RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 DUSP11O75319 330 aaKnown RBP11.23□□□□□ -0.61
HMHB1-201ENST00000289448 SNHG28P0DPA3 235 aa11.23□□□□□ -0.61
HMHB1-201ENST00000289448 PCP11498 1178 aaKnown RBP11.23□□□□□ -0.61
HMHB1-201ENST00000289448 ACLYP53396 1101 aa11.23□□□□□ -0.61
HMHB1-201ENST00000289448 ZNF543Q08ER8 600 aa11.23□□□□□ -0.61
HMHB1-201ENST00000289448 TTC14Q96N46 770 aa11.23□□□□□ -0.61
HMHB1-201ENST00000289448 TSEN34Q9BSV6 310 aaKnown RBP11.23□□□□□ -0.61
HMHB1-201ENST00000289448 UPF3AQ9H1J1 476 aaKnown RBP11.23□□□□□ -0.61
HMHB1-201ENST00000289448 PRDM5Q9NQX1 630 aaPredicted RBP11.23□□□□□ -0.61
HMHB1-201ENST00000289448 HIP1O00291 1037 aa11.22□□□□□ -0.61
HMHB1-201ENST00000289448 NFIBO00712 420 aa11.22□□□□□ -0.61
HMHB1-201ENST00000289448 KDM4AO75164 1064 aa11.22□□□□□ -0.61
HMHB1-201ENST00000289448 GOLGA8HP0CJ92 632 aa11.22□□□□□ -0.61
HMHB1-201ENST00000289448 CST5P28325 142 aaPredicted RBP11.22□□□□□ -0.61
HMHB1-201ENST00000289448 GJA9P57773 515 aa11.22□□□□□ -0.61
HMHB1-201ENST00000289448 TMEM63BQ5T3F8 832 aa11.22□□□□□ -0.61
HMHB1-201ENST00000289448 TTC22Q5TAA0 569 aa11.22□□□□□ -0.61
HMHB1-201ENST00000289448 NSMFQ6X4W1 530 aa11.22□□□□□ -0.61
HMHB1-201ENST00000289448 Q7L0L9 218 aa11.22□□□□□ -0.61
HMHB1-201ENST00000289448 CLEC4DQ8WXI8 215 aa11.22□□□□□ -0.61
HMHB1-201ENST00000289448 ESR2Q92731 530 aa11.22□□□□□ -0.61
HMHB1-201ENST00000289448 BADQ92934 168 aa11.22□□□□□ -0.61
HMHB1-201ENST00000289448 LBHD1Q9BQE6 289 aaPredicted RBP11.22□□□□□ -0.61
HMHB1-201ENST00000289448 DSCC1Q9BVC3 393 aa11.22□□□□□ -0.61
HMHB1-201ENST00000289448 CPVLQ9H3G5 476 aa11.22□□□□□ -0.61
HMHB1-201ENST00000289448 RNF41Q9H4P4 317 aaPredicted RBP11.22□□□□□ -0.61
HMHB1-201ENST00000289448 PDGFCQ9NRA1 345 aa11.22□□□□□ -0.61
HMHB1-201ENST00000289448 PRKAG2Q9UGJ0 569 aa11.22□□□□□ -0.61
HMHB1-201ENST00000289448 EYSQ5T1H1 3165 aa11.22□□□□□ -0.61
HMHB1-201ENST00000289448 UNC80Q8N2C7 3258 aa11.21□□□□□ -0.61
HMHB1-201ENST00000289448 MOXD2PA6NHM9 499 aa11.21□□□□□ -0.61
HMHB1-201ENST00000289448 ASB14A6NK59 587 aa11.21□□□□□ -0.61
HMHB1-201ENST00000289448 B4E1Z4 1266 aa11.21□□□□□ -0.61
HMHB1-201ENST00000289448 PQBP1O60828 265 aaKnown RBP11.21□□□□□ -0.61
HMHB1-201ENST00000289448 ASGR1P07306 291 aa11.21□□□□□ -0.61
HMHB1-201ENST00000289448 C6orf222P0C671 652 aaPredicted RBP11.21□□□□□ -0.61
HMHB1-201ENST00000289448 BEX3Q00994 111 aa11.21□□□□□ -0.61
HMHB1-201ENST00000289448 BAATQ14032 418 aaPredicted RBP11.21□□□□□ -0.61
HMHB1-201ENST00000289448 C9orf50Q5SZB4 431 aa11.21□□□□□ -0.61
HMHB1-201ENST00000289448 TAPT1Q6NXT6 567 aa11.21□□□□□ -0.61
HMHB1-201ENST00000289448 EEPD1Q7L9B9 569 aa11.21□□□□□ -0.61
HMHB1-201ENST00000289448 DGKHQ86XP1 1220 aa11.21□□□□□ -0.61
HMHB1-201ENST00000289448 MORC4Q8TE76 937 aa11.21□□□□□ -0.61
HMHB1-201ENST00000289448 ANKS1AQ92625 1134 aa11.21□□□□□ -0.61
HMHB1-201ENST00000289448 UBA5Q9GZZ9 404 aa11.21□□□□□ -0.61
HMHB1-201ENST00000289448 STARD7Q9NQZ5 370 aa11.21□□□□□ -0.61
HMHB1-201ENST00000289448 ZSWIM5Q9P217 1185 aa11.21□□□□□ -0.61
HMHB1-201ENST00000289448 GNEQ9Y223 722 aaKnown RBP11.21□□□□□ -0.61
HMHB1-201ENST00000289448 NEFLP07196 543 aa11.2□□□□□ -0.62
HMHB1-201ENST00000289448 CLTBP09497 229 aa11.2□□□□□ -0.62
HMHB1-201ENST00000289448 SMPD1P17405 629 aa11.2□□□□□ -0.62
HMHB1-201ENST00000289448 CDK7P50613 346 aa11.2□□□□□ -0.62
HMHB1-201ENST00000289448 EPHB4P54760 987 aa11.2□□□□□ -0.62
HMHB1-201ENST00000289448 NKX3-2P78367 333 aa11.2□□□□□ -0.62
HMHB1-201ENST00000289448 TNFAIP2Q03169 654 aa11.2□□□□□ -0.62
HMHB1-201ENST00000289448 FAAP100Q0VG06 881 aa11.2□□□□□ -0.62
HMHB1-201ENST00000289448 SHHQ15465 462 aa11.2□□□□□ -0.62
HMHB1-201ENST00000289448 GNASQ5JWF2 1037 aa11.2□□□□□ -0.62
HMHB1-201ENST00000289448 GPR153Q6NV75 609 aa11.2□□□□□ -0.62
HMHB1-201ENST00000289448 SLC30A10Q6XR72 485 aa11.2□□□□□ -0.62
HMHB1-201ENST00000289448 ANKRD33Q7Z3H0 272 aa11.2□□□□□ -0.62
HMHB1-201ENST00000289448 FBXO16Q8IX29 292 aaPredicted RBP11.2□□□□□ -0.62
HMHB1-201ENST00000289448 DEFB123Q8N688 67 aa11.2□□□□□ -0.62
HMHB1-201ENST00000289448 ENAHQ8N8S7 591 aaPredicted RBP11.2□□□□□ -0.62
HMHB1-201ENST00000289448 PNMA1Q8ND90 353 aa11.2□□□□□ -0.62
HMHB1-201ENST00000289448 NUP133Q8WUM0 1156 aa11.2□□□□□ -0.62
HMHB1-201ENST00000289448 ZSCAN10Q96SZ4 725 aaPredicted RBP11.2□□□□□ -0.62
HMHB1-201ENST00000289448 PRUNE2Q8WUY3 3088 aa11.2□□□□□ -0.62
HMHB1-201ENST00000289448 LTBP2Q14767 1821 aa11.2□□□□□ -0.62
HMHB1-201ENST00000289448 LCTP09848 1927 aa11.19□□□□□ -0.62
HMHB1-201ENST00000289448 KIAA0355O15063 1070 aa11.19□□□□□ -0.62
HMHB1-201ENST00000289448 CHMLP26374 656 aa11.19□□□□□ -0.62
HMHB1-201ENST00000289448 ALDH5A1P51649 535 aaPredicted RBP11.19□□□□□ -0.62
HMHB1-201ENST00000289448 PTH1RQ03431 593 aa11.19□□□□□ -0.62
HMHB1-201ENST00000289448 IMMTQ16891 758 aaKnown RBP11.19□□□□□ -0.62
HMHB1-201ENST00000289448 IQCA1Q86XH1 822 aa11.19□□□□□ -0.62
HMHB1-201ENST00000289448 TOX2Q96NM4 488 aa11.19□□□□□ -0.62
HMHB1-201ENST00000289448 CTNNA3Q9UI47 895 aa11.19□□□□□ -0.62
HMHB1-201ENST00000289448 TAF6LQ9Y6J9 622 aa11.19□□□□□ -0.62
HMHB1-201ENST00000289448 ELP1O95163 1332 aa11.18□□□□□ -0.62
HMHB1-201ENST00000289448 TNKSO95271 1327 aa11.18□□□□□ -0.62
HMHB1-201ENST00000289448 CHD9Q3L8U1 2897 aa11.18□□□□□ -0.62
HMHB1-201ENST00000289448 PTPDC1A2A3K4 754 aa11.18□□□□□ -0.62
HMHB1-201ENST00000289448 DYNC1LI2O43237 492 aaPredicted RBP11.18□□□□□ -0.62
HMHB1-201ENST00000289448 CALML3P27482 149 aa11.18□□□□□ -0.62
HMHB1-201ENST00000289448 GPATCH4Q5T3I0 446 aaKnown RBP11.18□□□□□ -0.62
HMHB1-201ENST00000289448 CXCL17Q6UXB2 119 aa11.18□□□□□ -0.62
HMHB1-201ENST00000289448 NOL8Q76FK4 1167 aaKnown RBP11.18□□□□□ -0.62
HMHB1-201ENST00000289448 CYB5R4Q7L1T6 521 aa11.18□□□□□ -0.62
HMHB1-201ENST00000289448 TLK2Q86UE8 772 aa11.18□□□□□ -0.62
HMHB1-201ENST00000289448 ADGRF4Q8IZF3 695 aa11.18□□□□□ -0.62
HMHB1-201ENST00000289448 PCSK9Q8NBP7 692 aaKnown RBP11.18□□□□□ -0.62
HMHB1-201ENST00000289448 TBC1D5Q92609 795 aa11.18□□□□□ -0.62
HMHB1-201ENST00000289448 GLT1D1Q96MS3 346 aa11.18□□□□□ -0.62
HMHB1-201ENST00000289448 KAT14Q9H8E8 782 aa11.18□□□□□ -0.62
HMHB1-201ENST00000289448 SPC25Q9HBM1 224 aa11.18□□□□□ -0.62
HMHB1-201ENST00000289448 TMEM39AQ9NV64 488 aa11.18□□□□□ -0.62
HMHB1-201ENST00000289448 MTMR10Q9NXD2 777 aa11.18□□□□□ -0.62
HMHB1-201ENST00000289448 LAMA4Q16363 1823 aa11.18□□□□□ -0.62
HMHB1-201ENST00000289448 VCANP13611 3396 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms