RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 SLURP2P0DP57 97 aa19.08■□□□□ 0.65
CPSF4-201ENST00000292476 TRAF1Q13077 416 aa19.08■□□□□ 0.65
CPSF4-201ENST00000292476 WWC2Q6AWC2 1192 aa19.08■□□□□ 0.65
CPSF4-201ENST00000292476 PPP1R18Q6NYC8 613 aa19.08■□□□□ 0.65
CPSF4-201ENST00000292476 SIAH1Q8IUQ4 282 aa19.08■□□□□ 0.65
CPSF4-201ENST00000292476 UBA5Q9GZZ9 404 aa19.08■□□□□ 0.65
CPSF4-201ENST00000292476 TUBE1Q9UJT0 475 aa19.08■□□□□ 0.65
CPSF4-201ENST00000292476 TMX2Q9Y320 296 aa19.08■□□□□ 0.65
CPSF4-201ENST00000292476 STXBP3O00186 592 aa19.08■□□□□ 0.64
CPSF4-201ENST00000292476 SYKP43405 635 aa19.08■□□□□ 0.64
CPSF4-201ENST00000292476 NAPAP54920 295 aa19.08■□□□□ 0.64
CPSF4-201ENST00000292476 LRMPQ12912 555 aa19.08■□□□□ 0.64
CPSF4-201ENST00000292476 NR5A1Q13285 461 aa19.08■□□□□ 0.64
CPSF4-201ENST00000292476 CCDC144BQ3MJ40 725 aa19.08■□□□□ 0.64
CPSF4-201ENST00000292476 RESP18Q5W5W9 173 aa19.08■□□□□ 0.64
CPSF4-201ENST00000292476 MIGA2Q7L4E1 593 aa19.08■□□□□ 0.64
CPSF4-201ENST00000292476 HOMER1Q86YM7 354 aa19.08■□□□□ 0.64
CPSF4-201ENST00000292476 UBE2Q2Q8WVN8 375 aa19.08■□□□□ 0.64
CPSF4-201ENST00000292476 ZMYND12Q9H0C1 365 aa19.08■□□□□ 0.64
CPSF4-201ENST00000292476 GLT8D2Q9H1C3 349 aa19.08■□□□□ 0.64
CPSF4-201ENST00000292476 VAT1LQ9HCJ6 419 aa19.08■□□□□ 0.64
CPSF4-201ENST00000292476 RAD21O60216 631 aa19.07■□□□□ 0.64
CPSF4-201ENST00000292476 CTNND1O60716 968 aaKnown RBP19.07■□□□□ 0.64
CPSF4-201ENST00000292476 BMP3P12645 472 aa19.07■□□□□ 0.64
CPSF4-201ENST00000292476 ADGRF4Q8IZF3 695 aa19.07■□□□□ 0.64
CPSF4-201ENST00000292476 OXER1Q8TDS5 423 aa19.07■□□□□ 0.64
CPSF4-201ENST00000292476 PIGSQ96S52 555 aa19.07■□□□□ 0.64
CPSF4-201ENST00000292476 PAXBP1Q9Y5B6 917 aa19.07■□□□□ 0.64
CPSF4-201ENST00000292476 TRIM75PA6NK02 468 aa19.06■□□□□ 0.64
CPSF4-201ENST00000292476 ZBTB5O15062 677 aa19.06■□□□□ 0.64
CPSF4-201ENST00000292476 SYCP1Q15431 976 aa19.06■□□□□ 0.64
CPSF4-201ENST00000292476 SLC35G1Q2M3R5 365 aa19.06■□□□□ 0.64
CPSF4-201ENST00000292476 DPCR1Q3MIW9 517 aa19.06■□□□□ 0.64
CPSF4-201ENST00000292476 PAXIP1Q6ZW49 1069 aaPredicted RBP19.06■□□□□ 0.64
CPSF4-201ENST00000292476 GPKOWQ92917 476 aaPredicted RBP eCLIP19.06■□□□□ 0.64
CPSF4-201ENST00000292476 TNFRSF25Q93038 417 aa19.06■□□□□ 0.64
CPSF4-201ENST00000292476 ZNF341Q9BYN7 854 aa19.06■□□□□ 0.64
CPSF4-201ENST00000292476 GBA2Q9HCG7 927 aaPredicted RBP19.06■□□□□ 0.64
CPSF4-201ENST00000292476 TLL2Q9Y6L7 1015 aa19.06■□□□□ 0.64
CPSF4-201ENST00000292476 NDUFB10O96000 172 aa19.05■□□□□ 0.64
CPSF4-201ENST00000292476 KCNJ6P48051 423 aa19.05■□□□□ 0.64
CPSF4-201ENST00000292476 RBM10P98175 930 aaKnown RBP19.05■□□□□ 0.64
CPSF4-201ENST00000292476 RRP1BQ14684 758 aaKnown RBP19.05■□□□□ 0.64
CPSF4-201ENST00000292476 NPY5RQ15761 445 aa19.05■□□□□ 0.64
CPSF4-201ENST00000292476 DEFB115Q30KQ5 88 aa19.05■□□□□ 0.64
CPSF4-201ENST00000292476 SUPT20HL1Q3ZLR7 823 aa19.05■□□□□ 0.64
CPSF4-201ENST00000292476 SAPCD2Q86UD0 394 aa19.05■□□□□ 0.64
CPSF4-201ENST00000292476 MTMR8Q96EF0 704 aa19.05■□□□□ 0.64
CPSF4-201ENST00000292476 JMJD4Q9H9V9 463 aa19.05■□□□□ 0.64
CPSF4-201ENST00000292476 CCDC194A0A1B0GVG4 234 aa19.05■□□□□ 0.64
CPSF4-201ENST00000292476 RASSF10A6NK89 507 aa19.05■□□□□ 0.64
CPSF4-201ENST00000292476 PHF20L1A8MW92 1017 aa19.05■□□□□ 0.64
CPSF4-201ENST00000292476 CTIFO43310 598 aaKnown RBP19.05■□□□□ 0.64
CPSF4-201ENST00000292476 GRM1Q13255 1194 aa19.05■□□□□ 0.64
CPSF4-201ENST00000292476 KCTD1Q719H9 257 aa19.05■□□□□ 0.64
CPSF4-201ENST00000292476 C2orf69Q8N8R5 385 aa19.05■□□□□ 0.64
CPSF4-201ENST00000292476 CCDC150Q8NCX0 1101 aa19.05■□□□□ 0.64
CPSF4-201ENST00000292476 SHISA4Q96DD7 197 aa19.05■□□□□ 0.64
CPSF4-201ENST00000292476 HOOK1Q9UJC3 728 aaKnown RBP19.05■□□□□ 0.64
CPSF4-201ENST00000292476 SMCO2A6NFE2 343 aa19.04■□□□□ 0.64
CPSF4-201ENST00000292476 TOB1P50616 345 aaPredicted RBP19.04■□□□□ 0.64
CPSF4-201ENST00000292476 JAG1P78504 1218 aa19.04■□□□□ 0.64
CPSF4-201ENST00000292476 SHC4Q6S5L8 630 aa19.04■□□□□ 0.64
CPSF4-201ENST00000292476 BTNL9Q6UXG8 535 aa19.04■□□□□ 0.64
CPSF4-201ENST00000292476 RASGRP2Q7LDG7 609 aa19.04■□□□□ 0.64
CPSF4-201ENST00000292476 KRT25Q7Z3Z0 450 aa19.04■□□□□ 0.64
CPSF4-201ENST00000292476 TEX2Q8IWB9 1127 aa19.04■□□□□ 0.64
CPSF4-201ENST00000292476 KRI1Q8N9T8 703 aaKnown RBP19.04■□□□□ 0.64
CPSF4-201ENST00000292476 MARCKSP29966 332 aaPredicted RBP19.03■□□□□ 0.64
CPSF4-201ENST00000292476 HUNKP57058 714 aa19.03■□□□□ 0.64
CPSF4-201ENST00000292476 IKQ13123 557 aaPredicted RBP19.03■□□□□ 0.64
CPSF4-201ENST00000292476 SHROOM1Q2M3G4 852 aaPredicted RBP19.03■□□□□ 0.64
CPSF4-201ENST00000292476 CDAN1Q8IWY9 1227 aa19.03■□□□□ 0.64
CPSF4-201ENST00000292476 CHURC1Q8WUH1 139 aa19.03■□□□□ 0.64
CPSF4-201ENST00000292476 CPVLQ9H3G5 476 aa19.03■□□□□ 0.64
CPSF4-201ENST00000292476 VCPKMTQ9H867 229 aa19.03■□□□□ 0.64
CPSF4-201ENST00000292476 A0A1W2PRG0 241 aa19.02■□□□□ 0.64
CPSF4-201ENST00000292476 KIF2AO00139 706 aaPredicted RBP19.02■□□□□ 0.64
CPSF4-201ENST00000292476 RIOK3O14730 519 aaKnown RBP19.02■□□□□ 0.64
CPSF4-201ENST00000292476 PLA2G6O60733 806 aa19.02■□□□□ 0.64
CPSF4-201ENST00000292476 VEGFBP49765 207 aa19.02■□□□□ 0.64
CPSF4-201ENST00000292476 CCZ1BP86790 482 aa19.02■□□□□ 0.64
CPSF4-201ENST00000292476 CCZ1P86791 482 aaPredicted RBP19.02■□□□□ 0.64
CPSF4-201ENST00000292476 PRKG1Q13976 671 aa19.02■□□□□ 0.64
CPSF4-201ENST00000292476 NCAPHQ15003 741 aa19.02■□□□□ 0.64
CPSF4-201ENST00000292476 MCTP2Q6DN12 878 aa19.02■□□□□ 0.64
CPSF4-201ENST00000292476 TTBK2Q6IQ55 1244 aa19.02■□□□□ 0.64
CPSF4-201ENST00000292476 PIK3AP1Q6ZUJ8 805 aa19.02■□□□□ 0.64
CPSF4-201ENST00000292476 MOB2Q70IA6 237 aa19.02■□□□□ 0.64
CPSF4-201ENST00000292476 ZNF579Q8NAF0 562 aaKnown RBP19.02■□□□□ 0.64
CPSF4-201ENST00000292476 M0R2N6 131 aa19.01■□□□□ 0.63
CPSF4-201ENST00000292476 SKILP12757 684 aa19.01■□□□□ 0.63
CPSF4-201ENST00000292476 TNNT1P13805 278 aa19.01■□□□□ 0.63
CPSF4-201ENST00000292476 NF2P35240 595 aa19.01■□□□□ 0.63
CPSF4-201ENST00000292476 ADCY7P51828 1080 aa19.01■□□□□ 0.63
CPSF4-201ENST00000292476 STAT2P52630 851 aa19.01■□□□□ 0.63
CPSF4-201ENST00000292476 MRPL12P52815 198 aaKnown RBP19.01■□□□□ 0.63
CPSF4-201ENST00000292476 TTLL12Q14166 644 aaPredicted RBP19.01■□□□□ 0.63
CPSF4-201ENST00000292476 TTC38Q5R3I4 469 aa19.01■□□□□ 0.63
CPSF4-201ENST00000292476 CYP4F22Q6NT55 531 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms