RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 ZNF526Q8TF50 670 aaPredicted RBP11.34□□□□□ -0.59
FOXN4-201ENST00000299162 NCAPGQ9BPX3 1015 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 RASSF4Q9H2L5 321 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 C6orf50Q9HD87 102 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 TCP11L1Q9NUJ3 509 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 FHOD1Q9Y613 1164 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 PMS1P54277 932 aaKnown RBP11.34□□□□□ -0.59
FOXN4-201ENST00000299162 PPP4CP60510 307 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 NONOQ15233 471 aaKnown RBP eCLIP11.34□□□□□ -0.59
FOXN4-201ENST00000299162 CRY2Q49AN0 593 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 SPATA1Q5VX52 437 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 REXO1Q8N1G1 1221 aaKnown RBP11.34□□□□□ -0.59
FOXN4-201ENST00000299162 TBC1D7Q9P0N9 293 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 SERPINB13Q9UIV8 391 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 PPP2R2CQ9Y2T4 447 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.34□□□□□ -0.59
FOXN4-201ENST00000299162 PARP3Q9Y6F1 533 aa11.34□□□□□ -0.59
FOXN4-201ENST00000299162 ARAP2Q8WZ64 1704 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 FAM170AA1A519 330 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 PALM3A6NDB9 673 aaPredicted RBP11.33□□□□□ -0.6
FOXN4-201ENST00000299162 PLCG2P16885 1265 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 CACNB1Q02641 598 aaPredicted RBP11.33□□□□□ -0.6
FOXN4-201ENST00000299162 UBXN1Q04323 297 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 PAK1Q13153 545 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 USH1GQ495M9 461 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 CABP7Q86V35 215 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 TC2NQ8N9U0 490 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 NEDD1Q8NHV4 660 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 DISC1Q9NRI5 854 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 TFR2Q9UP52 801 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 ECM29Q5VYK3 1845 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 NID2Q14112 1375 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 USP17L10C9JJH3 530 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 FCER1AP12319 257 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 IL1R1P14778 569 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 ZYXQ15942 572 aaKnown RBP11.33□□□□□ -0.6
FOXN4-201ENST00000299162 SLF2Q8IX21 1173 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 LRRC15Q8TF66 581 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 CDK5RAP3Q96JB5 506 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 SRRTQ9BXP5 876 aaKnown RBP11.33□□□□□ -0.6
FOXN4-201ENST00000299162 SLC39A2Q9NP94 309 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 BCORQ6W2J9 1755 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 USP17L15C9J2P7 530 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 USP17L13C9JLJ4 530 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 USP17L11C9JVI0 530 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 USP17L18D6R9N7 530 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 USP17L22D6RA61 530 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 USP17L17D6RBQ6 530 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 USP17L19D6RCP7 530 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 USP17L20D6RJB6 530 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 TFRCP02786 760 aaKnown RBP11.33□□□□□ -0.6
FOXN4-201ENST00000299162 PDHBP11177 359 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 ZNF18P17022 549 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 USP17L24Q0WX57 530 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 KRT31Q15323 416 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 SYCP1Q15431 976 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 CDC42EP5Q6NZY7 148 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 PDXDC2PQ6P474 469 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 USP17L6PQ6QN14 398 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 TRMT1LQ7Z2T5 733 aaKnown RBP11.33□□□□□ -0.6
FOXN4-201ENST00000299162 CERKQ8TCT0 537 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 GSDMAQ96QA5 445 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 WDR24Q96S15 920 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 CEP83Q9Y592 693 aa11.33□□□□□ -0.6
FOXN4-201ENST00000299162 PCNTO95613 3336 aa11.32□□□□□ -0.6
FOXN4-201ENST00000299162 AKR1B15C9JRZ8 316 aaPredicted RBP11.32□□□□□ -0.6
FOXN4-201ENST00000299162 ADRA2BP18089 450 aa11.32□□□□□ -0.6
FOXN4-201ENST00000299162 PDE4DQ08499 809 aa11.32□□□□□ -0.6
FOXN4-201ENST00000299162 TBC1D22AQ8WUA7 517 aa11.32□□□□□ -0.6
FOXN4-201ENST00000299162 RABEP2Q9H5N1 569 aa11.32□□□□□ -0.6
FOXN4-201ENST00000299162 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.32□□□□□ -0.6
FOXN4-201ENST00000299162 SRGNP10124 158 aa11.32□□□□□ -0.6
FOXN4-201ENST00000299162 FXR1P51114 621 aaKnown RBP eCLIP11.32□□□□□ -0.6
FOXN4-201ENST00000299162 LRRC41Q15345 812 aa11.32□□□□□ -0.6
FOXN4-201ENST00000299162 E2F4Q16254 413 aa11.32□□□□□ -0.6
FOXN4-201ENST00000299162 ICE2Q659A1 982 aa11.32□□□□□ -0.6
FOXN4-201ENST00000299162 C2CD5Q86YS7 1000 aa11.32□□□□□ -0.6
FOXN4-201ENST00000299162 ACRBPQ8NEB7 543 aa11.32□□□□□ -0.6
FOXN4-201ENST00000299162 TEKT1Q969V4 418 aa11.32□□□□□ -0.6
FOXN4-201ENST00000299162 DRC1Q96MC2 740 aa11.32□□□□□ -0.6
FOXN4-201ENST00000299162 MTMR4Q9NYA4 1195 aa11.32□□□□□ -0.6
FOXN4-201ENST00000299162 PPP1R1BQ9UD71 204 aaPredicted RBP11.32□□□□□ -0.6
FOXN4-201ENST00000299162 ATP6V0A2Q9Y487 856 aa11.32□□□□□ -0.6
FOXN4-201ENST00000299162 COL5A3P25940 1745 aaPredicted RBP11.32□□□□□ -0.6
FOXN4-201ENST00000299162 CLRN2A0PK11 232 aa11.31□□□□□ -0.6
FOXN4-201ENST00000299162 KCNJ18B7U540 433 aa11.31□□□□□ -0.6
FOXN4-201ENST00000299162 RNF225M0QZC1 329 aaPredicted RBP11.31□□□□□ -0.6
FOXN4-201ENST00000299162 GTPBP6O43824 516 aaPredicted RBP11.31□□□□□ -0.6
FOXN4-201ENST00000299162 SLC37A4O43826 429 aa11.31□□□□□ -0.6
FOXN4-201ENST00000299162 OR52Z1P0C646 297 aa11.31□□□□□ -0.6
FOXN4-201ENST00000299162 KCNJ12Q14500 433 aa11.31□□□□□ -0.6
FOXN4-201ENST00000299162 SMC1AQ14683 1233 aaKnown RBP11.31□□□□□ -0.6
FOXN4-201ENST00000299162 AOC3Q16853 763 aa11.31□□□□□ -0.6
FOXN4-201ENST00000299162 SLC30A10Q6XR72 485 aa11.31□□□□□ -0.6
FOXN4-201ENST00000299162 NEK8Q86SG6 692 aa11.31□□□□□ -0.6
FOXN4-201ENST00000299162 TDRD3Q9H7E2 651 aaKnown RBP11.31□□□□□ -0.6
FOXN4-201ENST00000299162 VPS18Q9P253 973 aa11.31□□□□□ -0.6
FOXN4-201ENST00000299162 TIAM2Q8IVF5 1701 aa11.31□□□□□ -0.6
FOXN4-201ENST00000299162 MYO1CO00159 1063 aa11.31□□□□□ -0.6
FOXN4-201ENST00000299162 IBSPP21815 317 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms