000306042 LEO1Q8WVC0 666 aaPredicted RBP10.31□□□□□ -0.76
PTPRE-202ENST00000306042 VCPKMTQ9H867 229 aa10.31□□□□□ -0.76
PTPRE-202ENST00000306042 LAD1O00515 517 aa10.31□□□□□ -0.76
PTPRE-202ENST00000306042 ONECUT3O60422 494 aaPredicted RBP10.31□□□□□ -0.76
PTPRE-202ENST00000306042 TNNT1P13805 278 aa10.31□□□□□ -0.76
PTPRE-202ENST00000306042 REM2Q8IYK8 340 aaPredicted RBP10.31□□□□□ -0.76
PTPRE-202ENST00000306042 AOPEPQ8N6M6 819 aa10.31□□□□□ -0.76
PTPRE-202ENST00000306042 MB21D1Q8N884 522 aa10.31□□□□□ -0.76
PTPRE-202ENST00000306042 MAPK8IP1Q9UQF2 711 aa10.31□□□□□ -0.76
PTPRE-202ENST00000306042 QRICH1Q2TAL8 776 aa10.31□□□□□ -0.76
PTPRE-202ENST00000306042 GLIPR1L2Q4G1C9 344 aa10.31□□□□□ -0.76
PTPRE-202ENST00000306042 CCDC84Q86UT8 332 aaPredicted RBP10.31□□□□□ -0.76
PTPRE-202ENST00000306042 NELFCDQ8IXH7 590 aa10.31□□□□□ -0.76
PTPRE-202ENST00000306042 GPRC5AQ8NFJ5 357 aa10.31□□□□□ -0.76
PTPRE-202ENST00000306042 KAZALD1Q96I82 304 aa10.31□□□□□ -0.76
PTPRE-202ENST00000306042 CEP170P1Q96L14 293 aa10.31□□□□□ -0.76
PTPRE-202ENST00000306042 DNAJC25Q9H1X3 360 aa10.31□□□□□ -0.76
PTPRE-202ENST00000306042 TSPYL2Q9H2G4 693 aaPredicted RBP10.31□□□□□ -0.76
PTPRE-202ENST00000306042 NFAT5O94916 1531 aa10.3□□□□□ -0.76
PTPRE-202ENST00000306042 GNAT1P11488 350 aa10.3□□□□□ -0.76
PTPRE-202ENST00000306042 C16orf86Q6ZW13 317 aa10.3□□□□□ -0.76
PTPRE-202ENST00000306042 CYB5R4Q7L1T6 521 aa10.3□□□□□ -0.76
PTPRE-202ENST00000306042 FAM178BQ8IXR5 827 aa10.3□□□□□ -0.76
PTPRE-202ENST00000306042 NEK11Q8NG66 645 aa10.3□□□□□ -0.76
PTPRE-202ENST00000306042 STAMQ92783 540 aa10.3□□□□□ -0.76
PTPRE-202ENST00000306042 NDUFB10O96000 172 aa10.3□□□□□ -0.76
PTPRE-202ENST00000306042 ZSCAN20P17040 1043 aaPredicted RBP10.3□□□□□ -0.76
PTPRE-202ENST00000306042 GRM4Q14833 912 aa10.3□□□□□ -0.76
PTPRE-202ENST00000306042 NBPF12Q5TAG4 269 aaPredicted RBP10.3□□□□□ -0.76
PTPRE-202ENST00000306042 LDHDQ86WU2 507 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms