RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 CAPN11Q9UMQ6 739 aa27.31■■□□□ 1.96
SPTSSA-201ENST00000298130 PDS5AQ29RF7 1337 aaKnown RBP27.31■■□□□ 1.96
SPTSSA-201ENST00000298130 ERLIN1O75477 346 aa27.31■■□□□ 1.96
SPTSSA-201ENST00000298130 RHOBTB3O94955 611 aa27.31■■□□□ 1.96
SPTSSA-201ENST00000298130 ATP2B2Q01814 1243 aa27.31■■□□□ 1.96
SPTSSA-201ENST00000298130 DNAJC7Q99615 494 aa27.31■■□□□ 1.96
SPTSSA-201ENST00000298130 COL16A1Q07092 1604 aaPredicted RBP27.3■■□□□ 1.96
SPTSSA-201ENST00000298130 SMCO2A6NFE2 343 aa27.3■■□□□ 1.96
SPTSSA-201ENST00000298130 SLC10A5Q5PT55 438 aa27.3■■□□□ 1.96
SPTSSA-201ENST00000298130 EXOC1Q9NV70 894 aa27.3■■□□□ 1.96
SPTSSA-201ENST00000298130 SCN7AQ01118 1682 aa27.3■■□□□ 1.96
SPTSSA-201ENST00000298130 FLT1P17948 1338 aa27.3■■□□□ 1.96
SPTSSA-201ENST00000298130 HNRNPLLQ8WVV9 542 aaKnown RBP27.3■■□□□ 1.96
SPTSSA-201ENST00000298130 SMARCC1Q92922 1105 aaPredicted RBP27.3■■□□□ 1.96
SPTSSA-201ENST00000298130 JAKMIP2Q96AA8 810 aa27.3■■□□□ 1.96
SPTSSA-201ENST00000298130 CDCA7Q9BWT1 371 aaPredicted RBP27.3■■□□□ 1.96
SPTSSA-201ENST00000298130 TRIM9Q9C026 710 aa27.3■■□□□ 1.96
SPTSSA-201ENST00000298130 ANKRD2Q9GZV1 360 aa27.3■■□□□ 1.96
SPTSSA-201ENST00000298130 NHEJ1Q9H9Q4 299 aaPredicted RBP27.3■■□□□ 1.96
SPTSSA-201ENST00000298130 EEF1GP26641 437 aaKnown RBP27.29■■□□□ 1.96
SPTSSA-201ENST00000298130 TM4SF1P30408 202 aa27.29■■□□□ 1.96
SPTSSA-201ENST00000298130 TXKP42681 527 aa27.29■■□□□ 1.96
SPTSSA-201ENST00000298130 DYMQ7RTS9 669 aa27.29■■□□□ 1.96
SPTSSA-201ENST00000298130 TCP11L1Q9NUJ3 509 aa27.29■■□□□ 1.96
SPTSSA-201ENST00000298130 ZPR1O75312 459 aa27.29■■□□□ 1.96
SPTSSA-201ENST00000298130 RASA1P20936 1047 aa27.29■■□□□ 1.96
SPTSSA-201ENST00000298130 TRAPPC11Q7Z392 1133 aa27.29■■□□□ 1.96
SPTSSA-201ENST00000298130 NOC4LQ9BVI4 516 aaKnown RBP27.29■■□□□ 1.96
SPTSSA-201ENST00000298130 SH3GLB2Q9NR46 395 aa27.29■■□□□ 1.96
SPTSSA-201ENST00000298130 POTEDQ86YR6 584 aa27.28■■□□□ 1.96
SPTSSA-201ENST00000298130 P2RX5Q93086 422 aa27.28■■□□□ 1.96
SPTSSA-201ENST00000298130 PSMB7Q99436 277 aa27.28■■□□□ 1.96
SPTSSA-201ENST00000298130 THAP9Q9H5L6 903 aa27.28■■□□□ 1.96
SPTSSA-201ENST00000298130 TNNT3P45378 269 aaPredicted RBP27.28■■□□□ 1.96
SPTSSA-201ENST00000298130 IRX5P78411 483 aaPredicted RBP27.28■■□□□ 1.96
SPTSSA-201ENST00000298130 GPS2Q13227 327 aa27.28■■□□□ 1.96
SPTSSA-201ENST00000298130 KCNB1Q14721 858 aa27.28■■□□□ 1.96
SPTSSA-201ENST00000298130 ZSCAN26Q16670 478 aa27.28■■□□□ 1.96
SPTSSA-201ENST00000298130 TXLNBQ8N3L3 684 aa27.28■■□□□ 1.96
SPTSSA-201ENST00000298130 CCDC148Q8NFR7 591 aa27.28■■□□□ 1.96
SPTSSA-201ENST00000298130 PIGSQ96S52 555 aa27.28■■□□□ 1.96
SPTSSA-201ENST00000298130 CCSER1Q9C0I3 900 aa27.28■■□□□ 1.96
SPTSSA-201ENST00000298130 SAR1BQ9Y6B6 198 aa27.28■■□□□ 1.96
SPTSSA-201ENST00000298130 OR52Z1P0C646 297 aa27.27■■□□□ 1.96
SPTSSA-201ENST00000298130 EIF6P56537 245 aaKnown RBP27.27■■□□□ 1.96
SPTSSA-201ENST00000298130 GJA10Q969M2 543 aa27.27■■□□□ 1.96
SPTSSA-201ENST00000298130 HAUS4Q9H6D7 363 aa27.27■■□□□ 1.96
SPTSSA-201ENST00000298130 FRMPD2Q68DX3 1309 aaPredicted RBP27.27■■□□□ 1.96
SPTSSA-201ENST00000298130 PALM3A6NDB9 673 aaPredicted RBP27.27■■□□□ 1.96
SPTSSA-201ENST00000298130 EPHB6O15197 1021 aa27.27■■□□□ 1.96
SPTSSA-201ENST00000298130 SRGNP10124 158 aa27.27■■□□□ 1.96
SPTSSA-201ENST00000298130 DNM2P50570 870 aa27.27■■□□□ 1.96
SPTSSA-201ENST00000298130 TBCKQ8TEA7 893 aa27.27■■□□□ 1.96
SPTSSA-201ENST00000298130 POTEB2H3BUK9 544 aa27.26■■□□□ 1.96
SPTSSA-201ENST00000298130 TPTE2Q6XPS3 522 aa27.26■■□□□ 1.96
SPTSSA-201ENST00000298130 CLEC10AQ8IUN9 316 aa27.26■■□□□ 1.96
SPTSSA-201ENST00000298130 RIN2Q8WYP3 895 aaPredicted RBP27.26■■□□□ 1.96
SPTSSA-201ENST00000298130 FAM207AQ9NSI2 230 aaPredicted RBP27.26■■□□□ 1.96
SPTSSA-201ENST00000298130 MYO1AQ9UBC5 1043 aa27.26■■□□□ 1.96
SPTSSA-201ENST00000298130 DLEC1Q9Y238 1755 aa27.26■■□□□ 1.96
SPTSSA-201ENST00000298130 PDE2AO00408 941 aaPredicted RBP27.26■■□□□ 1.95
SPTSSA-201ENST00000298130 FAM193AP78312 1265 aa27.26■■□□□ 1.95
SPTSSA-201ENST00000298130 KIAA0895Q8NCT3 520 aa27.26■■□□□ 1.95
SPTSSA-201ENST00000298130 JADE2Q9NQC1 790 aa27.26■■□□□ 1.95
SPTSSA-201ENST00000298130 A0A1W2PQC6 194 aa27.26■■□□□ 1.95
SPTSSA-201ENST00000298130 CAGE1Q8TC20 777 aa27.26■■□□□ 1.95
SPTSSA-201ENST00000298130 EYA3Q99504 573 aa27.26■■□□□ 1.95
SPTSSA-201ENST00000298130 SPATA31A5Q5VU36 1347 aa27.25■■□□□ 1.95
SPTSSA-201ENST00000298130 SPATA31A7Q8IWB4 1347 aa27.25■■□□□ 1.95
SPTSSA-201ENST00000298130 A0A0U1RQG5 324 aaPredicted RBP27.25■■□□□ 1.95
SPTSSA-201ENST00000298130 SKIDA1Q1XH10 827 aa27.25■■□□□ 1.95
SPTSSA-201ENST00000298130 MIIPQ5JXC2 388 aa27.25■■□□□ 1.95
SPTSSA-201ENST00000298130 MMTAG2Q9BU76 263 aaKnown RBP27.25■■□□□ 1.95
SPTSSA-201ENST00000298130 TTYH3Q9C0H2 523 aa27.25■■□□□ 1.95
SPTSSA-201ENST00000298130 LRWD1Q9UFC0 647 aa27.25■■□□□ 1.95
SPTSSA-201ENST00000298130 PSMD14O00487 310 aa27.25■■□□□ 1.95
SPTSSA-201ENST00000298130 ZNF263O14978 683 aa27.25■■□□□ 1.95
SPTSSA-201ENST00000298130 GNAQP50148 359 aa27.25■■□□□ 1.95
SPTSSA-201ENST00000298130 RAD51AP2Q09MP3 1159 aa27.25■■□□□ 1.95
SPTSSA-201ENST00000298130 GLIS3Q8NEA6 775 aa27.25■■□□□ 1.95
SPTSSA-201ENST00000298130 SEMA6BQ9H3T3 888 aa27.25■■□□□ 1.95
SPTSSA-201ENST00000298130 NARFQ9UHQ1 456 aa27.25■■□□□ 1.95
SPTSSA-201ENST00000298130 CCNE1P24864 410 aa27.24■■□□□ 1.95
SPTSSA-201ENST00000298130 MAPK8IP2Q13387 824 aaPredicted RBP27.24■■□□□ 1.95
SPTSSA-201ENST00000298130 NONOQ15233 471 aaKnown RBP eCLIP27.24■■□□□ 1.95
SPTSSA-201ENST00000298130 SPTY2D1Q68D10 685 aaPredicted RBP27.24■■□□□ 1.95
SPTSSA-201ENST00000298130 SMARCAL1Q9NZC9 954 aa27.24■■□□□ 1.95
SPTSSA-201ENST00000298130 KDM4FA0A1W2PPD8 638 aa27.24■■□□□ 1.95
SPTSSA-201ENST00000298130 CAPN2P17655 700 aa27.24■■□□□ 1.95
SPTSSA-201ENST00000298130 CDK8P49336 464 aa27.24■■□□□ 1.95
SPTSSA-201ENST00000298130 C2orf54Q08AI8 447 aa27.24■■□□□ 1.95
SPTSSA-201ENST00000298130 LRRC41Q15345 812 aa27.24■■□□□ 1.95
SPTSSA-201ENST00000298130 FOXR1Q6PIV2 292 aa27.24■■□□□ 1.95
SPTSSA-201ENST00000298130 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.24■■□□□ 1.95
SPTSSA-201ENST00000298130 AMOTL1Q8IY63 956 aa27.24■■□□□ 1.95
SPTSSA-201ENST00000298130 CCDC155Q8N6L0 562 aa27.24■■□□□ 1.95
SPTSSA-201ENST00000298130 COA7Q96BR5 231 aa27.24■■□□□ 1.95
SPTSSA-201ENST00000298130 NYXQ9GZU5 481 aa27.24■■□□□ 1.95
SPTSSA-201ENST00000298130 ZNHIT6Q9NWK9 470 aaKnown RBP27.24■■□□□ 1.95
SPTSSA-201ENST00000298130 THRAP3Q9Y2W1 955 aaKnown RBP27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms