RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 GUCY2CP25092 1073 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 OAS2P29728 719 aaKnown RBP7.54□□□□□ -1.2
TMC1-201ENST00000297784 KIF23Q02241 960 aaPredicted RBP7.54□□□□□ -1.2
TMC1-201ENST00000297784 IFFO2Q5TF58 517 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 TTBK2Q6IQ55 1244 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 CCDC84Q86UT8 332 aaPredicted RBP7.54□□□□□ -1.2
TMC1-201ENST00000297784 REXO1L1PQ8IX06 675 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 DHX40Q8IX18 779 aaKnown RBP7.54□□□□□ -1.2
TMC1-201ENST00000297784 MSL3Q8N5Y2 521 aaKnown RBP7.54□□□□□ -1.2
TMC1-201ENST00000297784 ACER1Q8TDN7 264 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 OXER1Q8TDS5 423 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 PGBD1Q96JS3 809 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 BRCA2P51587 3418 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 GLTPD2A6NH11 291 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 MMP1P03956 469 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 IVLP07476 585 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 PFKFB3Q16875 520 aaPredicted RBP7.54□□□□□ -1.2
TMC1-201ENST00000297784 EARS2Q5JPH6 523 aaKnown RBP7.54□□□□□ -1.2
TMC1-201ENST00000297784 LRRN4CLQ8ND94 238 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 PHF20Q9BVI0 1012 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 UBA5Q9GZZ9 404 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 RIOX1Q9H6W3 641 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 ADARB2Q9NS39 739 aaKnown RBP7.54□□□□□ -1.2
TMC1-201ENST00000297784 VPS54Q9P1Q0 977 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 ZBTB21Q9ULJ3 1066 aa7.54□□□□□ -1.2
TMC1-201ENST00000297784 RRP15Q9Y3B9 282 aaKnown RBP7.54□□□□□ -1.2
TMC1-201ENST00000297784 PARP14Q460N5 1801 aa7.53□□□□□ -1.2
TMC1-201ENST00000297784 PARP1P09874 1014 aaKnown RBP7.53□□□□□ -1.2
TMC1-201ENST00000297784 KIF5BP33176 963 aa7.53□□□□□ -1.2
TMC1-201ENST00000297784 TNNI2P48788 182 aa7.53□□□□□ -1.2
TMC1-201ENST00000297784 ETF1P62495 437 aaKnown RBP7.53□□□□□ -1.2
TMC1-201ENST00000297784 ICA1Q05084 483 aa7.53□□□□□ -1.2
TMC1-201ENST00000297784 ZNF543Q08ER8 600 aa7.53□□□□□ -1.2
TMC1-201ENST00000297784 TNFAIP1Q13829 316 aa7.53□□□□□ -1.2
TMC1-201ENST00000297784 SMC1AQ14683 1233 aaKnown RBP7.53□□□□□ -1.2
TMC1-201ENST00000297784 NOM1Q5C9Z4 860 aaKnown RBP7.53□□□□□ -1.2
TMC1-201ENST00000297784 C11orf57Q6ZUT1 292 aaPredicted RBP7.53□□□□□ -1.2
TMC1-201ENST00000297784 KCTD1Q719H9 257 aa7.53□□□□□ -1.2
TMC1-201ENST00000297784 NCAPGQ9BPX3 1015 aa7.53□□□□□ -1.2
TMC1-201ENST00000297784 ANO10Q9NW15 660 aa7.53□□□□□ -1.2
TMC1-201ENST00000297784 TFIP11Q9UBB9 837 aaKnown RBP7.53□□□□□ -1.2
TMC1-201ENST00000297784 DNAI1Q9UI46 699 aa7.53□□□□□ -1.2
TMC1-201ENST00000297784 ZNF112Q9UJU3 913 aa7.53□□□□□ -1.2
TMC1-201ENST00000297784 BTBD18B2RXH4 712 aa7.53□□□□□ -1.2
TMC1-201ENST00000297784 F5H6K3 240 aa7.53□□□□□ -1.2
TMC1-201ENST00000297784 POLR3GO15318 223 aaPredicted RBP7.53□□□□□ -1.2
TMC1-201ENST00000297784 PPP1R11O60927 126 aaPredicted RBP7.53□□□□□ -1.2
TMC1-201ENST00000297784 ACTN2P35609 894 aa7.53□□□□□ -1.2
TMC1-201ENST00000297784 KLRC3Q07444 240 aa7.53□□□□□ -1.2
TMC1-201ENST00000297784 DGKZQ13574 1117 aa7.53□□□□□ -1.2
TMC1-201ENST00000297784 CC2D1AQ6P1N0 951 aaPredicted RBP7.53□□□□□ -1.2
TMC1-201ENST00000297784 CPLX2Q6PUV4 134 aaKnown RBP7.53□□□□□ -1.2
TMC1-201ENST00000297784 C10orf67Q8IYJ2 551 aa7.53□□□□□ -1.2
TMC1-201ENST00000297784 TRIM22Q8IYM9 498 aa7.53□□□□□ -1.2
TMC1-201ENST00000297784 GMCL1P1Q8NEA9 526 aa7.53□□□□□ -1.2
TMC1-201ENST00000297784 SPZ1Q9BXG8 430 aa7.53□□□□□ -1.2
TMC1-201ENST00000297784 ZSCAN16Q9H4T2 348 aaPredicted RBP7.53□□□□□ -1.2
TMC1-201ENST00000297784 LCMT1Q9UIC8 334 aa7.53□□□□□ -1.2
TMC1-201ENST00000297784 M0R2N6 131 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 TRIM66O15016 1216 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 NRDCO43847 1150 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 GRIN3BO60391 1043 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 SASH3O75995 380 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 SMARCA1P28370 1054 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 INPP5BP32019 993 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 SLC16A2P36021 539 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 MAGEA9P43362 315 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 TOB1P50616 345 aaPredicted RBP7.52□□□□□ -1.21
TMC1-201ENST00000297784 ATP2B2Q01814 1243 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 NR5A1Q13285 461 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 GPR161Q8N6U8 529 aaKnown RBP7.52□□□□□ -1.21
TMC1-201ENST00000297784 GPKOWQ92917 476 aaPredicted RBP eCLIP7.52□□□□□ -1.21
TMC1-201ENST00000297784 TNFRSF25Q93038 417 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 MYCBPQ99417 103 aaPredicted RBP7.52□□□□□ -1.21
TMC1-201ENST00000297784 NUP88Q99567 741 aaPredicted RBP7.52□□□□□ -1.21
TMC1-201ENST00000297784 BPIFA3Q9BQP9 254 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 JMJD4Q9H9V9 463 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 RLFQ13129 1914 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 PITPNM2Q9BZ72 1349 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 BECN2A8MW95 431 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 SCG2P13521 617 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 PSEN1P49768 467 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 WWC2Q6AWC2 1192 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 APOBEC3FQ8IUX4 373 aaKnown RBP7.52□□□□□ -1.21
TMC1-201ENST00000297784 ADGRF4Q8IZF3 695 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 BICD2Q8TD16 824 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 ZKSCAN4Q969J2 545 aaPredicted RBP7.52□□□□□ -1.21
TMC1-201ENST00000297784 MTMR8Q96EF0 704 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 USP28Q96RU2 1077 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 TMX2Q9Y320 296 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 PTPRFP10586 1907 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 FAM205CA6NFA0 338 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 ADM5C9JUS6 153 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 WNT7AO00755 349 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 NDUFB10O96000 172 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 POTEIP0CG38 1075 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 POTEJP0CG39 1038 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 JAKMIP3Q5VZ66 844 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 DPY19L2Q6NUT2 758 aa7.52□□□□□ -1.21
TMC1-201ENST00000297784 SPICE1Q8N0Z3 855 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms