RNA–Protein interactions for RNA: ENST00000301821.10

RPSA-201, Transcript of ribosomal protein SA, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPSA, Length 1,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-201ENST00000301821 SLC38A10Q9HBR0 1119 aa12.2□□□□□ -0.46
RPSA-201ENST00000301821 CLIP2Q9UDT6 1046 aa12.2□□□□□ -0.46
RPSA-201ENST00000301821 HCN4Q9Y3Q4 1203 aa12.2□□□□□ -0.46
RPSA-201ENST00000301821 PCDHA11Q9Y5I1 949 aa12.2□□□□□ -0.46
RPSA-201ENST00000301821 GTPBP6O43824 516 aaPredicted RBP12.19□□□□□ -0.46
RPSA-201ENST00000301821 CABYRO75952 493 aa12.19□□□□□ -0.46
RPSA-201ENST00000301821 ATP2A2P16615 1042 aaKnown RBP12.19□□□□□ -0.46
RPSA-201ENST00000301821 NKX3-2P78367 333 aa12.19□□□□□ -0.46
RPSA-201ENST00000301821 UBE3CQ15386 1083 aa12.19□□□□□ -0.46
RPSA-201ENST00000301821 FSCN1Q16658 493 aaKnown RBP12.19□□□□□ -0.46
RPSA-201ENST00000301821 TSHZ3Q63HK5 1081 aa12.19□□□□□ -0.46
RPSA-201ENST00000301821 RPUSD2Q8IZ73 545 aaKnown RBP12.19□□□□□ -0.46
RPSA-201ENST00000301821 LRRC47Q8N1G4 583 aaKnown RBP12.19□□□□□ -0.46
RPSA-201ENST00000301821 SLC43A3Q8NBI5 491 aa12.19□□□□□ -0.46
RPSA-201ENST00000301821 PUS7LQ9H0K6 701 aaKnown RBP12.19□□□□□ -0.46
RPSA-201ENST00000301821 AP5M1Q9H0R1 490 aa12.19□□□□□ -0.46
RPSA-201ENST00000301821 EPHX3Q9H6B9 360 aa12.19□□□□□ -0.46
RPSA-201ENST00000301821 ACAD9Q9H845 621 aa12.19□□□□□ -0.46
RPSA-201ENST00000301821 GNEQ9Y223 722 aaKnown RBP12.19□□□□□ -0.46
RPSA-201ENST00000301821 DDX49Q9Y6V7 483 aaKnown RBP12.19□□□□□ -0.46
RPSA-201ENST00000301821 MYO9BQ13459 2157 aa12.19□□□□□ -0.46
RPSA-201ENST00000301821 GRIN2DO15399 1336 aa12.18□□□□□ -0.46
RPSA-201ENST00000301821 MINDY4BA8MYZ0 360 aa12.18□□□□□ -0.46
RPSA-201ENST00000301821 ERC2O15083 957 aa12.18□□□□□ -0.46
RPSA-201ENST00000301821 DYNC1LI2O43237 492 aaPredicted RBP12.18□□□□□ -0.46
RPSA-201ENST00000301821 ZEB2O60315 1214 aa12.18□□□□□ -0.46
RPSA-201ENST00000301821 CA3P07451 260 aa12.18□□□□□ -0.46
RPSA-201ENST00000301821 SMPD1P17405 629 aa12.18□□□□□ -0.46
RPSA-201ENST00000301821 ATP5JP18859 108 aa12.18□□□□□ -0.46
RPSA-201ENST00000301821 OAZ1P54368 228 aa12.18□□□□□ -0.46
RPSA-201ENST00000301821 TTLL4Q14679 1199 aa12.18□□□□□ -0.46
RPSA-201ENST00000301821 EEPD1Q7L9B9 569 aa12.18□□□□□ -0.46
RPSA-201ENST00000301821 DEFB128Q7Z7B8 93 aa12.18□□□□□ -0.46
RPSA-201ENST00000301821 FBXO16Q8IX29 292 aaPredicted RBP12.18□□□□□ -0.46
RPSA-201ENST00000301821 FAM133AQ8N9E0 248 aa12.18□□□□□ -0.46
RPSA-201ENST00000301821 HAUS7Q99871 368 aa12.18□□□□□ -0.46
RPSA-201ENST00000301821 LRFN3Q9BTN0 628 aa12.18□□□□□ -0.46
RPSA-201ENST00000301821 LRRCC1Q9C099 1032 aa12.18□□□□□ -0.46
RPSA-201ENST00000301821 CHMP4BQ9H444 224 aaKnown RBP12.18□□□□□ -0.46
RPSA-201ENST00000301821 A1CFQ9NQ94 594 aaKnown RBP12.18□□□□□ -0.46
RPSA-201ENST00000301821 RNF146Q9NTX7 359 aa12.18□□□□□ -0.46
RPSA-201ENST00000301821 FEM1BQ9UK73 627 aa12.18□□□□□ -0.46
RPSA-201ENST00000301821 SOWAHBA6NEL2 793 aa12.17□□□□□ -0.46
RPSA-201ENST00000301821 PRDM1O75626 825 aa12.17□□□□□ -0.46
RPSA-201ENST00000301821 TMEM67Q5HYA8 995 aa12.17□□□□□ -0.46
RPSA-201ENST00000301821 KRT40Q6A162 431 aa12.17□□□□□ -0.46
RPSA-201ENST00000301821 ZSCAN25Q6NSZ9 544 aa12.17□□□□□ -0.46
RPSA-201ENST00000301821 CHMP4CQ96CF2 233 aa12.17□□□□□ -0.46
RPSA-201ENST00000301821 CEP95Q96GE4 821 aa12.17□□□□□ -0.46
RPSA-201ENST00000301821 AGBL1Q96MI9 1066 aa12.17□□□□□ -0.46
RPSA-201ENST00000301821 PDGFCQ9NRA1 345 aa12.17□□□□□ -0.46
RPSA-201ENST00000301821 MTCH2Q9Y6C9 303 aa12.17□□□□□ -0.46
RPSA-201ENST00000301821 IGKV6D-41A0A0C4DH26 115 aa12.16□□□□□ -0.46
RPSA-201ENST00000301821 EPOPA6NHQ4 379 aa12.16□□□□□ -0.46
RPSA-201ENST00000301821 ASB14A6NK59 587 aa12.16□□□□□ -0.46
RPSA-201ENST00000301821 TMEM232C9JQI7 657 aa12.16□□□□□ -0.46
RPSA-201ENST00000301821 CYP2C9P11712 490 aa12.16□□□□□ -0.46
RPSA-201ENST00000301821 BMP3P12645 472 aa12.16□□□□□ -0.46
RPSA-201ENST00000301821 IKQ13123 557 aaPredicted RBP12.16□□□□□ -0.46
RPSA-201ENST00000301821 SBK1Q52WX2 424 aa12.16□□□□□ -0.46
RPSA-201ENST00000301821 TMEM31Q5JXX7 168 aa12.16□□□□□ -0.46
RPSA-201ENST00000301821 TMEM63BQ5T3F8 832 aa12.16□□□□□ -0.46
RPSA-201ENST00000301821 SLFN13Q68D06 897 aa12.16□□□□□ -0.46
RPSA-201ENST00000301821 ARNTL2Q8WYA1 636 aa12.16□□□□□ -0.46
RPSA-201ENST00000301821 VWCEQ96DN2 955 aa12.16□□□□□ -0.46
RPSA-201ENST00000301821 ALDH8A1Q9H2A2 487 aaPredicted RBP12.16□□□□□ -0.46
RPSA-201ENST00000301821 TRMT13Q9NUP7 481 aaKnown RBP12.16□□□□□ -0.46
RPSA-201ENST00000301821 COL4A4P53420 1690 aaPredicted RBP12.16□□□□□ -0.46
RPSA-201ENST00000301821 SCN5AQ14524 2016 aa12.15□□□□□ -0.46
RPSA-201ENST00000301821 FAM86C2PA6NEL3 165 aa12.15□□□□□ -0.46
RPSA-201ENST00000301821 GSG1L2A8MUP6 293 aa12.15□□□□□ -0.46
RPSA-201ENST00000301821 TTLL1O95922 423 aa12.15□□□□□ -0.46
RPSA-201ENST00000301821 PFKMP08237 780 aa12.15□□□□□ -0.46
RPSA-201ENST00000301821 ALAS1P13196 640 aa12.15□□□□□ -0.46
RPSA-201ENST00000301821 FXR2P51116 673 aaKnown RBP eCLIP12.15□□□□□ -0.46
RPSA-201ENST00000301821 STAT2P52630 851 aa12.15□□□□□ -0.46
RPSA-201ENST00000301821 ZNF444Q8N0Y2 327 aaPredicted RBP12.15□□□□□ -0.46
RPSA-201ENST00000301821 GMCL1P1Q8NEA9 526 aa12.15□□□□□ -0.46
RPSA-201ENST00000301821 STRBPQ96SI9 672 aaKnown RBP12.15□□□□□ -0.46
RPSA-201ENST00000301821 SEZ6LQ9BYH1 1024 aa12.15□□□□□ -0.46
RPSA-201ENST00000301821 MTMR4Q9NYA4 1195 aa12.15□□□□□ -0.46
RPSA-201ENST00000301821 TANC1Q9C0D5 1861 aa12.14□□□□□ -0.47
RPSA-201ENST00000301821 TNKSO95271 1327 aa12.14□□□□□ -0.47
RPSA-201ENST00000301821 ARHGEF15O94989 841 aa12.14□□□□□ -0.47
RPSA-201ENST00000301821 ACTN1P12814 892 aa12.14□□□□□ -0.47
RPSA-201ENST00000301821 TDO2P48775 406 aa12.14□□□□□ -0.47
RPSA-201ENST00000301821 SNAP25P60880 206 aa12.14□□□□□ -0.47
RPSA-201ENST00000301821 FAM47CQ5HY64 1035 aa12.14□□□□□ -0.47
RPSA-201ENST00000301821 TAPT1Q6NXT6 567 aa12.14□□□□□ -0.47
RPSA-201ENST00000301821 KIAA1211Q6ZU35 1233 aa12.14□□□□□ -0.47
RPSA-201ENST00000301821 TRERF1Q96PN7 1200 aa12.14□□□□□ -0.47
RPSA-201ENST00000301821 SLC9A7Q96T83 725 aa12.14□□□□□ -0.47
RPSA-201ENST00000301821 EPB41L4AQ9HCS5 686 aaPredicted RBP12.14□□□□□ -0.47
RPSA-201ENST00000301821 COG5Q9UP83 839 aa12.14□□□□□ -0.47
RPSA-201ENST00000301821 PCDHB15Q9Y5E8 787 aa12.14□□□□□ -0.47
RPSA-201ENST00000301821 MUC3AQ02505 3323 aa12.14□□□□□ -0.47
RPSA-201ENST00000301821 ZNF536O15090 1300 aa12.13□□□□□ -0.47
RPSA-201ENST00000301821 LCTP09848 1927 aa12.13□□□□□ -0.47
RPSA-201ENST00000301821 TLL1O43897 1013 aa12.13□□□□□ -0.47
RPSA-201ENST00000301821 MYL3P08590 195 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms