RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 ADKP55263 362 aaKnown RBP11.32□□□□□ -0.6
CLIP1-201ENST00000302528 MYRIPQ8NFW9 859 aa11.32□□□□□ -0.6
CLIP1-201ENST00000302528 GOLGA5Q8TBA6 731 aa11.32□□□□□ -0.6
CLIP1-201ENST00000302528 BICC1Q9H694 974 aaKnown RBP11.32□□□□□ -0.6
CLIP1-201ENST00000302528 DLATP10515 647 aaKnown RBP11.31□□□□□ -0.6
CLIP1-201ENST00000302528 IL2RBP14784 551 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 PCDHB15Q9Y5E8 787 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 H0YCG3 227 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 SGK1O00141 431 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 PDE6BP35913 854 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 NSFP46459 744 aaKnown RBP11.31□□□□□ -0.6
CLIP1-201ENST00000302528 KPNA2P52292 529 aaKnown RBP11.31□□□□□ -0.6
CLIP1-201ENST00000302528 TMEM259Q4ZIN3 620 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 GLE1Q53GS7 698 aaKnown RBP11.31□□□□□ -0.6
CLIP1-201ENST00000302528 XKR9Q5GH70 373 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 ATG16L1Q676U5 607 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 ANGPTL8Q6UXH0 198 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 NFATC2IPQ8NCF5 419 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 OR8K1Q8NGG5 319 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 RPS6KC1Q96S38 1066 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 FAM95CA0A1B0GW59 222 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 OCM2P0CE71 109 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 OCMP0CE72 109 aaPredicted RBP11.31□□□□□ -0.6
CLIP1-201ENST00000302528 ACTN1P12814 892 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 IFNAR2P48551 515 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 PPM1KQ8N3J5 372 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 GDAP1Q8TB36 358 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 INTS9Q9NV88 658 aaKnown RBP11.31□□□□□ -0.6
CLIP1-201ENST00000302528 FNDC3AQ9Y2H6 1198 aaKnown RBP11.31□□□□□ -0.6
CLIP1-201ENST00000302528 ADGRF5Q8IZF2 1346 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 E9PMD0 336 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 SORBS3O60504 671 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 THOC5Q13769 683 aaKnown RBP11.31□□□□□ -0.6
CLIP1-201ENST00000302528 KRT33BQ14525 404 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 CCDC197Q8NCU1 140 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 GIPC2Q8TF65 315 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 PAWRQ96IZ0 340 aaKnown RBP11.31□□□□□ -0.6
CLIP1-201ENST00000302528 MYL10Q9BUA6 226 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 SUGCTQ9HAC7 445 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 DISC1Q9NRI5 854 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 TMEM247A6NEH6 219 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 UBAP1LF5GYI3 381 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 SLC27A2O14975 620 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 TLR3O15455 904 aaKnown RBP11.31□□□□□ -0.6
CLIP1-201ENST00000302528 PPP2R5BQ15173 497 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 ARMCX3Q9UH62 379 aaPredicted RBP11.31□□□□□ -0.6
CLIP1-201ENST00000302528 TLK1Q9UKI8 766 aa11.31□□□□□ -0.6
CLIP1-201ENST00000302528 KCNJ18B7U540 433 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 TTI1O43156 1089 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 CPP00450 1065 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 LMNB2Q03252 620 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 KCNJ12Q14500 433 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 CEP85Q6P2H3 762 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 DPP8Q6V1X1 898 aaPredicted RBP11.3□□□□□ -0.6
CLIP1-201ENST00000302528 ABI1Q8IZP0 508 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 C8orf58Q8NAV2 365 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 STK32BQ9NY57 414 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 KCNJ14Q9UNX9 436 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 H3BRJ5 948 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 MAN1A2O60476 641 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 TRIM37O94972 964 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 FLOT2Q14254 428 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 KRT40Q6A162 431 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 TRIM59Q8IWR1 403 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 DNAAF3Q8N9W5 541 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 PHKBQ93100 1093 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 USP26Q9BXU7 913 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 CPSF3Q9UKF6 684 aaKnown RBP11.3□□□□□ -0.6
CLIP1-201ENST00000302528 PTPN22Q9Y2R2 807 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 MAGI3Q5TCQ9 1506 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 KDM2BQ8NHM5 1336 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 MSH6P52701 1360 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 TOM1O60784 492 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 ITGA6P23229 1130 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 ART3Q13508 389 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 RUNDC3BQ96NL0 473 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 SCOCQ9UIL1 159 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 MAGED2Q9UNF1 606 aaPredicted RBP11.3□□□□□ -0.6
CLIP1-201ENST00000302528 KIAA0556O60303 1618 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 SOS1Q07889 1333 aaPredicted RBP11.3□□□□□ -0.6
CLIP1-201ENST00000302528 GPAA1O43292 621 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 TCP1P17987 556 aaKnown RBP11.3□□□□□ -0.6
CLIP1-201ENST00000302528 HLA-DPA1P20036 260 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 CTDSPL2Q05D32 466 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 NUDCD1Q96RS6 583 aa11.3□□□□□ -0.6
CLIP1-201ENST00000302528 PIK3CAP42336 1068 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 EAPPQ56P03 285 aaPredicted RBP11.29□□□□□ -0.6
CLIP1-201ENST00000302528 NAA35Q5VZE5 725 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 SPOPLQ6IQ16 392 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 CCNYQ8ND76 341 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 APPBP2Q92624 585 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 CAPN11Q9UMQ6 739 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 CSADQ9Y600 493 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 ANKRD36BQ8N2N9 1353 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 PLCH2O75038 1416 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 EIF3CLB5ME19 914 aaKnown RBP11.29□□□□□ -0.6
CLIP1-201ENST00000302528 H2AFZP0C0S5 128 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 TMOD1P28289 359 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 ARMCX5Q6P1M9 558 aa11.29□□□□□ -0.6
CLIP1-201ENST00000302528 H2AFVQ71UI9 128 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms