RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 PTPDC1A2A3K4 754 aa29.25■■■□□ 2.27
PDF-201ENST00000288022 MSCO60682 206 aa29.25■■■□□ 2.27
PDF-201ENST00000288022 FAM133AQ8N9E0 248 aa29.25■■■□□ 2.27
PDF-201ENST00000288022 TCEANC2Q96MN5 208 aa29.25■■■□□ 2.27
PDF-201ENST00000288022 OGDHLQ9ULD0 1010 aa29.25■■■□□ 2.27
PDF-201ENST00000288022 SNX14Q9Y5W7 946 aa29.25■■■□□ 2.27
PDF-201ENST00000288022 SMCHD1A6NHR9 2005 aa29.25■■■□□ 2.27
PDF-201ENST00000288022 SYNGAP1Q96PV0 1343 aa29.24■■■□□ 2.27
PDF-201ENST00000288022 HMGB1P09429 215 aaKnown RBP29.24■■■□□ 2.27
PDF-201ENST00000288022 KIF5BP33176 963 aa29.24■■■□□ 2.27
PDF-201ENST00000288022 LHX8Q68G74 356 aa29.24■■■□□ 2.27
PDF-201ENST00000288022 FBXO11Q86XK2 927 aa29.24■■■□□ 2.27
PDF-201ENST00000288022 CLEC4DQ8WXI8 215 aa29.24■■■□□ 2.27
PDF-201ENST00000288022 KCNB2Q92953 911 aa29.24■■■□□ 2.27
PDF-201ENST00000288022 FGD4Q96M96 766 aa29.24■■■□□ 2.27
PDF-201ENST00000288022 JAKMIP1Q96N16 626 aaKnown RBP29.24■■■□□ 2.27
PDF-201ENST00000288022 NRBP1Q9UHY1 535 aa29.24■■■□□ 2.27
PDF-201ENST00000288022 SLC12A7Q9Y666 1083 aa29.24■■■□□ 2.27
PDF-201ENST00000288022 ABCB11O95342 1321 aa29.23■■■□□ 2.27
PDF-201ENST00000288022 SEPT4O43236 478 aa29.23■■■□□ 2.27
PDF-201ENST00000288022 BAATQ14032 418 aaPredicted RBP29.23■■■□□ 2.27
PDF-201ENST00000288022 MAMDC4Q6UXC1 1216 aa29.23■■■□□ 2.27
PDF-201ENST00000288022 HOMER1Q86YM7 354 aa29.23■■■□□ 2.27
PDF-201ENST00000288022 MAP3K14Q99558 947 aa29.23■■■□□ 2.27
PDF-201ENST00000288022 BRCA2P51587 3418 aa29.23■■■□□ 2.27
PDF-201ENST00000288022 EPB41L2O43491 1005 aaKnown RBP29.22■■■□□ 2.27
PDF-201ENST00000288022 CALM1P0DP23 149 aa29.22■■■□□ 2.27
PDF-201ENST00000288022 CALM2P0DP24 149 aa29.22■■■□□ 2.27
PDF-201ENST00000288022 CALM3P0DP25 149 aa29.22■■■□□ 2.27
PDF-201ENST00000288022 EXOSC10Q01780 885 aaKnown RBP29.22■■■□□ 2.27
PDF-201ENST00000288022 ANO1Q5XXA6 986 aa29.22■■■□□ 2.27
PDF-201ENST00000288022 SYNE3Q6ZMZ3 975 aa29.22■■■□□ 2.27
PDF-201ENST00000288022 RNF207Q6ZRF8 634 aa29.22■■■□□ 2.27
PDF-201ENST00000288022 RAB11FIP4Q86YS3 637 aa29.22■■■□□ 2.27
PDF-201ENST00000288022 ANKLE1Q8NAG6 615 aa29.22■■■□□ 2.27
PDF-201ENST00000288022 MYH6P13533 1939 aa29.22■■■□□ 2.27
PDF-201ENST00000288022 SOWAHBA6NEL2 793 aa29.21■■■□□ 2.27
PDF-201ENST00000288022 ZBTB5O15062 677 aa29.21■■■□□ 2.27
PDF-201ENST00000288022 SNAI1O95863 264 aaPredicted RBP29.21■■■□□ 2.27
PDF-201ENST00000288022 RXRAP19793 462 aa29.21■■■□□ 2.27
PDF-201ENST00000288022 CALML3P27482 149 aa29.21■■■□□ 2.27
PDF-201ENST00000288022 FGD1P98174 961 aa29.21■■■□□ 2.27
PDF-201ENST00000288022 SLC30A10Q6XR72 485 aa29.21■■■□□ 2.27
PDF-201ENST00000288022 ARMCX2Q7L311 632 aa29.21■■■□□ 2.27
PDF-201ENST00000288022 CCDC144CPQ8IYA2 1237 aa29.21■■■□□ 2.27
PDF-201ENST00000288022 AMNQ9BXJ7 453 aa29.21■■■□□ 2.27
PDF-201ENST00000288022 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.21■■■□□ 2.27
PDF-201ENST00000288022 ZHX1Q9UKY1 873 aaPredicted RBP29.21■■■□□ 2.27
PDF-201ENST00000288022 FRMPD3Q5JV73 1810 aa29.21■■■□□ 2.27
PDF-201ENST00000288022 CPA1P15085 419 aa29.2■■■□□ 2.26
PDF-201ENST00000288022 BLOC1S2Q6QNY1 142 aa29.2■■■□□ 2.26
PDF-201ENST00000288022 DIS3LQ8TF46 1054 aaKnown RBP29.2■■■□□ 2.26
PDF-201ENST00000288022 PAWRQ96IZ0 340 aaKnown RBP29.2■■■□□ 2.26
PDF-201ENST00000288022 PURBQ96QR8 312 aaKnown RBP29.2■■■□□ 2.26
PDF-201ENST00000288022 PIGSQ96S52 555 aa29.2■■■□□ 2.26
PDF-201ENST00000288022 USP26Q9BXU7 913 aa29.2■■■□□ 2.26
PDF-201ENST00000288022 RIOX1Q9H6W3 641 aa29.2■■■□□ 2.26
PDF-201ENST00000288022 MRPL11Q9Y3B7 192 aaKnown RBP29.2■■■□□ 2.26
PDF-201ENST00000288022 ASB14A6NK59 587 aa29.19■■■□□ 2.26
PDF-201ENST00000288022 SLC35G1Q2M3R5 365 aa29.19■■■□□ 2.26
PDF-201ENST00000288022 UBE2Q1Q7Z7E8 422 aa29.19■■■□□ 2.26
PDF-201ENST00000288022 SGMS1Q86VZ5 419 aa29.19■■■□□ 2.26
PDF-201ENST00000288022 MICU3Q86XE3 530 aa29.19■■■□□ 2.26
PDF-201ENST00000288022 PIBF1Q8WXW3 757 aa29.19■■■□□ 2.26
PDF-201ENST00000288022 MTMR8Q96EF0 704 aa29.19■■■□□ 2.26
PDF-201ENST00000288022 ADD3Q9UEY8 706 aaKnown RBP29.19■■■□□ 2.26
PDF-201ENST00000288022 CYTH3O43739 400 aa29.18■■■□□ 2.26
PDF-201ENST00000288022 ZNF865P0CJ78 1059 aaPredicted RBP29.18■■■□□ 2.26
PDF-201ENST00000288022 PSMA5P28066 241 aa29.18■■■□□ 2.26
PDF-201ENST00000288022 GNAQP50148 359 aa29.18■■■□□ 2.26
PDF-201ENST00000288022 NECAB2Q7Z6G3 386 aa29.18■■■□□ 2.26
PDF-201ENST00000288022 MYCNP04198 464 aaPredicted RBP29.17■■■□□ 2.26
PDF-201ENST00000288022 AKR1A1P14550 325 aa29.17■■■□□ 2.26
PDF-201ENST00000288022 RPS6P62753 249 aaKnown RBP29.17■■■□□ 2.26
PDF-201ENST00000288022 ACVR2BQ13705 512 aa29.17■■■□□ 2.26
PDF-201ENST00000288022 LZTS2Q9BRK4 669 aa29.17■■■□□ 2.26
PDF-201ENST00000288022 ABHD16BQ9H3Z7 469 aa29.17■■■□□ 2.26
PDF-201ENST00000288022 PCDHA1Q9Y5I3 950 aa29.17■■■□□ 2.26
PDF-201ENST00000288022 LCTP09848 1927 aa29.16■■■□□ 2.26
PDF-201ENST00000288022 PPP1R11O60927 126 aaPredicted RBP29.16■■■□□ 2.26
PDF-201ENST00000288022 RARBP10826 455 aa29.16■■■□□ 2.26
PDF-201ENST00000288022 APOA5Q6Q788 366 aa29.16■■■□□ 2.26
PDF-201ENST00000288022 MCF2L2Q86YR7 1114 aa29.16■■■□□ 2.26
PDF-201ENST00000288022 RGS22Q8NE09 1264 aa29.16■■■□□ 2.26
PDF-201ENST00000288022 HTATIP2Q9BUP3 242 aa29.16■■■□□ 2.26
PDF-201ENST00000288022 FAM184BQ9ULE4 1060 aa29.16■■■□□ 2.26
PDF-201ENST00000288022 NAP1L2Q9ULW6 460 aaPredicted RBP29.16■■■□□ 2.26
PDF-201ENST00000288022 ASTN1O14525 1302 aa29.16■■■□□ 2.26
PDF-201ENST00000288022 MCM3APO60318 1980 aa29.15■■■□□ 2.26
PDF-201ENST00000288022 PNMA6FA0A0J9YX94 578 aa29.15■■■□□ 2.26
PDF-201ENST00000288022 PLEKHA8P1O95397 391 aa29.15■■■□□ 2.26
PDF-201ENST00000288022 CASTP20810 708 aaKnown RBP29.15■■■□□ 2.26
PDF-201ENST00000288022 TRAF1Q13077 416 aa29.15■■■□□ 2.26
PDF-201ENST00000288022 FANCBQ8NB91 859 aa29.15■■■□□ 2.26
PDF-201ENST00000288022 SPZ1Q9BXG8 430 aa29.15■■■□□ 2.26
PDF-201ENST00000288022 C11orf49Q9H6J7 331 aa29.15■■■□□ 2.26
PDF-201ENST00000288022 DDX49Q9Y6V7 483 aaKnown RBP29.15■■■□□ 2.26
PDF-201ENST00000288022 KLF18A0A0U1RQI7 1052 aa29.14■■■□□ 2.26
PDF-201ENST00000288022 RPS6KB1P23443 525 aa29.14■■■□□ 2.26
PDF-201ENST00000288022 MNX1P50219 401 aaPredicted RBP29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms