RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 LINS1Q8NG48 757 aa15.99■□□□□ 0.15
CDT1-201ENST00000301019 TATDN2Q93075 761 aa15.99■□□□□ 0.15
CDT1-201ENST00000301019 ZNF570Q96NI8 536 aa15.99■□□□□ 0.15
CDT1-201ENST00000301019 CTAGE1Q96RT6 745 aa15.99■□□□□ 0.15
CDT1-201ENST00000301019 ATP6V0A4Q9HBG4 840 aa15.99■□□□□ 0.15
CDT1-201ENST00000301019 FAM207AQ9NSI2 230 aaPredicted RBP15.99■□□□□ 0.15
CDT1-201ENST00000301019 CNOT8Q9UFF9 292 aaKnown RBP15.99■□□□□ 0.15
CDT1-201ENST00000301019 BAZ2BQ9UIF8 2168 aaKnown RBP15.99■□□□□ 0.15
CDT1-201ENST00000301019 LTBP4Q8N2S1 1624 aa15.98■□□□□ 0.15
CDT1-201ENST00000301019 SMIM24O75264 130 aa15.98■□□□□ 0.15
CDT1-201ENST00000301019 PAFAH1B1P43034 410 aa15.98■□□□□ 0.15
CDT1-201ENST00000301019 PMS1P54277 932 aaKnown RBP15.98■□□□□ 0.15
CDT1-201ENST00000301019 NEXNQ0ZGT2 675 aa15.98■□□□□ 0.15
CDT1-201ENST00000301019 PAPD7Q5XG87 772 aaKnown RBP15.98■□□□□ 0.15
CDT1-201ENST00000301019 ZBTB43O43298 467 aa15.98■□□□□ 0.15
CDT1-201ENST00000301019 SNUPNO95149 360 aaKnown RBP15.98■□□□□ 0.15
CDT1-201ENST00000301019 KCNJ2P63252 427 aa15.98■□□□□ 0.15
CDT1-201ENST00000301019 SKOR1P84550 965 aa15.98■□□□□ 0.15
CDT1-201ENST00000301019 CUL5Q93034 780 aa15.98■□□□□ 0.15
CDT1-201ENST00000301019 CCDC42Q96M95 316 aa15.98■□□□□ 0.15
CDT1-201ENST00000301019 OSBPL9Q96SU4 736 aa15.98■□□□□ 0.15
CDT1-201ENST00000301019 SELENOSQ9BQE4 189 aa15.98■□□□□ 0.15
CDT1-201ENST00000301019 ABCC6O95255 1503 aa15.98■□□□□ 0.15
CDT1-201ENST00000301019 UBN2Q6ZU65 1347 aa15.98■□□□□ 0.15
CDT1-201ENST00000301019 A0A087WZG4 1122 aa15.98■□□□□ 0.15
CDT1-201ENST00000301019 EVI5O60447 810 aa15.98■□□□□ 0.15
CDT1-201ENST00000301019 SSR1P43307 286 aaKnown RBP15.98■□□□□ 0.15
CDT1-201ENST00000301019 SARSP49591 514 aaKnown RBP15.98■□□□□ 0.15
CDT1-201ENST00000301019 C2CD5Q86YS7 1000 aa15.98■□□□□ 0.15
CDT1-201ENST00000301019 CCDC63Q8NA47 563 aa15.98■□□□□ 0.15
CDT1-201ENST00000301019 ATP6V1G3Q96LB4 118 aa15.98■□□□□ 0.15
CDT1-201ENST00000301019 KIF3CO14782 793 aa15.97■□□□□ 0.15
CDT1-201ENST00000301019 SPA17Q15506 151 aa15.97■□□□□ 0.15
CDT1-201ENST00000301019 TCP11X2Q5H9J9 407 aa15.97■□□□□ 0.15
CDT1-201ENST00000301019 EARS2Q5JPH6 523 aaKnown RBP15.97■□□□□ 0.15
CDT1-201ENST00000301019 AGXT2Q9BYV1 514 aa15.97■□□□□ 0.15
CDT1-201ENST00000301019 MLXIPLQ9NP71 852 aa15.97■□□□□ 0.15
CDT1-201ENST00000301019 ZNHIT6Q9NWK9 470 aaKnown RBP15.97■□□□□ 0.15
CDT1-201ENST00000301019 MYO1AQ9UBC5 1043 aa15.97■□□□□ 0.15
CDT1-201ENST00000301019 MYH10P35580 1976 aa15.97■□□□□ 0.15
CDT1-201ENST00000301019 RNF113AO15541 343 aaKnown RBP15.97■□□□□ 0.15
CDT1-201ENST00000301019 SLC8A1P32418 973 aa15.97■□□□□ 0.15
CDT1-201ENST00000301019 MAGOHP61326 146 aaKnown RBP15.97■□□□□ 0.15
CDT1-201ENST00000301019 KDM7AQ6ZMT4 941 aa15.97■□□□□ 0.15
CDT1-201ENST00000301019 MAGOHBQ96A72 148 aaKnown RBP15.97■□□□□ 0.15
CDT1-201ENST00000301019 PUS3Q9BZE2 481 aaKnown RBP15.97■□□□□ 0.15
CDT1-201ENST00000301019 SNX12Q9UMY4 172 aa15.97■□□□□ 0.15
CDT1-201ENST00000301019 TRIM33Q9UPN9 1127 aa15.97■□□□□ 0.15
CDT1-201ENST00000301019 AXIN2Q9Y2T1 843 aa15.97■□□□□ 0.15
CDT1-201ENST00000301019 PHRF1Q9P1Y6 1649 aaKnown RBP15.97■□□□□ 0.15
CDT1-201ENST00000301019 ZNF263O14978 683 aa15.96■□□□□ 0.15
CDT1-201ENST00000301019 AKR1B10O60218 316 aa15.96■□□□□ 0.15
CDT1-201ENST00000301019 CTNNA1P35221 906 aaKnown RBP15.96■□□□□ 0.15
CDT1-201ENST00000301019 RASSF7Q02833 373 aa15.96■□□□□ 0.15
CDT1-201ENST00000301019 TMEM67Q5HYA8 995 aa15.96■□□□□ 0.15
CDT1-201ENST00000301019 ANKRD24Q8TF21 1146 aa15.96■□□□□ 0.15
CDT1-201ENST00000301019 RAPGEF5Q92565 580 aa15.96■□□□□ 0.15
CDT1-201ENST00000301019 DSCC1Q9BVC3 393 aa15.96■□□□□ 0.15
CDT1-201ENST00000301019 IFIH1Q9BYX4 1025 aaKnown RBP15.96■□□□□ 0.15
CDT1-201ENST00000301019 ABCF2Q9UG63 623 aa15.96■□□□□ 0.15
CDT1-201ENST00000301019 SALL4Q9UJQ4 1053 aa15.96■□□□□ 0.15
CDT1-201ENST00000301019 GNAT1P11488 350 aa15.96■□□□□ 0.15
CDT1-201ENST00000301019 ERCC5P28715 1186 aaPredicted RBP15.96■□□□□ 0.15
CDT1-201ENST00000301019 ADORA1P30542 326 aa15.96■□□□□ 0.15
CDT1-201ENST00000301019 CTDSPL2Q05D32 466 aa15.96■□□□□ 0.15
CDT1-201ENST00000301019 ZMYM1Q5SVZ6 1142 aa15.96■□□□□ 0.15
CDT1-201ENST00000301019 CDKAL1Q5VV42 579 aa15.96■□□□□ 0.15
CDT1-201ENST00000301019 IQCEQ6IPM2 695 aa15.96■□□□□ 0.15
CDT1-201ENST00000301019 APOA5Q6Q788 366 aa15.96■□□□□ 0.15
CDT1-201ENST00000301019 MARCH10Q8NA82 808 aaPredicted RBP15.96■□□□□ 0.15
CDT1-201ENST00000301019 TMEM165Q9HC07 324 aa15.96■□□□□ 0.15
CDT1-201ENST00000301019 SLC4A4Q9Y6R1 1079 aa15.96■□□□□ 0.15
CDT1-201ENST00000301019 PARP1P09874 1014 aaKnown RBP15.96■□□□□ 0.14
CDT1-201ENST00000301019 PTPREP23469 700 aa15.96■□□□□ 0.14
CDT1-201ENST00000301019 RNASELQ05823 741 aaKnown RBP15.96■□□□□ 0.14
CDT1-201ENST00000301019 SCARF1Q14162 830 aa15.96■□□□□ 0.14
CDT1-201ENST00000301019 ERICH1Q86X53 443 aa15.96■□□□□ 0.14
CDT1-201ENST00000301019 TBC1D10CQ8IV04 446 aa15.96■□□□□ 0.14
CDT1-201ENST00000301019 TRIM47Q96LD4 638 aa15.96■□□□□ 0.14
CDT1-201ENST00000301019 ELAC2Q9BQ52 826 aaKnown RBP15.96■□□□□ 0.14
CDT1-201ENST00000301019 SSRP1Q08945 709 aaKnown RBP15.95■□□□□ 0.14
CDT1-201ENST00000301019 ITGB3BPQ13352 177 aaPredicted RBP15.95■□□□□ 0.14
CDT1-201ENST00000301019 MB21D2Q8IYB1 491 aaPredicted RBP15.95■□□□□ 0.14
CDT1-201ENST00000301019 MGARPQ8TDB4 240 aa15.95■□□□□ 0.14
CDT1-201ENST00000301019 GCOM1H8Y6P7 765 aaPredicted RBP15.95■□□□□ 0.14
CDT1-201ENST00000301019 MYZAPP0CAP1 466 aa15.95■□□□□ 0.14
CDT1-201ENST00000301019 POLE2P56282 527 aa15.95■□□□□ 0.14
CDT1-201ENST00000301019 KRT83P78385 493 aa15.95■□□□□ 0.14
CDT1-201ENST00000301019 PAK1Q13153 545 aa15.95■□□□□ 0.14
CDT1-201ENST00000301019 GKAP1Q5VSY0 366 aaPredicted RBP15.95■□□□□ 0.14
CDT1-201ENST00000301019 CASKIN2Q8WXE0 1202 aa15.95■□□□□ 0.14
CDT1-201ENST00000301019 AP1M1Q9BXS5 423 aa15.95■□□□□ 0.14
CDT1-201ENST00000301019 ANGEL1Q9UNK9 670 aaKnown RBP15.95■□□□□ 0.14
CDT1-201ENST00000301019 IFIT3O14879 490 aaKnown RBP15.94■□□□□ 0.14
CDT1-201ENST00000301019 CTNND1O60716 968 aaKnown RBP15.94■□□□□ 0.14
CDT1-201ENST00000301019 IDH1O75874 414 aaKnown RBP15.94■□□□□ 0.14
CDT1-201ENST00000301019 VIMP08670 466 aaKnown RBP15.94■□□□□ 0.14
CDT1-201ENST00000301019 FLT3P36888 993 aa15.94■□□□□ 0.14
CDT1-201ENST00000301019 CCDC178Q5BJE1 867 aa15.94■□□□□ 0.14
CDT1-201ENST00000301019 ALS2CLQ60I27 953 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms