RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 USP17L22D6RA61 530 aa17.52■□□□□ 0.39
CHAF1A-201ENST00000301280 USP17L17D6RBQ6 530 aa17.52■□□□□ 0.39
CHAF1A-201ENST00000301280 USP17L19D6RCP7 530 aa17.52■□□□□ 0.39
CHAF1A-201ENST00000301280 USP17L20D6RJB6 530 aa17.52■□□□□ 0.39
CHAF1A-201ENST00000301280 KIF5CO60282 957 aa17.52■□□□□ 0.39
CHAF1A-201ENST00000301280 DDAH1O94760 285 aa17.52■□□□□ 0.39
CHAF1A-201ENST00000301280 PCP11498 1178 aaKnown RBP17.52■□□□□ 0.39
CHAF1A-201ENST00000301280 CALML3P27482 149 aa17.52■□□□□ 0.39
CHAF1A-201ENST00000301280 USP17L24Q0WX57 530 aa17.52■□□□□ 0.39
CHAF1A-201ENST00000301280 SLC35G1Q2M3R5 365 aa17.52■□□□□ 0.39
CHAF1A-201ENST00000301280 SLC10A5Q5PT55 438 aa17.52■□□□□ 0.39
CHAF1A-201ENST00000301280 USP17L6PQ6QN14 398 aa17.52■□□□□ 0.39
CHAF1A-201ENST00000301280 KIAA1328Q86T90 577 aa17.52■□□□□ 0.39
CHAF1A-201ENST00000301280 FERMT2Q96AC1 680 aa17.52■□□□□ 0.39
CHAF1A-201ENST00000301280 ERO1AQ96HE7 468 aa17.52■□□□□ 0.39
CHAF1A-201ENST00000301280 EXOC1Q9NV70 894 aa17.52■□□□□ 0.39
CHAF1A-201ENST00000301280 PCDHA4Q9UN74 947 aa17.52■□□□□ 0.39
CHAF1A-201ENST00000301280 TM4SF1P30408 202 aa17.51■□□□□ 0.39
CHAF1A-201ENST00000301280 TBC1D10BQ4KMP7 808 aaPredicted RBP17.51■□□□□ 0.39
CHAF1A-201ENST00000301280 TMCO3Q6UWJ1 677 aa17.51■□□□□ 0.39
CHAF1A-201ENST00000301280 NKRFO15226 690 aaKnown RBP eCLIP17.51■□□□□ 0.39
CHAF1A-201ENST00000301280 SRGAP2O75044 1071 aa17.51■□□□□ 0.39
CHAF1A-201ENST00000301280 PPP2R3AQ06190 1150 aa17.51■□□□□ 0.39
CHAF1A-201ENST00000301280 GABPB1Q06547 395 aaPredicted RBP17.51■□□□□ 0.39
CHAF1A-201ENST00000301280 NPY5RQ15761 445 aa17.51■□□□□ 0.39
CHAF1A-201ENST00000301280 FCHSD1Q86WN1 690 aa17.51■□□□□ 0.39
CHAF1A-201ENST00000301280 QTRT2Q9H974 415 aaKnown RBP17.51■□□□□ 0.39
CHAF1A-201ENST00000301280 PCDHA6Q9UN73 950 aa17.51■□□□□ 0.39
CHAF1A-201ENST00000301280 PCDHA8Q9Y5H6 950 aa17.51■□□□□ 0.39
CHAF1A-201ENST00000301280 PSDA5PKW4 1024 aaPredicted RBP17.5■□□□□ 0.39
CHAF1A-201ENST00000301280 NFIAQ12857 509 aa17.5■□□□□ 0.39
CHAF1A-201ENST00000301280 CCDC93Q567U6 631 aa17.5■□□□□ 0.39
CHAF1A-201ENST00000301280 MAD2L2Q9UI95 211 aa17.5■□□□□ 0.39
CHAF1A-201ENST00000301280 BMP2KQ9NSY1 1161 aaPredicted RBP17.5■□□□□ 0.39
CHAF1A-201ENST00000301280 HDAC6Q9UBN7 1215 aa17.5■□□□□ 0.39
CHAF1A-201ENST00000301280 AFF2P51816 1311 aa17.5■□□□□ 0.39
CHAF1A-201ENST00000301280 PPP1R3GB7ZBB8 358 aa17.5■□□□□ 0.39
CHAF1A-201ENST00000301280 ATP2C1P98194 919 aaPredicted RBP17.5■□□□□ 0.39
CHAF1A-201ENST00000301280 TBC1D8BQ0IIM8 1120 aa17.5■□□□□ 0.39
CHAF1A-201ENST00000301280 REXO1L1PQ8IX06 675 aa17.5■□□□□ 0.39
CHAF1A-201ENST00000301280 ZFPM1Q8IX07 1006 aa17.5■□□□□ 0.39
CHAF1A-201ENST00000301280 SLC35F6Q8N357 371 aa17.5■□□□□ 0.39
CHAF1A-201ENST00000301280 CCDC155Q8N6L0 562 aa17.5■□□□□ 0.39
CHAF1A-201ENST00000301280 CAGE1Q8TC20 777 aa17.5■□□□□ 0.39
CHAF1A-201ENST00000301280 MEIS1O00470 390 aa17.49■□□□□ 0.39
CHAF1A-201ENST00000301280 CLCN6P51797 869 aa17.49■□□□□ 0.39
CHAF1A-201ENST00000301280 STIM1Q13586 685 aa17.49■□□□□ 0.39
CHAF1A-201ENST00000301280 NONOQ15233 471 aaKnown RBP eCLIP17.49■□□□□ 0.39
CHAF1A-201ENST00000301280 KRT222Q8N1A0 295 aa17.49■□□□□ 0.39
CHAF1A-201ENST00000301280 REXO1Q8N1G1 1221 aaKnown RBP17.49■□□□□ 0.39
CHAF1A-201ENST00000301280 C6orf50Q9HD87 102 aa17.49■□□□□ 0.39
CHAF1A-201ENST00000301280 NLRC4Q9NPP4 1024 aa17.49■□□□□ 0.39
CHAF1A-201ENST00000301280 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.49■□□□□ 0.39
CHAF1A-201ENST00000301280 TUBB4AP04350 444 aa17.49■□□□□ 0.39
CHAF1A-201ENST00000301280 COPB1P53618 953 aaKnown RBP17.49■□□□□ 0.39
CHAF1A-201ENST00000301280 GSTO1P78417 241 aa17.49■□□□□ 0.39
CHAF1A-201ENST00000301280 L2HGDHQ9H9P8 463 aa17.49■□□□□ 0.39
CHAF1A-201ENST00000301280 SUGCTQ9HAC7 445 aa17.49■□□□□ 0.39
CHAF1A-201ENST00000301280 LRWD1Q9UFC0 647 aa17.49■□□□□ 0.39
CHAF1A-201ENST00000301280 STK4Q13043 487 aa17.49■□□□□ 0.39
CHAF1A-201ENST00000301280 GLIS3Q8NEA6 775 aa17.49■□□□□ 0.39
CHAF1A-201ENST00000301280 DEF6Q9H4E7 631 aa17.49■□□□□ 0.39
CHAF1A-201ENST00000301280 CYP4A11Q02928 519 aa17.48■□□□□ 0.39
CHAF1A-201ENST00000301280 CT47A1Q5JQC4 288 aaPredicted RBP17.48■□□□□ 0.39
CHAF1A-201ENST00000301280 NCAPH2Q6IBW4 605 aa17.48■□□□□ 0.39
CHAF1A-201ENST00000301280 CCDC84Q86UT8 332 aaPredicted RBP17.48■□□□□ 0.39
CHAF1A-201ENST00000301280 TNFRSF25Q93038 417 aa17.48■□□□□ 0.39
CHAF1A-201ENST00000301280 FHOD1Q9Y613 1164 aa17.48■□□□□ 0.39
CHAF1A-201ENST00000301280 LRRC37AA6NMS7 1700 aa17.48■□□□□ 0.39
CHAF1A-201ENST00000301280 LTBP1Q14766 1721 aa17.48■□□□□ 0.39
CHAF1A-201ENST00000301280 CNTNAP4Q9C0A0 1308 aa17.48■□□□□ 0.39
CHAF1A-201ENST00000301280 PSMA7O14818 248 aa17.48■□□□□ 0.39
CHAF1A-201ENST00000301280 CHMP2AO43633 222 aa17.48■□□□□ 0.39
CHAF1A-201ENST00000301280 H2AFXP16104 143 aaPredicted RBP17.48■□□□□ 0.39
CHAF1A-201ENST00000301280 PLS1Q14651 629 aa17.48■□□□□ 0.39
CHAF1A-201ENST00000301280 TBC1D16Q8TBP0 767 aa17.48■□□□□ 0.39
CHAF1A-201ENST00000301280 SNX29Q8TEQ0 813 aa17.48■□□□□ 0.39
CHAF1A-201ENST00000301280 DISC1Q9NRI5 854 aa17.48■□□□□ 0.39
CHAF1A-201ENST00000301280 FLT1P17948 1338 aa17.48■□□□□ 0.39
CHAF1A-201ENST00000301280 SEMA3EO15041 775 aa17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 CLSTN1O94985 981 aa17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 IPO7O95373 1038 aaKnown RBP17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 TBX2Q13207 712 aaPredicted RBP17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 KRT26Q7Z3Y9 468 aa17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 RBM17Q96I25 401 aaKnown RBP17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 CLRN2A0PK11 232 aa17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 USP17L10C9JJH3 530 aa17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 KIF2AO00139 706 aaPredicted RBP17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 GYPCP04921 128 aa17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 GYS1P13807 737 aa17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 ZNF18P17022 549 aa17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 MAEAQ7L5Y9 396 aa17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 DNAAF5Q86Y56 855 aa17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 FNBP4Q8N3X1 1017 aaPredicted RBP17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 SMCR8Q8TEV9 937 aaPredicted RBP17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 GJD4Q96KN9 370 aaPredicted RBP17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 GSDMAQ96QA5 445 aa17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 DDX4Q9NQI0 724 aaKnown RBP17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 AGPAT5Q9NUQ2 364 aa17.47■□□□□ 0.39
CHAF1A-201ENST00000301280 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms