RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 MAP3K15Q6ZN16 1313 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 MRC1P22897 1456 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 TOPAZ1Q8N9V7 1692 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 BICDL2A1A5D9 508 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 ZSCAN5CA6NGD5 496 aaPredicted RBP12.66□□□□□ -0.38
TRUB1-201ENST00000298746 SMIM22K7EJ46 135 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 LSP1P33241 339 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 ATP2C1P98194 919 aaPredicted RBP12.66□□□□□ -0.38
TRUB1-201ENST00000298746 CCDC40Q4G0X9 1142 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 EP400NLQ6ZTU2 488 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 TEX2Q8IWB9 1127 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 DNAJC10Q8IXB1 793 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 AENQ8WTP8 325 aaKnown RBP12.66□□□□□ -0.38
TRUB1-201ENST00000298746 N4BP2L2Q92802 583 aaPredicted RBP12.66□□□□□ -0.38
TRUB1-201ENST00000298746 CDK5RAP3Q96JB5 506 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 RBM12Q9NTZ6 932 aaKnown RBP12.66□□□□□ -0.38
TRUB1-201ENST00000298746 MAGEB6P1A0A0J9YX57 407 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 TSPY2A6NKD2 308 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 MARCH6O60337 910 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 FTCDO95954 541 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 EPS15P42566 896 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 CTSWP56202 376 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 TTMPQ5BVD1 217 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 CPLX4Q7Z7G2 160 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 LUC7LQ9NQ29 371 aaKnown RBP12.66□□□□□ -0.38
TRUB1-201ENST00000298746 ODF2LQ9ULJ1 636 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 SUFUQ9UMX1 484 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 MYH10P35580 1976 aa12.66□□□□□ -0.38
TRUB1-201ENST00000298746 TMCO5BA8MYB1 307 aa12.65□□□□□ -0.38
TRUB1-201ENST00000298746 STARD3NLO95772 234 aa12.65□□□□□ -0.38
TRUB1-201ENST00000298746 EZRP15311 586 aaKnown RBP12.65□□□□□ -0.38
TRUB1-201ENST00000298746 GBP2P32456 591 aaPredicted RBP12.65□□□□□ -0.38
TRUB1-201ENST00000298746 TMC4Q7Z404 712 aa12.65□□□□□ -0.38
TRUB1-201ENST00000298746 ADSSL1Q8N142 457 aa12.65□□□□□ -0.38
TRUB1-201ENST00000298746 ENAHQ8N8S7 591 aaPredicted RBP12.65□□□□□ -0.38
TRUB1-201ENST00000298746 STAG1Q8WVM7 1258 aa12.65□□□□□ -0.38
TRUB1-201ENST00000298746 UBLCP1Q8WVY7 318 aaPredicted RBP12.65□□□□□ -0.38
TRUB1-201ENST00000298746 PHF20Q9BVI0 1012 aa12.65□□□□□ -0.38
TRUB1-201ENST00000298746 SLC39A2Q9NP94 309 aa12.65□□□□□ -0.38
TRUB1-201ENST00000298746 TMOD3Q9NYL9 352 aa12.65□□□□□ -0.38
TRUB1-201ENST00000298746 A0A1W2PQC6 194 aa12.65□□□□□ -0.38
TRUB1-201ENST00000298746 IFFO1Q0D2I5 559 aa12.65□□□□□ -0.38
TRUB1-201ENST00000298746 HEATR3Q7Z4Q2 680 aa12.65□□□□□ -0.38
TRUB1-201ENST00000298746 CHUKO15111 745 aa12.65□□□□□ -0.39
TRUB1-201ENST00000298746 PRPF3O43395 683 aaKnown RBP12.65□□□□□ -0.39
TRUB1-201ENST00000298746 RPSAP08865 295 aaKnown RBP12.65□□□□□ -0.39
TRUB1-201ENST00000298746 EHHADHQ08426 723 aa12.65□□□□□ -0.39
TRUB1-201ENST00000298746 NEDD9Q14511 834 aa12.65□□□□□ -0.39
TRUB1-201ENST00000298746 ALX1Q15699 326 aa12.65□□□□□ -0.39
TRUB1-201ENST00000298746 SWT1Q5T5J6 900 aaKnown RBP12.65□□□□□ -0.39
TRUB1-201ENST00000298746 NAA35Q5VZE5 725 aa12.65□□□□□ -0.39
TRUB1-201ENST00000298746 AEBP2Q6ZN18 517 aaPredicted RBP12.65□□□□□ -0.39
TRUB1-201ENST00000298746 HPS3Q969F9 1004 aa12.65□□□□□ -0.39
TRUB1-201ENST00000298746 CCT8L2Q96SF2 557 aa12.65□□□□□ -0.39
TRUB1-201ENST00000298746 THAP9Q9H5L6 903 aa12.65□□□□□ -0.39
TRUB1-201ENST00000298746 PRDM11Q9NQV5 511 aa12.65□□□□□ -0.39
TRUB1-201ENST00000298746 DISC1Q9NRI5 854 aa12.65□□□□□ -0.39
TRUB1-201ENST00000298746 RBM28Q9NW13 759 aaKnown RBP12.65□□□□□ -0.39
TRUB1-201ENST00000298746 PACSIN2Q9UNF0 486 aaPredicted RBP12.65□□□□□ -0.39
TRUB1-201ENST00000298746 CEP83Q9Y592 693 aa12.65□□□□□ -0.39
TRUB1-201ENST00000298746 FAM170AA1A519 330 aa12.64□□□□□ -0.39
TRUB1-201ENST00000298746 SHOX2O60902 331 aaPredicted RBP12.64□□□□□ -0.39
TRUB1-201ENST00000298746 PPP1R37O75864 691 aa12.64□□□□□ -0.39
TRUB1-201ENST00000298746 SCG2P13521 617 aa12.64□□□□□ -0.39
TRUB1-201ENST00000298746 HDLBPQ00341 1268 aaKnown RBP12.64□□□□□ -0.39
TRUB1-201ENST00000298746 NAA25Q14CX7 972 aa12.64□□□□□ -0.39
TRUB1-201ENST00000298746 KCTD19Q17RG1 926 aaPredicted RBP12.64□□□□□ -0.39
TRUB1-201ENST00000298746 INF2Q27J81 1249 aa12.64□□□□□ -0.39
TRUB1-201ENST00000298746 KCNV1Q6PIU1 500 aa12.64□□□□□ -0.39
TRUB1-201ENST00000298746 CREG2Q8IUH2 290 aa12.64□□□□□ -0.39
TRUB1-201ENST00000298746 ARFGAP2Q8N6H7 521 aa12.64□□□□□ -0.39
TRUB1-201ENST00000298746 ZNF473Q8WTR7 871 aaKnown RBP12.64□□□□□ -0.39
TRUB1-201ENST00000298746 MTRQ99707 1265 aa12.64□□□□□ -0.39
TRUB1-201ENST00000298746 KLC4Q9NSK0 619 aa12.64□□□□□ -0.39
TRUB1-201ENST00000298746 TACC3Q9Y6A5 838 aa12.64□□□□□ -0.39
TRUB1-201ENST00000298746 MED1Q15648 1581 aaPredicted RBP12.64□□□□□ -0.39
TRUB1-201ENST00000298746 WDR17Q8IZU2 1322 aa12.64□□□□□ -0.39
TRUB1-201ENST00000298746 LTN1O94822 1766 aa12.64□□□□□ -0.39
TRUB1-201ENST00000298746 RGPD2P0DJD1 1756 aa12.64□□□□□ -0.39
TRUB1-201ENST00000298746 GCOM1H8Y6P7 765 aaPredicted RBP12.64□□□□□ -0.39
TRUB1-201ENST00000298746 NMT2O60551 498 aa12.64□□□□□ -0.39
TRUB1-201ENST00000298746 MYZAPP0CAP1 466 aa12.64□□□□□ -0.39
TRUB1-201ENST00000298746 EVA1CP58658 441 aa12.64□□□□□ -0.39
TRUB1-201ENST00000298746 PDXDC2PQ6P474 469 aa12.64□□□□□ -0.39
TRUB1-201ENST00000298746 DYMQ7RTS9 669 aa12.64□□□□□ -0.39
TRUB1-201ENST00000298746 NLRP14Q86W24 1093 aa12.64□□□□□ -0.39
TRUB1-201ENST00000298746 MMGT1Q8N4V1 131 aa12.64□□□□□ -0.39
TRUB1-201ENST00000298746 P2RX5Q93086 422 aa12.64□□□□□ -0.39
TRUB1-201ENST00000298746 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.64□□□□□ -0.398e-7■■■□□ 16
TRUB1-201ENST00000298746 SRGNP10124 158 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 CLNS1AP54105 237 aaKnown RBP12.63□□□□□ -0.39
TRUB1-201ENST00000298746 GFPT1Q06210 699 aaPredicted RBP12.63□□□□□ -0.39
TRUB1-201ENST00000298746 HLFQ16534 295 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 IRF2BP1Q8IU81 584 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 ISCA1Q9BUE6 129 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 CALM1P0DP23 149 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 CALM2P0DP24 149 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 CALM3P0DP25 149 aa12.63□□□□□ -0.39
TRUB1-201ENST00000298746 LONP1P36776 959 aaKnown RBP12.63□□□□□ -0.39
TRUB1-201ENST00000298746 PPP2R5BQ15173 497 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms