RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 SPEF2Q9C093 1822 aa6.88□□□□□ -1.31
ZNF440-201ENST00000304060 M0QZ92 97 aa6.88□□□□□ -1.31
ZNF440-201ENST00000304060 ARMCX2Q7L311 632 aa6.88□□□□□ -1.31
ZNF440-201ENST00000304060 HERC6Q8IVU3 1022 aa6.88□□□□□ -1.31
ZNF440-201ENST00000304060 ACER1Q8TDN7 264 aa6.88□□□□□ -1.31
ZNF440-201ENST00000304060 SSH1Q8WYL5 1049 aa6.88□□□□□ -1.31
ZNF440-201ENST00000304060 BCCIPQ9P287 314 aaKnown RBP eCLIP6.88□□□□□ -1.31
ZNF440-201ENST00000304060 PGK2P07205 417 aa6.88□□□□□ -1.31
ZNF440-201ENST00000304060 TSPY3P0CV98 308 aa6.88□□□□□ -1.31
ZNF440-201ENST00000304060 TSPY8P0CW00 308 aa6.88□□□□□ -1.31
ZNF440-201ENST00000304060 BMP3P12645 472 aa6.88□□□□□ -1.31
ZNF440-201ENST00000304060 SLC1A4P43007 532 aa6.88□□□□□ -1.31
ZNF440-201ENST00000304060 CCDC144BQ3MJ40 725 aa6.88□□□□□ -1.31
ZNF440-201ENST00000304060 CNKSR3Q6P9H4 555 aa6.88□□□□□ -1.31
ZNF440-201ENST00000304060 TCEAL9Q9UHQ7 104 aa6.88□□□□□ -1.31
ZNF440-201ENST00000304060 ZBED9Q6R2W3 1325 aa6.88□□□□□ -1.31
ZNF440-201ENST00000304060 PIEZO1Q92508 2521 aa6.88□□□□□ -1.31
ZNF440-201ENST00000304060 CARNS1A5YM72 827 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 COBLO75128 1261 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 CA3P07451 260 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 ZFYP08048 801 aaPredicted RBP6.87□□□□□ -1.31
ZNF440-201ENST00000304060 LEXMQ3ZCV2 418 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 CXCL17Q6UXB2 119 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 SLC4A4Q9Y6R1 1079 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 PITPNM1O00562 1244 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 BMP1P13497 986 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 HNRNPUQ00839 825 aaKnown RBP eCLIP6.87□□□□□ -1.31
ZNF440-201ENST00000304060 METTL16Q86W50 562 aaKnown RBP6.87□□□□□ -1.31
ZNF440-201ENST00000304060 C11orf84Q9BUA3 381 aaPredicted RBP6.87□□□□□ -1.31
ZNF440-201ENST00000304060 NYAP2Q9P242 653 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 DDX60LQ5H9U9 1706 aaKnown RBP6.87□□□□□ -1.31
ZNF440-201ENST00000304060 MINDY4BA8MYZ0 360 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 HSP90AA1P07900 732 aaKnown RBP6.87□□□□□ -1.31
ZNF440-201ENST00000304060 RARSP54136 660 aaKnown RBP6.87□□□□□ -1.31
ZNF440-201ENST00000304060 FAM83BQ5T0W9 1011 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 SLFN13Q68D06 897 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 RCSD1Q6JBY9 416 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 KCNV1Q6PIU1 500 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 MCF2L2Q86YR7 1114 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 RPAP2Q8IXW5 612 aaPredicted RBP6.87□□□□□ -1.31
ZNF440-201ENST00000304060 PBXIP1Q96AQ6 731 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 HOMER2Q9NSB8 354 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 PTPDC1A2A3K4 754 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 SELPP16109 830 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 POU3F3P20264 500 aaPredicted RBP6.87□□□□□ -1.31
ZNF440-201ENST00000304060 ZAP70P43403 619 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 STAT2P52630 851 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 ZNF792Q3KQV3 632 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 HINFPQ9BQA5 517 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 UPF3AQ9H1J1 476 aaKnown RBP6.87□□□□□ -1.31
ZNF440-201ENST00000304060 NSUN3Q9H649 340 aaKnown RBP6.87□□□□□ -1.31
ZNF440-201ENST00000304060 PUF60Q9UHX1 559 aaKnown RBP6.87□□□□□ -1.31
ZNF440-201ENST00000304060 CCPG1Q9ULG6 757 aa6.87□□□□□ -1.31
ZNF440-201ENST00000304060 DOCK1Q14185 1865 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 VWA5AO00534 786 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 RB1P06400 928 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 RFX5P48382 616 aaPredicted RBP6.86□□□□□ -1.31
ZNF440-201ENST00000304060 SPOUT1Q5T280 376 aaKnown RBP6.86□□□□□ -1.31
ZNF440-201ENST00000304060 NFRKBQ6P4R8 1299 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 MAMDC4Q6UXC1 1216 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 ITPRIPQ8IWB1 547 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 KIF1BPQ96EK5 621 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 NOC4LQ9BVI4 516 aaKnown RBP6.86□□□□□ -1.31
ZNF440-201ENST00000304060 MAF1Q9H063 256 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 NOB1Q9ULX3 412 aaKnown RBP6.86□□□□□ -1.31
ZNF440-201ENST00000304060 RAB11FIP3O75154 756 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 STAG3L1P0CL83 205 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 NDUFV1P49821 464 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 DYNLL1P63167 89 aaKnown RBP6.86□□□□□ -1.31
ZNF440-201ENST00000304060 FIBCD1Q8N539 461 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 USP38Q8NB14 1042 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 MICAL1Q8TDZ2 1067 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 CDCA7LQ96GN5 454 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 CERS4Q9HA82 394 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.86□□□□□ -1.31
ZNF440-201ENST00000304060 LRFN2Q9ULH4 789 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 GH1P01241 217 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 EEF2P13639 858 aaKnown RBP6.86□□□□□ -1.31
ZNF440-201ENST00000304060 GPM6BQ13491 265 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 MTX1Q13505 466 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 ERMP1Q7Z2K6 904 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 FAM126BQ8IXS8 530 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 KLHDC9Q8NEP7 349 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 CLDND1Q9NY35 253 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 FLRT1Q9NZU1 646 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 CLIP2Q9UDT6 1046 aa6.86□□□□□ -1.31
ZNF440-201ENST00000304060 OTOFQ9HC10 1997 aa6.85□□□□□ -1.31
ZNF440-201ENST00000304060 GRXCR1A8MXD5 290 aa6.85□□□□□ -1.31
ZNF440-201ENST00000304060 PI4K2BG5E9Z4 385 aa6.85□□□□□ -1.31
ZNF440-201ENST00000304060 NCLP19338 710 aaKnown RBP6.85□□□□□ -1.31
ZNF440-201ENST00000304060 TRPV1Q8NER1 839 aa6.85□□□□□ -1.31
ZNF440-201ENST00000304060 CLUAP1Q96AJ1 413 aa6.85□□□□□ -1.31
ZNF440-201ENST00000304060 DBNDD2Q9BQY9 259 aa6.85□□□□□ -1.31
ZNF440-201ENST00000304060 EPHX3Q9H6B9 360 aa6.85□□□□□ -1.31
ZNF440-201ENST00000304060 NAP1L2Q9ULW6 460 aaPredicted RBP6.85□□□□□ -1.31
ZNF440-201ENST00000304060 DOCK2Q92608 1830 aa6.85□□□□□ -1.31
ZNF440-201ENST00000304060 GFRA3O60609 400 aa6.85□□□□□ -1.31
ZNF440-201ENST00000304060 ADAMTS4O75173 837 aa6.85□□□□□ -1.31
ZNF440-201ENST00000304060 TTLL1O95922 423 aa6.85□□□□□ -1.31
ZNF440-201ENST00000304060 CDK8P49336 464 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms