RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 F8W031 263 aaPredicted RBP8.34□□□□□ -1.07
SF3B3-201ENST00000302516 MAP3K7O43318 606 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 TRMT44Q8IYL2 757 aaKnown RBP8.34□□□□□ -1.07
SF3B3-201ENST00000302516 ANKRD35Q8N283 1001 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 CFAP61Q8NHU2 1237 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 GGA1Q9UJY5 639 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.34□□□□□ -1.07
SF3B3-201ENST00000302516 CCT5P48643 541 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 PAXIP1Q6ZW49 1069 aaPredicted RBP8.34□□□□□ -1.07
SF3B3-201ENST00000302516 PSMB7Q99436 277 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 BPIFA3Q9BQP9 254 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 TRIM15Q9C019 465 aa8.34□□□□□ -1.07
SF3B3-201ENST00000302516 PSMD6Q15008 389 aa8.34□□□□□ -1.08
SF3B3-201ENST00000302516 CARD14Q9BXL6 1004 aa8.34□□□□□ -1.08
SF3B3-201ENST00000302516 SERTAD1Q9UHV2 236 aa8.34□□□□□ -1.08
SF3B3-201ENST00000302516 RNF8O76064 485 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 SESN3P58005 492 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 GUCY2DQ02846 1103 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 JDP2Q8WYK2 163 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 SERPINI1Q99574 410 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 TRIM56Q9BRZ2 755 aaKnown RBP8.33□□□□□ -1.08
SF3B3-201ENST00000302516 USTQ9Y2C2 406 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 MYCNP04198 464 aaPredicted RBP8.33□□□□□ -1.08
SF3B3-201ENST00000302516 MRRFQ96E11 262 aaKnown RBP8.33□□□□□ -1.08
SF3B3-201ENST00000302516 STAP2Q9UGK3 403 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 CD2APQ9Y5K6 639 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 VIRMAQ69YN4 1812 aaKnown RBP8.33□□□□□ -1.08
SF3B3-201ENST00000302516 ADCY2Q08462 1091 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 OSBPL3Q9H4L5 887 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 JAK2O60674 1132 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 SCG2P13521 617 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 RIOK1Q9BRS2 568 aaKnown RBP8.33□□□□□ -1.08
SF3B3-201ENST00000302516 THAP9Q9H5L6 903 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 ZFYVE16Q7Z3T8 1539 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 MAP3K4Q9Y6R4 1608 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 SEMA3EO15041 775 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 DCTN3O75935 186 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 NEK8Q86SG6 692 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 CTAGE3PQ8IX95 158 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 DBNDD2Q9BQY9 259 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 BLZF1Q9H2G9 400 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 DDX25Q9UHL0 483 aaKnown RBP8.33□□□□□ -1.08
SF3B3-201ENST00000302516 CAMSAP1Q5T5Y3 1602 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 NSFP46459 744 aaKnown RBP8.33□□□□□ -1.08
SF3B3-201ENST00000302516 PRPSAP1Q14558 356 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 KRT39Q6A163 491 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 KIF20BQ96Q89 1820 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 WDR46O15213 610 aaKnown RBP8.33□□□□□ -1.08
SF3B3-201ENST00000302516 ADAMTS2O95450 1211 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 INHBAP08476 426 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 H2AFZP0C0S5 128 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 IFT88Q13099 833 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 H2AFVQ71UI9 128 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 MAP7D3Q8IWC1 876 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 AFG3L2Q9Y4W6 797 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 SPATA31E1Q6ZUB1 1445 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 UFL1O94874 794 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 TNNI1P19237 187 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 NDUFA8P51970 172 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 CDC37Q16543 378 aaPredicted RBP8.33□□□□□ -1.08
SF3B3-201ENST00000302516 MMEL1Q495T6 779 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 PPP4R3CPQ6ZMV5 832 aa8.33□□□□□ -1.08
SF3B3-201ENST00000302516 RAB44Q7Z6P3 723 aaPredicted RBP8.33□□□□□ -1.08
SF3B3-201ENST00000302516 MAP3K19Q56UN5 1328 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 CIAO1O76071 339 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 RASIP1Q5U651 963 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 NEURL1BA8MQ27 555 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 KIF1CO43896 1103 aaKnown RBP8.32□□□□□ -1.08
SF3B3-201ENST00000302516 MAGEA9P43362 315 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 NLRX1Q86UT6 975 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 VPS54Q9P1Q0 977 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 MID2Q9UJV3 735 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 ATP10AO60312 1499 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 SMCO2A6NFE2 343 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 ZBED4O75132 1171 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 ALCAMQ13740 583 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 SLC39A14Q15043 492 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 EXOC3L4Q17RC7 722 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 MMS22LQ6ZRQ5 1243 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 FANCLQ9NW38 375 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 PACSIN2Q9UNF0 486 aaPredicted RBP8.32□□□□□ -1.08
SF3B3-201ENST00000302516 MYL7Q01449 175 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 CTDSPL2Q05D32 466 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 ST13P4Q8IZP2 240 aaPredicted RBP8.32□□□□□ -1.08
SF3B3-201ENST00000302516 KIFC3Q9BVG8 833 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 FAM96AQ9H5X1 160 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 TBC1D7Q9P0N9 293 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 FAM8A1Q9UBU6 413 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 SAP30BPQ9UHR5 308 aaKnown RBP8.32□□□□□ -1.08
SF3B3-201ENST00000302516 TNNQ9UQP3 1299 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 PTCH1Q13635 1447 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 YEATS2Q9ULM3 1422 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 AATKQ6ZMQ8 1374 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 ECEL1O95672 775 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 TNNC2P02585 160 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 S100BP04271 92 aaPredicted RBP8.32□□□□□ -1.08
SF3B3-201ENST00000302516 CA8P35219 290 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 AATFQ9NY61 560 aaKnown RBP eCLIP8.32□□□□□ -1.084e-38■■■■■ 46.6
SF3B3-201ENST00000302516 PNMA6EA0A0J9YXQ4 647 aa8.32□□□□□ -1.08
SF3B3-201ENST00000302516 INPP1P49441 399 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms