RNA–Protein interactions for RNA: ENST00000296088.11

SNRK-201, Transcript of SNF related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRK, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRK-201ENST00000296088 ECEL1O95672 775 aa13.54□□□□□ -0.24
SNRK-201ENST00000296088 ADKP55263 362 aaKnown RBP13.54□□□□□ -0.24
SNRK-201ENST00000296088 ARHGAP44Q17R89 818 aa13.54□□□□□ -0.24
SNRK-201ENST00000296088 GRAMD1BQ3KR37 738 aa13.54□□□□□ -0.24
SNRK-201ENST00000296088 LONRF3Q496Y0 759 aa13.54□□□□□ -0.24
SNRK-201ENST00000296088 TPTE2Q6XPS3 522 aa13.54□□□□□ -0.24
SNRK-201ENST00000296088 TRIM55Q9BYV6 548 aa13.54□□□□□ -0.24
SNRK-201ENST00000296088 POLKQ9UBT6 870 aa13.54□□□□□ -0.24
SNRK-201ENST00000296088 LCMT1Q9UIC8 334 aa13.54□□□□□ -0.24
SNRK-201ENST00000296088 DIS3Q9Y2L1 958 aaKnown RBP13.54□□□□□ -0.24
SNRK-201ENST00000296088 IQANK1A0A1B0GTG1 560 aa13.53□□□□□ -0.24
SNRK-201ENST00000296088 FAM133BQ5BKY9 247 aaKnown RBP13.53□□□□□ -0.24
SNRK-201ENST00000296088 GPHNQ9NQX3 736 aaPredicted RBP13.53□□□□□ -0.24
SNRK-201ENST00000296088 MAPK8IP1Q9UQF2 711 aa13.53□□□□□ -0.24
SNRK-201ENST00000296088 ZBTB12Q9Y330 459 aaPredicted RBP13.53□□□□□ -0.24
SNRK-201ENST00000296088 SNX14Q9Y5W7 946 aa13.53□□□□□ -0.24
SNRK-201ENST00000296088 PARD3Q8TEW0 1356 aa13.53□□□□□ -0.24
SNRK-201ENST00000296088 LPXNO60711 386 aa13.53□□□□□ -0.24
SNRK-201ENST00000296088 KRT39Q6A163 491 aa13.53□□□□□ -0.24
SNRK-201ENST00000296088 MAGOHBQ96A72 148 aaKnown RBP13.53□□□□□ -0.24
SNRK-201ENST00000296088 ZBTB18Q99592 522 aa13.53□□□□□ -0.24
SNRK-201ENST00000296088 KIF9Q9HAQ2 790 aa13.53□□□□□ -0.24
SNRK-201ENST00000296088 TTLL3Q9Y4R7 772 aa13.53□□□□□ -0.24
SNRK-201ENST00000296088 A6NJR5 290 aa13.53□□□□□ -0.24
SNRK-201ENST00000296088 SYCE1LA8MT33 242 aa13.53□□□□□ -0.24
SNRK-201ENST00000296088 MYO1FO00160 1098 aa13.53□□□□□ -0.24
SNRK-201ENST00000296088 MBD4O95243 580 aa13.53□□□□□ -0.24
SNRK-201ENST00000296088 NR1D1P20393 614 aa13.53□□□□□ -0.24
SNRK-201ENST00000296088 C17orf53Q8N3J3 647 aaPredicted RBP13.53□□□□□ -0.24
SNRK-201ENST00000296088 SYT2Q8N9I0 419 aaPredicted RBP13.53□□□□□ -0.24
SNRK-201ENST00000296088 FBXO18Q8NFZ0 1043 aa13.53□□□□□ -0.24
SNRK-201ENST00000296088 ZBTB9Q96C00 473 aa13.53□□□□□ -0.24
SNRK-201ENST00000296088 POLR3AO14802 1390 aaPredicted RBP13.53□□□□□ -0.24
SNRK-201ENST00000296088 CAPN9O14815 690 aa13.53□□□□□ -0.24
SNRK-201ENST00000296088 MCF2LO15068 1137 aa13.53□□□□□ -0.24
SNRK-201ENST00000296088 NVLO15381 856 aaKnown RBP13.53□□□□□ -0.24
SNRK-201ENST00000296088 TTLL7Q6ZT98 887 aa13.53□□□□□ -0.24
SNRK-201ENST00000296088 SLFN12Q8IYM2 578 aa13.53□□□□□ -0.24
SNRK-201ENST00000296088 ATP6V1E2Q96A05 226 aa13.53□□□□□ -0.24
SNRK-201ENST00000296088 SGSM2O43147 1006 aa13.52□□□□□ -0.24
SNRK-201ENST00000296088 RWDD2BP57060 319 aa13.52□□□□□ -0.24
SNRK-201ENST00000296088 WDR75Q8IWA0 830 aaKnown RBP13.52□□□□□ -0.24
SNRK-201ENST00000296088 STX19Q8N4C7 294 aa13.52□□□□□ -0.24
SNRK-201ENST00000296088 ZNF274Q96GC6 653 aaPredicted RBP13.52□□□□□ -0.24
SNRK-201ENST00000296088 NOD1Q9Y239 953 aa13.52□□□□□ -0.24
SNRK-201ENST00000296088 ZBBXA8MT70 800 aa13.52□□□□□ -0.24
SNRK-201ENST00000296088 IKBKBO14920 756 aa13.52□□□□□ -0.24
SNRK-201ENST00000296088 CPP00450 1065 aa13.52□□□□□ -0.24
SNRK-201ENST00000296088 NNTQ13423 1086 aa13.52□□□□□ -0.24
SNRK-201ENST00000296088 MYSM1Q5VVJ2 828 aa13.52□□□□□ -0.24
SNRK-201ENST00000296088 RAPH1Q70E73 1250 aa13.52□□□□□ -0.24
SNRK-201ENST00000296088 NLRX1Q86UT6 975 aa13.52□□□□□ -0.24
SNRK-201ENST00000296088 ZBTB8OSQ8IWT0 167 aa13.52□□□□□ -0.24
SNRK-201ENST00000296088 RASSF10A6NK89 507 aa13.52□□□□□ -0.25
SNRK-201ENST00000296088 HEXIM1O94992 359 aaKnown RBP13.52□□□□□ -0.25
SNRK-201ENST00000296088 IFNAR2P48551 515 aa13.52□□□□□ -0.25
SNRK-201ENST00000296088 YARSP54577 528 aaKnown RBP13.52□□□□□ -0.25
SNRK-201ENST00000296088 TCP11X2Q5H9J9 407 aa13.52□□□□□ -0.25
SNRK-201ENST00000296088 REXO1Q8N1G1 1221 aaKnown RBP13.52□□□□□ -0.25
SNRK-201ENST00000296088 COL4A3BPQ9Y5P4 624 aa13.52□□□□□ -0.25
SNRK-201ENST00000296088 MRFAP1Q9Y605 127 aa13.52□□□□□ -0.25
SNRK-201ENST00000296088 A0A1W2PQ27 194 aa13.52□□□□□ -0.25
SNRK-201ENST00000296088 A0A1W2PQ64 194 aa13.52□□□□□ -0.25
SNRK-201ENST00000296088 A0A1W2PQD8 194 aa13.52□□□□□ -0.25
SNRK-201ENST00000296088 POC1B-GALNT4F8VUJ3 575 aa13.52□□□□□ -0.25
SNRK-201ENST00000296088 GOLGA8MH3BSY2 632 aa13.52□□□□□ -0.25
SNRK-201ENST00000296088 MYL1P05976 194 aa13.52□□□□□ -0.25
SNRK-201ENST00000296088 CASP2P42575 452 aa13.52□□□□□ -0.25
SNRK-201ENST00000296088 NBPF20Q3BBV1 942 aa13.52□□□□□ -0.25
SNRK-201ENST00000296088 CHST3Q7LGC8 479 aa13.52□□□□□ -0.25
SNRK-201ENST00000296088 DHX38Q92620 1227 aaKnown RBP13.52□□□□□ -0.25
SNRK-201ENST00000296088 SUN2Q9UH99 717 aa13.52□□□□□ -0.25
SNRK-201ENST00000296088 TOP2BQ02880 1626 aa13.51□□□□□ -0.25
SNRK-201ENST00000296088 PTPN23Q9H3S7 1636 aa13.51□□□□□ -0.25
SNRK-201ENST00000296088 SPDYE16A6NNV3 312 aaPredicted RBP13.51□□□□□ -0.25
SNRK-201ENST00000296088 H7C0C1 242 aa13.51□□□□□ -0.25
SNRK-201ENST00000296088 ESRRBO95718 433 aa13.51□□□□□ -0.25
SNRK-201ENST00000296088 KRT19P08727 400 aa13.51□□□□□ -0.25
SNRK-201ENST00000296088 ABCB4P21439 1286 aa13.51□□□□□ -0.25
SNRK-201ENST00000296088 ATP5OP48047 213 aa13.51□□□□□ -0.25
SNRK-201ENST00000296088 PTK2Q05397 1052 aa13.51□□□□□ -0.25
SNRK-201ENST00000296088 GRIN1Q05586 938 aa13.51□□□□□ -0.25
SNRK-201ENST00000296088 SPDYE2Q495Y8 402 aa13.51□□□□□ -0.25
SNRK-201ENST00000296088 TDRD7Q8NHU6 1098 aaKnown RBP13.51□□□□□ -0.25
SNRK-201ENST00000296088 NUDCD1Q96RS6 583 aa13.51□□□□□ -0.25
SNRK-201ENST00000296088 ING2Q9H160 280 aa13.51□□□□□ -0.25
SNRK-201ENST00000296088 STMN3Q9NZ72 180 aa13.51□□□□□ -0.25
SNRK-201ENST00000296088 WARS2Q9UGM6 360 aaKnown RBP13.51□□□□□ -0.25
SNRK-201ENST00000296088 DBNLQ9UJU6 430 aaKnown RBP13.51□□□□□ -0.25
SNRK-201ENST00000296088 PPARGP37231 505 aaPredicted RBP13.51□□□□□ -0.25
SNRK-201ENST00000296088 MFAP3P55082 362 aa13.51□□□□□ -0.25
SNRK-201ENST00000296088 KLC3Q6P597 504 aa13.51□□□□□ -0.25
SNRK-201ENST00000296088 GAS2L3Q86XJ1 694 aa13.51□□□□□ -0.25
SNRK-201ENST00000296088 APLFQ8IW19 511 aaPredicted RBP13.51□□□□□ -0.25
SNRK-201ENST00000296088 USHBP1Q8N6Y0 703 aa13.51□□□□□ -0.25
SNRK-201ENST00000296088 DSCC1Q9BVC3 393 aa13.51□□□□□ -0.25
SNRK-201ENST00000296088 TRIM45Q9H8W5 580 aaPredicted RBP13.51□□□□□ -0.25
SNRK-201ENST00000296088 SUPT6HQ7KZ85 1726 aaKnown RBP13.51□□□□□ -0.25
SNRK-201ENST00000296088 DEPTORQ8TB45 409 aa13.51□□□□□ -0.25
SNRK-201ENST00000296088 CCDC188H7C350 402 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms