RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 NFE2L3Q9Y4A8 694 aa21.95■■□□□ 1.1
HOXC4-201ENST00000303406 TBC1D12O60347 775 aa21.94■■□□□ 1.1
HOXC4-201ENST00000303406 SLURP2P0DP57 97 aa21.94■■□□□ 1.1
HOXC4-201ENST00000303406 GCFC2P16383 781 aaKnown RBP21.94■■□□□ 1.1
HOXC4-201ENST00000303406 FXR2P51116 673 aaKnown RBP eCLIP21.94■■□□□ 1.1
HOXC4-201ENST00000303406 LRMPQ12912 555 aa21.94■■□□□ 1.1
HOXC4-201ENST00000303406 KCNB1Q14721 858 aa21.94■■□□□ 1.1
HOXC4-201ENST00000303406 KARSQ15046 597 aaKnown RBP21.94■■□□□ 1.1
HOXC4-201ENST00000303406 NAALADL2Q58DX5 795 aa21.94■■□□□ 1.1
HOXC4-201ENST00000303406 SPATA1Q5VX52 437 aa21.94■■□□□ 1.1
HOXC4-201ENST00000303406 BTNL9Q6UXG8 535 aa21.94■■□□□ 1.1
HOXC4-201ENST00000303406 FAM83AQ86UY5 434 aa21.94■■□□□ 1.1
HOXC4-201ENST00000303406 IGSF22Q8N9C0 903 aa21.94■■□□□ 1.1
HOXC4-201ENST00000303406 GTPBP4Q9BZE4 634 aaKnown RBP21.94■■□□□ 1.1
HOXC4-201ENST00000303406 TMEM260Q9NX78 707 aa21.94■■□□□ 1.1
HOXC4-201ENST00000303406 PPP1R3GB7ZBB8 358 aa21.93■■□□□ 1.1
HOXC4-201ENST00000303406 F5H6K3 240 aa21.93■■□□□ 1.1
HOXC4-201ENST00000303406 RAD17O75943 681 aa21.93■■□□□ 1.1
HOXC4-201ENST00000303406 KLRC3Q07444 240 aa21.93■■□□□ 1.1
HOXC4-201ENST00000303406 QRICH1Q2TAL8 776 aa21.93■■□□□ 1.1
HOXC4-201ENST00000303406 ZNF658Q5TYW1 1059 aaPredicted RBP21.93■■□□□ 1.1
HOXC4-201ENST00000303406 FILIP1Q7Z7B0 1213 aa21.93■■□□□ 1.1
HOXC4-201ENST00000303406 CABP7Q86V35 215 aa21.93■■□□□ 1.1
HOXC4-201ENST00000303406 ZBED3Q96IU2 234 aaPredicted RBP21.93■■□□□ 1.1
HOXC4-201ENST00000303406 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.93■■□□□ 1.1
HOXC4-201ENST00000303406 KCND1Q9NSA2 647 aa21.93■■□□□ 1.1
HOXC4-201ENST00000303406 KBTBD4Q9NVX7 518 aa21.93■■□□□ 1.1
HOXC4-201ENST00000303406 ATF5Q9Y2D1 282 aaPredicted RBP21.93■■□□□ 1.1
HOXC4-201ENST00000303406 CNTNAP1P78357 1384 aa21.92■■□□□ 1.1
HOXC4-201ENST00000303406 BRCA1P38398 1863 aaKnown RBP21.92■■□□□ 1.1
HOXC4-201ENST00000303406 FER1L6Q2WGJ9 1857 aa21.92■■□□□ 1.1
HOXC4-201ENST00000303406 GDF11O95390 407 aa21.92■■□□□ 1.1
HOXC4-201ENST00000303406 SLC16A2P36021 539 aa21.92■■□□□ 1.1
HOXC4-201ENST00000303406 TMC6Q7Z403 805 aa21.92■■□□□ 1.1
HOXC4-201ENST00000303406 VSTM4Q8IW00 320 aa21.92■■□□□ 1.1
HOXC4-201ENST00000303406 MED15Q96RN5 788 aa21.92■■□□□ 1.1
HOXC4-201ENST00000303406 RAB34Q9BZG1 259 aa21.92■■□□□ 1.1
HOXC4-201ENST00000303406 SYNRGQ9UMZ2 1314 aa21.92■■□□□ 1.1
HOXC4-201ENST00000303406 NDUFB10O96000 172 aa21.91■■□□□ 1.1
HOXC4-201ENST00000303406 GH2P01242 217 aa21.91■■□□□ 1.1
HOXC4-201ENST00000303406 RPN1P04843 607 aaKnown RBP21.91■■□□□ 1.1
HOXC4-201ENST00000303406 KCNJ6P48051 423 aa21.91■■□□□ 1.1
HOXC4-201ENST00000303406 PDIA5Q14554 519 aa21.91■■□□□ 1.1
HOXC4-201ENST00000303406 CDC37Q16543 378 aaPredicted RBP21.91■■□□□ 1.1
HOXC4-201ENST00000303406 CALCRLQ16602 461 aa21.91■■□□□ 1.1
HOXC4-201ENST00000303406 TMEM266Q2M3C6 531 aa21.91■■□□□ 1.1
HOXC4-201ENST00000303406 NAP1L5Q96NT1 182 aaPredicted RBP21.91■■□□□ 1.1
HOXC4-201ENST00000303406 PSTPIP2Q9H939 334 aa21.91■■□□□ 1.1
HOXC4-201ENST00000303406 SLC26A4O43511 780 aa21.9■■□□□ 1.1
HOXC4-201ENST00000303406 EDIL3O43854 480 aa21.9■■□□□ 1.1
HOXC4-201ENST00000303406 BMP3P12645 472 aa21.9■■□□□ 1.1
HOXC4-201ENST00000303406 CD44P16070 742 aaKnown RBP21.9■■□□□ 1.1
HOXC4-201ENST00000303406 POLD1P28340 1107 aa21.9■■□□□ 1.1
HOXC4-201ENST00000303406 CCZ1BP86790 482 aa21.9■■□□□ 1.1
HOXC4-201ENST00000303406 CCZ1P86791 482 aaPredicted RBP21.9■■□□□ 1.1
HOXC4-201ENST00000303406 TRAF1Q13077 416 aa21.9■■□□□ 1.1
HOXC4-201ENST00000303406 AP3B2Q13367 1082 aa21.9■■□□□ 1.1
HOXC4-201ENST00000303406 ARHGEF10LQ9HCE6 1279 aa21.9■■□□□ 1.1
HOXC4-201ENST00000303406 TCP10L2B9ZVM9 353 aa21.9■■□□□ 1.1
HOXC4-201ENST00000303406 NRDCO43847 1150 aa21.9■■□□□ 1.1
HOXC4-201ENST00000303406 CASP1P29466 404 aa21.9■■□□□ 1.1
HOXC4-201ENST00000303406 HOXA7P31268 230 aaPredicted RBP21.9■■□□□ 1.1
HOXC4-201ENST00000303406 SHROOM1Q2M3G4 852 aaPredicted RBP21.9■■□□□ 1.1
HOXC4-201ENST00000303406 DALRD3Q5D0E6 543 aaKnown RBP21.9■■□□□ 1.1
HOXC4-201ENST00000303406 SYDE2Q5VT97 1194 aa21.9■■□□□ 1.1
HOXC4-201ENST00000303406 MOXD1Q6UVY6 613 aa21.9■■□□□ 1.1
HOXC4-201ENST00000303406 PPP4R3CPQ6ZMV5 832 aa21.9■■□□□ 1.1
HOXC4-201ENST00000303406 RASSF8Q8NHQ8 419 aa21.9■■□□□ 1.1
HOXC4-201ENST00000303406 DPF2Q92785 391 aa21.9■■□□□ 1.1
HOXC4-201ENST00000303406 AMNQ9BXJ7 453 aa21.9■■□□□ 1.1
HOXC4-201ENST00000303406 RWDD2AQ9UIY3 292 aa21.9■■□□□ 1.1
HOXC4-201ENST00000303406 PP2D1A8MPX8 630 aa21.89■■□□□ 1.09
HOXC4-201ENST00000303406 TPM2P07951 284 aa21.89■■□□□ 1.09
HOXC4-201ENST00000303406 CDC25AP30304 524 aa21.89■■□□□ 1.09
HOXC4-201ENST00000303406 MAP3K10Q02779 954 aa21.89■■□□□ 1.09
HOXC4-201ENST00000303406 RRP1BQ14684 758 aaKnown RBP21.89■■□□□ 1.09
HOXC4-201ENST00000303406 CDKAL1Q5VV42 579 aa21.89■■□□□ 1.09
HOXC4-201ENST00000303406 CALML4Q96GE6 196 aa21.89■■□□□ 1.09
HOXC4-201ENST00000303406 MTFR1LQ9H019 292 aa21.89■■□□□ 1.09
HOXC4-201ENST00000303406 BLZF1Q9H2G9 400 aa21.89■■□□□ 1.09
HOXC4-201ENST00000303406 STK17AQ9UEE5 414 aa21.89■■□□□ 1.09
HOXC4-201ENST00000303406 PCDHA1Q9Y5I3 950 aa21.89■■□□□ 1.09
HOXC4-201ENST00000303406 SKILP12757 684 aa21.88■■□□□ 1.09
HOXC4-201ENST00000303406 CDK11BP21127 795 aaKnown RBP21.88■■□□□ 1.09
HOXC4-201ENST00000303406 SFPQP23246 707 aaKnown RBP eCLIP21.88■■□□□ 1.09
HOXC4-201ENST00000303406 TNNI2P48788 182 aa21.88■■□□□ 1.09
HOXC4-201ENST00000303406 USP11P51784 963 aa21.88■■□□□ 1.09
HOXC4-201ENST00000303406 JAG1P78504 1218 aa21.88■■□□□ 1.09
HOXC4-201ENST00000303406 AMPD3Q01432 767 aa21.88■■□□□ 1.09
HOXC4-201ENST00000303406 CIAPIN1Q6FI81 312 aa21.88■■□□□ 1.09
HOXC4-201ENST00000303406 TRMT44Q8IYL2 757 aaKnown RBP21.88■■□□□ 1.09
HOXC4-201ENST00000303406 C17orf53Q8N3J3 647 aaPredicted RBP21.88■■□□□ 1.09
HOXC4-201ENST00000303406 CTAGE1Q96RT6 745 aa21.88■■□□□ 1.09
HOXC4-201ENST00000303406 C7orf25Q9BPX7 421 aa21.88■■□□□ 1.09
HOXC4-201ENST00000303406 TMX2Q9Y320 296 aa21.88■■□□□ 1.09
HOXC4-201ENST00000303406 CLRN2A0PK11 232 aa21.87■■□□□ 1.09
HOXC4-201ENST00000303406 RHOBTB3O94955 611 aa21.87■■□□□ 1.09
HOXC4-201ENST00000303406 PLCG1P19174 1290 aa21.87■■□□□ 1.09
HOXC4-201ENST00000303406 PPP1R2P41236 205 aa21.87■■□□□ 1.09
HOXC4-201ENST00000303406 TECP42680 631 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms