RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 DACT2Q5SW24 774 aa24.7■■□□□ 1.55
TPM4-201ENST00000300933 SH3BP5LQ7L8J4 393 aa24.7■■□□□ 1.55
TPM4-201ENST00000300933 TDRD3Q9H7E2 651 aaKnown RBP24.7■■□□□ 1.55
TPM4-201ENST00000300933 L2HGDHQ9H9P8 463 aa24.7■■□□□ 1.55
TPM4-201ENST00000300933 JMJD4Q9H9V9 463 aa24.7■■□□□ 1.55
TPM4-201ENST00000300933 RPN1P04843 607 aaKnown RBP24.7■■□□□ 1.54
TPM4-201ENST00000300933 TXKP42681 527 aa24.7■■□□□ 1.54
TPM4-201ENST00000300933 SNAP25P60880 206 aa24.7■■□□□ 1.54
TPM4-201ENST00000300933 CALCOCO1Q9P1Z2 691 aa24.7■■□□□ 1.54
TPM4-201ENST00000300933 FAM198AQ9UFP1 575 aa24.7■■□□□ 1.54
TPM4-201ENST00000300933 POLR3GO15318 223 aaPredicted RBP24.69■■□□□ 1.54
TPM4-201ENST00000300933 C21orf2O43822 256 aa24.69■■□□□ 1.54
TPM4-201ENST00000300933 GDF11O95390 407 aa24.69■■□□□ 1.54
TPM4-201ENST00000300933 CCT6AP40227 531 aaKnown RBP24.69■■□□□ 1.54
TPM4-201ENST00000300933 SPATA1Q5VX52 437 aa24.69■■□□□ 1.54
TPM4-201ENST00000300933 GALNT17Q6IS24 598 aa24.69■■□□□ 1.54
TPM4-201ENST00000300933 NEK8Q86SG6 692 aa24.69■■□□□ 1.54
TPM4-201ENST00000300933 GTPBP6O43824 516 aaPredicted RBP24.69■■□□□ 1.54
TPM4-201ENST00000300933 PNMA6AP0CW24 399 aaPredicted RBP24.69■■□□□ 1.54
TPM4-201ENST00000300933 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.69■■□□□ 1.541e-6■■□□□ 14.5
TPM4-201ENST00000300933 TDP2O95551 362 aa24.69■■□□□ 1.54
TPM4-201ENST00000300933 ZNF543Q08ER8 600 aa24.69■■□□□ 1.54
TPM4-201ENST00000300933 KRT25Q7Z3Z0 450 aa24.69■■□□□ 1.54
TPM4-201ENST00000300933 CCDC12Q8WUD4 166 aaPredicted RBP24.69■■□□□ 1.54
TPM4-201ENST00000300933 ZDHHC15Q96MV8 337 aa24.68■■□□□ 1.54
TPM4-201ENST00000300933 DNAI1Q9UI46 699 aa24.68■■□□□ 1.54
TPM4-201ENST00000300933 TRIM49BA6NDI0 452 aa24.68■■□□□ 1.54
TPM4-201ENST00000300933 OR52Z1P0C646 297 aa24.68■■□□□ 1.54
TPM4-201ENST00000300933 TNNI2P48788 182 aa24.68■■□□□ 1.54
TPM4-201ENST00000300933 SLC37A4O43826 429 aa24.67■■□□□ 1.54
TPM4-201ENST00000300933 PLCG1P19174 1290 aa24.67■■□□□ 1.54
TPM4-201ENST00000300933 CYP2C19P33261 490 aa24.67■■□□□ 1.54
TPM4-201ENST00000300933 PRCPP42785 496 aa24.67■■□□□ 1.54
TPM4-201ENST00000300933 CCDC93Q567U6 631 aa24.67■■□□□ 1.54
TPM4-201ENST00000300933 APTXQ7Z2E3 356 aaKnown RBP24.67■■□□□ 1.54
TPM4-201ENST00000300933 EDIL3O43854 480 aa24.67■■□□□ 1.54
TPM4-201ENST00000300933 TAL1P17542 331 aaPredicted RBP24.67■■□□□ 1.54
TPM4-201ENST00000300933 PLA2G4AP47712 749 aa24.67■■□□□ 1.54
TPM4-201ENST00000300933 HNRNPH2P55795 449 aaKnown RBP24.67■■□□□ 1.54
TPM4-201ENST00000300933 NR1I3Q14994 352 aa24.67■■□□□ 1.54
TPM4-201ENST00000300933 ASPRV1Q53RT3 343 aa24.67■■□□□ 1.54
TPM4-201ENST00000300933 STRIP1Q5VSL9 837 aa24.67■■□□□ 1.54
TPM4-201ENST00000300933 KCND1Q9NSA2 647 aa24.67■■□□□ 1.54
TPM4-201ENST00000300933 EEF2P13639 858 aaKnown RBP24.66■■□□□ 1.54
TPM4-201ENST00000300933 SEPT2Q15019 361 aa24.66■■□□□ 1.54
TPM4-201ENST00000300933 SPECC1LQ69YQ0 1117 aa24.66■■□□□ 1.54
TPM4-201ENST00000300933 NUP88Q99567 741 aaPredicted RBP24.66■■□□□ 1.54
TPM4-201ENST00000300933 SWAP70Q9UH65 585 aa24.66■■□□□ 1.54
TPM4-201ENST00000300933 SNHG28P0DPA3 235 aa24.66■■□□□ 1.54
TPM4-201ENST00000300933 ADCY7P51828 1080 aa24.66■■□□□ 1.54
TPM4-201ENST00000300933 CABP7Q86V35 215 aa24.66■■□□□ 1.54
TPM4-201ENST00000300933 FAM177A1Q8N128 213 aaPredicted RBP24.66■■□□□ 1.54
TPM4-201ENST00000300933 NELFBQ8WX92 580 aa24.66■■□□□ 1.54
TPM4-201ENST00000300933 FOCADQ5VW36 1801 aa24.65■■□□□ 1.54
TPM4-201ENST00000300933 NRXN2Q9P2S2 1712 aa24.65■■□□□ 1.54
TPM4-201ENST00000300933 SRCAPQ6ZRS2 3230 aa24.65■■□□□ 1.54
TPM4-201ENST00000300933 MYH8P13535 1937 aa24.65■■□□□ 1.54
TPM4-201ENST00000300933 SLC15A2Q16348 729 aa24.65■■□□□ 1.54
TPM4-201ENST00000300933 CERKLQ49MI3 558 aaPredicted RBP24.65■■□□□ 1.54
TPM4-201ENST00000300933 HPS3Q969F9 1004 aa24.65■■□□□ 1.54
TPM4-201ENST00000300933 PMS1P54277 932 aaKnown RBP24.65■■□□□ 1.54
TPM4-201ENST00000300933 UBXN4Q92575 508 aa24.65■■□□□ 1.54
TPM4-201ENST00000300933 PRMT6Q96LA8 375 aaPredicted RBP24.65■■□□□ 1.54
TPM4-201ENST00000300933 VPS16Q9H269 839 aa24.65■■□□□ 1.54
TPM4-201ENST00000300933 SEC31AO94979 1220 aaKnown RBP24.64■■□□□ 1.54
TPM4-201ENST00000300933 JAG1P78504 1218 aa24.64■■□□□ 1.54
TPM4-201ENST00000300933 TC2NQ8N9U0 490 aa24.64■■□□□ 1.54
TPM4-201ENST00000300933 TMX1Q9H3N1 280 aa24.64■■□□□ 1.54
TPM4-201ENST00000300933 PLIN4Q96Q06 1357 aa24.64■■□□□ 1.53
TPM4-201ENST00000300933 YDJCA8MPS7 323 aa24.64■■□□□ 1.53
TPM4-201ENST00000300933 CAPN2P17655 700 aa24.64■■□□□ 1.53
TPM4-201ENST00000300933 EPC1Q9H2F5 836 aa24.64■■□□□ 1.53
TPM4-201ENST00000300933 TBX2Q13207 712 aaPredicted RBP24.63■■□□□ 1.53
TPM4-201ENST00000300933 TMCO3Q6UWJ1 677 aa24.63■■□□□ 1.53
TPM4-201ENST00000300933 A0A1B0GTH6 734 aa24.63■■□□□ 1.53
TPM4-201ENST00000300933 PSDA5PKW4 1024 aaPredicted RBP24.63■■□□□ 1.53
TPM4-201ENST00000300933 POTEMA6NI47 508 aa24.63■■□□□ 1.53
TPM4-201ENST00000300933 USP17L15C9J2P7 530 aa24.63■■□□□ 1.53
TPM4-201ENST00000300933 USP17L13C9JLJ4 530 aa24.63■■□□□ 1.53
TPM4-201ENST00000300933 USP17L11C9JVI0 530 aa24.63■■□□□ 1.53
TPM4-201ENST00000300933 USP17L18D6R9N7 530 aa24.63■■□□□ 1.53
TPM4-201ENST00000300933 USP17L22D6RA61 530 aa24.63■■□□□ 1.53
TPM4-201ENST00000300933 USP17L17D6RBQ6 530 aa24.63■■□□□ 1.53
TPM4-201ENST00000300933 USP17L19D6RCP7 530 aa24.63■■□□□ 1.53
TPM4-201ENST00000300933 USP17L20D6RJB6 530 aa24.63■■□□□ 1.53
TPM4-201ENST00000300933 PPIP5K2O43314 1243 aa24.63■■□□□ 1.53
TPM4-201ENST00000300933 USP17L24Q0WX57 530 aa24.63■■□□□ 1.53
TPM4-201ENST00000300933 ZNF658Q5TYW1 1059 aaPredicted RBP24.63■■□□□ 1.53
TPM4-201ENST00000300933 CDKAL1Q5VV42 579 aa24.63■■□□□ 1.53
TPM4-201ENST00000300933 STYK1Q6J9G0 422 aa24.63■■□□□ 1.53
TPM4-201ENST00000300933 USP17L6PQ6QN14 398 aa24.63■■□□□ 1.53
TPM4-201ENST00000300933 TMEM139Q8IV31 216 aa24.63■■□□□ 1.53
TPM4-201ENST00000300933 NEK11Q8NG66 645 aa24.63■■□□□ 1.53
TPM4-201ENST00000300933 TRIM34Q9BYJ4 488 aa24.63■■□□□ 1.53
TPM4-201ENST00000300933 PNMA6FA0A0J9YX94 578 aa24.62■■□□□ 1.53
TPM4-201ENST00000300933 PAK1Q13153 545 aa24.62■■□□□ 1.53
TPM4-201ENST00000300933 MMTAG2Q9BU76 263 aaKnown RBP24.62■■□□□ 1.53
TPM4-201ENST00000300933 TAB2Q9NYJ8 693 aa24.62■■□□□ 1.53
TPM4-201ENST00000300933 RAD17O75943 681 aa24.62■■□□□ 1.53
TPM4-201ENST00000300933 URI1O94763 535 aaPredicted RBP24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms