RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ZNF263O14978 683 aa16.31■□□□□ 0.2
COL6A2-201ENST00000300527 CDR1P51861 262 aa16.31■□□□□ 0.2
COL6A2-201ENST00000300527 EVX2Q03828 476 aa16.31■□□□□ 0.2
COL6A2-201ENST00000300527 IQCA1Q86XH1 822 aa16.31■□□□□ 0.2
COL6A2-201ENST00000300527 ADSSL1Q8N142 457 aa16.31■□□□□ 0.2
COL6A2-201ENST00000300527 HEXIM1O94992 359 aaKnown RBP16.31■□□□□ 0.2
COL6A2-201ENST00000300527 FTCDO95954 541 aa16.31■□□□□ 0.2
COL6A2-201ENST00000300527 HDLBPQ00341 1268 aaKnown RBP16.31■□□□□ 0.2
COL6A2-201ENST00000300527 SF3B2Q13435 895 aaKnown RBP16.31■□□□□ 0.2
COL6A2-201ENST00000300527 TRADDQ15628 312 aa16.31■□□□□ 0.2
COL6A2-201ENST00000300527 CEP85LQ5SZL2 805 aa16.31■□□□□ 0.2
COL6A2-201ENST00000300527 TRIM58Q8NG06 486 aa16.31■□□□□ 0.2
COL6A2-201ENST00000300527 CCDC114Q96M63 670 aa16.31■□□□□ 0.2
COL6A2-201ENST00000300527 ZSCAN10Q96SZ4 725 aaPredicted RBP16.31■□□□□ 0.2
COL6A2-201ENST00000300527 NLRC4Q9NPP4 1024 aa16.31■□□□□ 0.2
COL6A2-201ENST00000300527 MARF1Q9Y4F3 1742 aaKnown RBP16.3■□□□□ 0.2
COL6A2-201ENST00000300527 DYNLL1P63167 89 aaKnown RBP16.3■□□□□ 0.2
COL6A2-201ENST00000300527 E2F5Q15329 346 aa16.3■□□□□ 0.2
COL6A2-201ENST00000300527 PUM3Q15397 648 aaKnown RBP16.3■□□□□ 0.2
COL6A2-201ENST00000300527 ZCRB1Q8TBF4 217 aaKnown RBP16.3■□□□□ 0.2
COL6A2-201ENST00000300527 FCER1AP12319 257 aa16.3■□□□□ 0.2
COL6A2-201ENST00000300527 LSP1P33241 339 aa16.3■□□□□ 0.2
COL6A2-201ENST00000300527 ZBED6P86452 979 aa16.3■□□□□ 0.2
COL6A2-201ENST00000300527 CACNA2D4Q7Z3S7 1137 aa16.3■□□□□ 0.2
COL6A2-201ENST00000300527 KRT12Q99456 494 aa16.3■□□□□ 0.2
COL6A2-201ENST00000300527 HYOU1Q9Y4L1 999 aa16.3■□□□□ 0.2
COL6A2-201ENST00000300527 GOLGA6L7A0A1B0GV03 622 aa16.29■□□□□ 0.2
COL6A2-201ENST00000300527 MEFVO15553 781 aaPredicted RBP16.29■□□□□ 0.2
COL6A2-201ENST00000300527 KIF11P52732 1056 aa16.29■□□□□ 0.2
COL6A2-201ENST00000300527 HAUS3Q68CZ6 603 aa16.29■□□□□ 0.2
COL6A2-201ENST00000300527 DTHD1Q6ZMT9 781 aa16.29■□□□□ 0.2
COL6A2-201ENST00000300527 BANK1Q8NDB2 785 aa16.29■□□□□ 0.2
COL6A2-201ENST00000300527 OR2W6PQ8NHA6 318 aa16.29■□□□□ 0.2
COL6A2-201ENST00000300527 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.29■□□□□ 0.2
COL6A2-201ENST00000300527 NR1D1P20393 614 aa16.29■□□□□ 0.2
COL6A2-201ENST00000300527 ALX1Q15699 326 aa16.29■□□□□ 0.2
COL6A2-201ENST00000300527 NAA35Q5VZE5 725 aa16.29■□□□□ 0.2
COL6A2-201ENST00000300527 LPIN2Q92539 896 aa16.29■□□□□ 0.2
COL6A2-201ENST00000300527 SLC39A2Q9NP94 309 aa16.29■□□□□ 0.2
COL6A2-201ENST00000300527 WDR17Q8IZU2 1322 aa16.29■□□□□ 0.2
COL6A2-201ENST00000300527 RTL9Q8NET4 1388 aa16.29■□□□□ 0.2
COL6A2-201ENST00000300527 C4AP0C0L4 1744 aa16.29■□□□□ 0.2
COL6A2-201ENST00000300527 C4BP0C0L5 1744 aa16.29■□□□□ 0.2
COL6A2-201ENST00000300527 CCDC194A0A1B0GVG4 234 aa16.29■□□□□ 0.2
COL6A2-201ENST00000300527 EPHB6O15197 1021 aa16.29■□□□□ 0.2
COL6A2-201ENST00000300527 GLI1P08151 1106 aa16.29■□□□□ 0.2
COL6A2-201ENST00000300527 CCDC172P0C7W6 258 aa16.29■□□□□ 0.2
COL6A2-201ENST00000300527 EEF1GP26641 437 aaKnown RBP16.29■□□□□ 0.2
COL6A2-201ENST00000300527 GFPT1Q06210 699 aaPredicted RBP16.29■□□□□ 0.2
COL6A2-201ENST00000300527 ANKRD40Q6AI12 368 aa16.29■□□□□ 0.2
COL6A2-201ENST00000300527 SRBD1Q8N5C6 995 aaKnown RBP16.29■□□□□ 0.2
COL6A2-201ENST00000300527 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.29■□□□□ 0.2
COL6A2-201ENST00000300527 ABCC12Q96J65 1359 aa16.29■□□□□ 0.2
COL6A2-201ENST00000300527 RIC1Q4ADV7 1423 aa16.29■□□□□ 0.2
COL6A2-201ENST00000300527 KIRREL3Q8IZU9 778 aa16.28■□□□□ 0.2
COL6A2-201ENST00000300527 KAT6BQ8WYB5 2073 aa16.28■□□□□ 0.2
COL6A2-201ENST00000300527 ANO9A1A5B4 782 aa16.28■□□□□ 0.2
COL6A2-201ENST00000300527 SRGNP10124 158 aa16.28■□□□□ 0.2
COL6A2-201ENST00000300527 INF2Q27J81 1249 aa16.28■□□□□ 0.2
COL6A2-201ENST00000300527 MICALCLQ6ZW33 695 aa16.28■□□□□ 0.2
COL6A2-201ENST00000300527 ZNF507Q8TCN5 953 aa16.28■□□□□ 0.2
COL6A2-201ENST00000300527 ZNF473Q8WTR7 871 aaKnown RBP16.28■□□□□ 0.2
COL6A2-201ENST00000300527 DISC1Q9NRI5 854 aa16.28■□□□□ 0.2
COL6A2-201ENST00000300527 ASAP1Q9ULH1 1129 aa16.28■□□□□ 0.2
COL6A2-201ENST00000300527 PDS5AQ29RF7 1337 aaKnown RBP16.28■□□□□ 0.2
COL6A2-201ENST00000300527 GOLGA6L10A6NI86 522 aa16.28■□□□□ 0.2
COL6A2-201ENST00000300527 PRPF3O43395 683 aaKnown RBP16.28■□□□□ 0.2
COL6A2-201ENST00000300527 CSF1RP07333 972 aa16.28■□□□□ 0.2
COL6A2-201ENST00000300527 ADGRA1Q86SQ6 560 aa16.28■□□□□ 0.2
COL6A2-201ENST00000300527 FNBP4Q8N3X1 1017 aaPredicted RBP16.28■□□□□ 0.2
COL6A2-201ENST00000300527 CCDC155Q8N6L0 562 aa16.28■□□□□ 0.2
COL6A2-201ENST00000300527 SUFUQ9UMX1 484 aa16.28■□□□□ 0.2
COL6A2-201ENST00000300527 JAG2Q9Y219 1238 aa16.28■□□□□ 0.2
COL6A2-201ENST00000300527 SPATA31A3Q5VYP0 1347 aa16.27■□□□□ 0.2
COL6A2-201ENST00000300527 MAGEB6P1A0A0J9YX57 407 aa16.27■□□□□ 0.2
COL6A2-201ENST00000300527 SWT1Q5T5J6 900 aaKnown RBP16.27■□□□□ 0.2
COL6A2-201ENST00000300527 TEX2Q8IWB9 1127 aa16.27■□□□□ 0.2
COL6A2-201ENST00000300527 CCDC47Q96A33 483 aaKnown RBP16.27■□□□□ 0.2
COL6A2-201ENST00000300527 TMEM60Q9H2L4 133 aa16.27■□□□□ 0.2
COL6A2-201ENST00000300527 MYCNP04198 464 aaPredicted RBP16.27■□□□□ 0.19
COL6A2-201ENST00000300527 STK4Q13043 487 aa16.27■□□□□ 0.19
COL6A2-201ENST00000300527 CCDC121Q6ZUS5 278 aa16.27■□□□□ 0.19
COL6A2-201ENST00000300527 NLRP10Q86W26 655 aa16.27■□□□□ 0.19
COL6A2-201ENST00000300527 MMGT1Q8N4V1 131 aa16.27■□□□□ 0.19
COL6A2-201ENST00000300527 CCT8L2Q96SF2 557 aa16.27■□□□□ 0.19
COL6A2-201ENST00000300527 SH3GL2Q99962 352 aa16.27■□□□□ 0.19
COL6A2-201ENST00000300527 ARHGAP20Q9P2F6 1191 aa16.27■□□□□ 0.19
COL6A2-201ENST00000300527 A0A1W2PQC6 194 aa16.27■□□□□ 0.19
COL6A2-201ENST00000300527 NF2P35240 595 aa16.27■□□□□ 0.19
COL6A2-201ENST00000300527 IFT20Q8IY31 132 aa16.27■□□□□ 0.19
COL6A2-201ENST00000300527 TSGA10Q9BZW7 698 aa16.27■□□□□ 0.19
COL6A2-201ENST00000300527 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.27■□□□□ 0.19
COL6A2-201ENST00000300527 SALL4Q9UJQ4 1053 aa16.27■□□□□ 0.19
COL6A2-201ENST00000300527 FBXO3Q9UK99 471 aa16.27■□□□□ 0.19
COL6A2-201ENST00000300527 RASSF10A6NK89 507 aa16.26■□□□□ 0.19
COL6A2-201ENST00000300527 SCG2P13521 617 aa16.26■□□□□ 0.19
COL6A2-201ENST00000300527 SCP2P22307 547 aa16.26■□□□□ 0.19
COL6A2-201ENST00000300527 EMBQ6PCB8 327 aa16.26■□□□□ 0.19
COL6A2-201ENST00000300527 DYMQ7RTS9 669 aa16.26■□□□□ 0.19
COL6A2-201ENST00000300527 CCDC170Q8IYT3 715 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms