RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 CASZ1Q86V15 1759 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 NCOR1O75376 2440 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 CTNND1O60716 968 aaKnown RBP5.27□□□□□ -1.57
CSMD3-201ENST00000297405 GOLGA8FQ08AF8 430 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 GOLGA8DPQ0D2H9 430 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 THOC7Q6I9Y2 204 aaKnown RBP5.27□□□□□ -1.57
CSMD3-201ENST00000297405 PRPF40BQ6NWY9 871 aaKnown RBP5.27□□□□□ -1.57
CSMD3-201ENST00000297405 PBKQ96KB5 322 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 CSRNP1Q96S65 589 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 MLPHQ9BV36 600 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-201ENST00000297405 RMI1Q9H9A7 625 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 ATP11BQ9Y2G3 1177 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 STK38LQ9Y2H1 464 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 SNX5Q9Y5X3 404 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 NUP160Q12769 1436 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 NR1D1P20393 614 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 CCT5P48643 541 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 LRRC8EQ6NSJ5 796 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 PM20D2Q8IYS1 436 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 EDEM3Q9BZQ6 932 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 NUTM2FA1L443 756 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 MAP3K13O43283 966 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 CTTNQ14247 550 aaKnown RBP5.27□□□□□ -1.57
CSMD3-201ENST00000297405 CASP8Q14790 479 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 TAB1Q15750 504 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 PRR23CQ6ZRP0 262 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 TRMT44Q8IYL2 757 aaKnown RBP5.27□□□□□ -1.57
CSMD3-201ENST00000297405 OR8K1Q8NGG5 319 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 CEP70Q8NHQ1 597 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 ZFRQ96KR1 1074 aaKnown RBP5.27□□□□□ -1.57
CSMD3-201ENST00000297405 IFT122Q9HBG6 1241 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 ADGRA3Q8IWK6 1321 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 KIF24Q5T7B8 1368 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 CCDC188H7C350 402 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 N4BP1O75113 896 aaKnown RBP5.27□□□□□ -1.57
CSMD3-201ENST00000297405 HMOX1P09601 288 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 EPB41P11171 864 aaKnown RBP5.27□□□□□ -1.57
CSMD3-201ENST00000297405 LMOD1P29536 600 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-201ENST00000297405 AP1S2P56377 157 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 FBXL5Q9UKA1 691 aa5.27□□□□□ -1.57
CSMD3-201ENST00000297405 KRT14P02533 472 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 PLCB3Q01970 1234 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 NUGGCQ68CJ6 796 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 CC2D2BQ6DHV5 1058 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 CENPUQ71F23 418 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 ZNF713Q8N859 430 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-201ENST00000297405 FMO2Q99518 471 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 THUMPD2Q9BTF0 503 aaKnown RBP5.26□□□□□ -1.57
CSMD3-201ENST00000297405 PPANQ9NQ55 473 aaKnown RBP5.26□□□□□ -1.57
CSMD3-201ENST00000297405 TLDC2A0PJX2 215 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 GSNP06396 782 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 NSFP46459 744 aaKnown RBP5.26□□□□□ -1.57
CSMD3-201ENST00000297405 METAP2P50579 478 aaKnown RBP eCLIP5.26□□□□□ -1.57
CSMD3-201ENST00000297405 YWHAEP62258 255 aaKnown RBP5.26□□□□□ -1.57
CSMD3-201ENST00000297405 GIMAP6Q6P9H5 292 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 AACSQ86V21 672 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 ETAA1Q9NY74 926 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 AMFRQ9UKV5 643 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 TTC22Q5TAA0 569 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 PARP9Q8IXQ6 854 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 FAM135BQ49AJ0 1406 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 PNMA6AP0CW24 399 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-201ENST00000297405 EEF1B2P24534 225 aaKnown RBP5.26□□□□□ -1.57
CSMD3-201ENST00000297405 ARL1P40616 181 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-201ENST00000297405 NCBP1Q09161 790 aaKnown RBP5.26□□□□□ -1.57
CSMD3-201ENST00000297405 HDDC2Q7Z4H3 204 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 TMX3Q96JJ7 454 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 KRT12Q99456 494 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 MEIS1O00470 390 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 ARHGAP44Q17R89 818 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 MMEL1Q495T6 779 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 GIPC2Q8TF65 315 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 HPS1Q92902 700 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 LZTS2Q9BRK4 669 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 CARD9Q9H257 536 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 GARSP41250 739 aaKnown RBP5.26□□□□□ -1.57
CSMD3-201ENST00000297405 STAT2P52630 851 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 PDZD4Q76G19 769 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-201ENST00000297405 RNF169Q8NCN4 708 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 SNUPNO95149 360 aaKnown RBP5.26□□□□□ -1.57
CSMD3-201ENST00000297405 MDM2Q00987 491 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-201ENST00000297405 LUZP2Q86TE4 346 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 PIK3R5Q8WYR1 880 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 COQ7Q99807 217 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 ASIC3Q9UHC3 531 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 LONRF2Q1L5Z9 754 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 KANK4Q5T7N3 995 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-201ENST00000297405 FOXP3Q9BZS1 431 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 CAPN1P07384 714 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 ADSLP30566 484 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-201ENST00000297405 KAZNQ674X7 775 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 PANK2Q9BZ23 570 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 PARVAQ9NVD7 372 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 TLK1Q9UKI8 766 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 CCDC22O60826 627 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 ABCB1P08183 1280 aaPredicted RBP5.26□□□□□ -1.57
CSMD3-201ENST00000297405 HSPA1AP0DMV8 641 aaKnown RBP5.26□□□□□ -1.57
CSMD3-201ENST00000297405 HSPA1BP0DMV9 641 aaKnown RBP5.26□□□□□ -1.57
CSMD3-201ENST00000297405 MFSD4BQ5TF39 518 aa5.26□□□□□ -1.57
CSMD3-201ENST00000297405 CCDC127Q96BQ5 260 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms