RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 ACRBPQ8NEB7 543 aa17.45■□□□□ 0.38
UBAP1-201ENST00000297661 NAPGQ99747 312 aaPredicted RBP17.45■□□□□ 0.38
UBAP1-201ENST00000297661 RNF216Q9NWF9 866 aaPredicted RBP17.45■□□□□ 0.38
UBAP1-201ENST00000297661 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.45■□□□□ 0.38
UBAP1-201ENST00000297661 CEP83Q9Y592 693 aa17.45■□□□□ 0.38
UBAP1-201ENST00000297661 GYPCP04921 128 aa17.45■□□□□ 0.38
UBAP1-201ENST00000297661 SERPINB2P05120 415 aa17.45■□□□□ 0.38
UBAP1-201ENST00000297661 RIN2Q8WYP3 895 aaPredicted RBP17.45■□□□□ 0.38
UBAP1-201ENST00000297661 POLRMTO00411 1230 aaKnown RBP17.44■□□□□ 0.38
UBAP1-201ENST00000297661 HNRNPH1P31943 449 aaKnown RBP17.44■□□□□ 0.38
UBAP1-201ENST00000297661 CCT5P48643 541 aa17.44■□□□□ 0.38
UBAP1-201ENST00000297661 PPP2R5BQ15173 497 aa17.44■□□□□ 0.38
UBAP1-201ENST00000297661 KRT31Q15323 416 aa17.44■□□□□ 0.38
UBAP1-201ENST00000297661 GSDMAQ96QA5 445 aa17.44■□□□□ 0.38
UBAP1-201ENST00000297661 MTFR1LQ9H019 292 aa17.44■□□□□ 0.38
UBAP1-201ENST00000297661 CPVLQ9H3G5 476 aa17.44■□□□□ 0.38
UBAP1-201ENST00000297661 CLGNO14967 610 aa17.44■□□□□ 0.38
UBAP1-201ENST00000297661 N4BP3O15049 544 aa17.44■□□□□ 0.38
UBAP1-201ENST00000297661 DDAH1O94760 285 aa17.44■□□□□ 0.38
UBAP1-201ENST00000297661 CALM1P0DP23 149 aa17.44■□□□□ 0.38
UBAP1-201ENST00000297661 CALM2P0DP24 149 aa17.44■□□□□ 0.38
UBAP1-201ENST00000297661 CALM3P0DP25 149 aa17.44■□□□□ 0.38
UBAP1-201ENST00000297661 TM4SF1P30408 202 aa17.44■□□□□ 0.38
UBAP1-201ENST00000297661 HIBADHP31937 336 aaKnown RBP17.44■□□□□ 0.38
UBAP1-201ENST00000297661 SF3B3Q15393 1217 aaKnown RBP17.44■□□□□ 0.38
UBAP1-201ENST00000297661 TYW1BQ6NUM6 668 aa17.44■□□□□ 0.38
UBAP1-201ENST00000297661 FBXO33Q7Z6M2 555 aa17.44■□□□□ 0.38
UBAP1-201ENST00000297661 NAA15Q9BXJ9 866 aaKnown RBP17.44■□□□□ 0.38
UBAP1-201ENST00000297661 CRNKL1Q9BZJ0 848 aaKnown RBP17.44■□□□□ 0.38
UBAP1-201ENST00000297661 TRIM49BA6NDI0 452 aa17.43■□□□□ 0.38
UBAP1-201ENST00000297661 MFAP3LO75121 409 aa17.43■□□□□ 0.38
UBAP1-201ENST00000297661 RPS8P62241 208 aaKnown RBP17.43■□□□□ 0.38
UBAP1-201ENST00000297661 TFAP4Q01664 338 aa17.43■□□□□ 0.38
UBAP1-201ENST00000297661 FBXW10Q5XX13 1052 aa17.43■□□□□ 0.38
UBAP1-201ENST00000297661 NCAPH2Q6IBW4 605 aa17.43■□□□□ 0.38
UBAP1-201ENST00000297661 RCSD1Q6JBY9 416 aa17.43■□□□□ 0.38
UBAP1-201ENST00000297661 PDXDC2PQ6P474 469 aa17.43■□□□□ 0.38
UBAP1-201ENST00000297661 GPR101Q96P66 508 aaPredicted RBP17.43■□□□□ 0.38
UBAP1-201ENST00000297661 HPCAL4Q9UM19 191 aa17.43■□□□□ 0.38
UBAP1-201ENST00000297661 FAM169AQ9Y6X4 670 aa17.43■□□□□ 0.38
UBAP1-201ENST00000297661 USP17L3A6NCW0 530 aa17.43■□□□□ 0.38
UBAP1-201ENST00000297661 USP17L4A6NCW7 530 aa17.43■□□□□ 0.38
UBAP1-201ENST00000297661 MYCNP04198 464 aaPredicted RBP17.43■□□□□ 0.38
UBAP1-201ENST00000297661 PBX1P40424 430 aa17.43■□□□□ 0.38
UBAP1-201ENST00000297661 CLEC4GQ6UXB4 293 aa17.43■□□□□ 0.38
UBAP1-201ENST00000297661 USP17L1Q7RTZ2 530 aa17.43■□□□□ 0.38
UBAP1-201ENST00000297661 SLC44A5Q8NCS7 719 aa17.43■□□□□ 0.38
UBAP1-201ENST00000297661 PES1O00541 588 aaKnown RBP17.42■□□□□ 0.38
UBAP1-201ENST00000297661 FGRP09769 529 aa17.42■□□□□ 0.38
UBAP1-201ENST00000297661 PFKFB3Q16875 520 aaPredicted RBP17.42■□□□□ 0.38
UBAP1-201ENST00000297661 KCNV1Q6PIU1 500 aa17.42■□□□□ 0.38
UBAP1-201ENST00000297661 RASSF8Q8NHQ8 419 aa17.42■□□□□ 0.38
UBAP1-201ENST00000297661 EBAG9O00559 213 aa17.42■□□□□ 0.38
UBAP1-201ENST00000297661 PTGER2P43116 358 aa17.42■□□□□ 0.38
UBAP1-201ENST00000297661 FILIP1LQ4L180 1135 aa17.42■□□□□ 0.38
UBAP1-201ENST00000297661 CCDC148Q8NFR7 591 aa17.42■□□□□ 0.38
UBAP1-201ENST00000297661 NELFBQ8WX92 580 aa17.42■□□□□ 0.38
UBAP1-201ENST00000297661 IL17RBQ9NRM6 502 aa17.42■□□□□ 0.38
UBAP1-201ENST00000297661 SCN7AQ01118 1682 aa17.42■□□□□ 0.38
UBAP1-201ENST00000297661 SHOX2O60902 331 aaPredicted RBP17.41■□□□□ 0.38
UBAP1-201ENST00000297661 GOLGA8HP0CJ92 632 aa17.41■□□□□ 0.38
UBAP1-201ENST00000297661 DIXDC1Q155Q3 683 aa17.41■□□□□ 0.38
UBAP1-201ENST00000297661 GRIK5Q16478 980 aa17.41■□□□□ 0.38
UBAP1-201ENST00000297661 BANK1Q8NDB2 785 aa17.41■□□□□ 0.38
UBAP1-201ENST00000297661 KAT14Q9H8E8 782 aa17.41■□□□□ 0.38
UBAP1-201ENST00000297661 DONSONQ9NYP3 566 aa17.41■□□□□ 0.38
UBAP1-201ENST00000297661 MYO6Q9UM54 1294 aa17.41■□□□□ 0.38
UBAP1-201ENST00000297661 ZC3H4Q9UPT8 1303 aaKnown RBP17.41■□□□□ 0.38
UBAP1-201ENST00000297661 PRR5LQ6MZQ0 368 aa17.41■□□□□ 0.38
UBAP1-201ENST00000297661 EP400NLQ6ZTU2 488 aa17.41■□□□□ 0.38
UBAP1-201ENST00000297661 DZIP1Q86YF9 867 aaKnown RBP17.41■□□□□ 0.38
UBAP1-201ENST00000297661 GDAP1L1Q96MZ0 367 aa17.41■□□□□ 0.38
UBAP1-201ENST00000297661 NUP88Q99567 741 aaPredicted RBP17.41■□□□□ 0.38
UBAP1-201ENST00000297661 TTF2Q9UNY4 1162 aaKnown RBP17.41■□□□□ 0.38
UBAP1-201ENST00000297661 CASZ1Q86V15 1759 aa17.41■□□□□ 0.38
UBAP1-201ENST00000297661 ERVK-24P63145 666 aa17.41■□□□□ 0.38
UBAP1-201ENST00000297661 CNBD1Q8NA66 436 aa17.41■□□□□ 0.38
UBAP1-201ENST00000297661 TMEM60Q9H2L4 133 aa17.41■□□□□ 0.38
UBAP1-201ENST00000297661 SPON1Q9HCB6 807 aa17.41■□□□□ 0.38
UBAP1-201ENST00000297661 ORC4O43929 436 aa17.4■□□□□ 0.38
UBAP1-201ENST00000297661 BMP15O95972 392 aa17.4■□□□□ 0.38
UBAP1-201ENST00000297661 HMGB2P26583 209 aaKnown RBP17.4■□□□□ 0.38
UBAP1-201ENST00000297661 GGCXP38435 758 aa17.4■□□□□ 0.38
UBAP1-201ENST00000297661 USP8P40818 1118 aa17.4■□□□□ 0.38
UBAP1-201ENST00000297661 STAT6P42226 847 aa17.4■□□□□ 0.38
UBAP1-201ENST00000297661 PRCPP42785 496 aa17.4■□□□□ 0.38
UBAP1-201ENST00000297661 PAK1Q13153 545 aa17.4■□□□□ 0.38
UBAP1-201ENST00000297661 STIM1Q13586 685 aa17.4■□□□□ 0.38
UBAP1-201ENST00000297661 COG1Q8WTW3 980 aa17.4■□□□□ 0.38
UBAP1-201ENST00000297661 SAP30BPQ9UHR5 308 aaKnown RBP17.4■□□□□ 0.38
UBAP1-201ENST00000297661 TFR2Q9UP52 801 aa17.4■□□□□ 0.38
UBAP1-201ENST00000297661 KCNJ18B7U540 433 aa17.4■□□□□ 0.38
UBAP1-201ENST00000297661 RPN1P04843 607 aaKnown RBP17.4■□□□□ 0.38
UBAP1-201ENST00000297661 IRAK1P51617 712 aa17.4■□□□□ 0.38
UBAP1-201ENST00000297661 PMS1P54277 932 aaKnown RBP17.4■□□□□ 0.38
UBAP1-201ENST00000297661 AMPD2Q01433 879 aa17.4■□□□□ 0.38
UBAP1-201ENST00000297661 KCNJ12Q14500 433 aa17.4■□□□□ 0.38
UBAP1-201ENST00000297661 INF2Q27J81 1249 aa17.4■□□□□ 0.38
UBAP1-201ENST00000297661 SLC35G1Q2M3R5 365 aa17.4■□□□□ 0.38
UBAP1-201ENST00000297661 MAP9Q49MG5 647 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms