RNA–Protein interactions for RNA: ENST00000275575.11

PHTF2-202, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-202ENST00000275575 IFIT1P09914 478 aaKnown RBP4.12□□□□□ -1.75
PHTF2-202ENST00000275575 ERCC3P19447 782 aa4.12□□□□□ -1.75
PHTF2-202ENST00000275575 FCGRTP55899 365 aa4.12□□□□□ -1.75
PHTF2-202ENST00000275575 DCAF15Q66K64 600 aa4.12□□□□□ -1.75
PHTF2-202ENST00000275575 TMEM179Q6ZVK1 233 aa4.12□□□□□ -1.75
PHTF2-202ENST00000275575 GTF3C2Q8WUA4 911 aaPredicted RBP4.12□□□□□ -1.75
PHTF2-202ENST00000275575 TNFRSF25Q93038 417 aa4.12□□□□□ -1.75
PHTF2-202ENST00000275575 KIF2CQ99661 725 aa4.12□□□□□ -1.75
PHTF2-202ENST00000275575 CCDC8Q9H0W5 538 aaPredicted RBP4.12□□□□□ -1.75
PHTF2-202ENST00000275575 PAG1Q9NWQ8 432 aa4.12□□□□□ -1.75
PHTF2-202ENST00000275575 MTCH2Q9Y6C9 303 aa4.12□□□□□ -1.75
PHTF2-202ENST00000275575 IGLV3-22A0A075B6J6 115 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 PIK3CDO00329 1044 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 NRG2O14511 850 aaPredicted RBP4.11□□□□□ -1.75
PHTF2-202ENST00000275575 SMARCA5O60264 1052 aaPredicted RBP4.11□□□□□ -1.75
PHTF2-202ENST00000275575 LILRB3O75022 631 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 NECTIN1Q15223 517 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 CAVIN4Q5BKX8 364 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 AKNAD1Q5T1N1 836 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 MB21D2Q8IYB1 491 aaPredicted RBP4.11□□□□□ -1.75
PHTF2-202ENST00000275575 TBC1D5Q92609 795 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 CLP1Q92989 425 aaKnown RBP4.11□□□□□ -1.75
PHTF2-202ENST00000275575 AKAP2Q9Y2D5 859 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 SCN8AQ9UQD0 1980 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 USP17L15C9J2P7 530 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 USP17L13C9JLJ4 530 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 USP17L11C9JVI0 530 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 USP17L18D6R9N7 530 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 USP17L22D6RA61 530 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 USP17L17D6RBQ6 530 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 USP17L19D6RCP7 530 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 USP17L20D6RJB6 530 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 PLIN1O60240 522 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 RAB11FIP3O75154 756 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 ICAM3P32942 547 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 SLC4A3P48751 1232 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 USP17L24Q0WX57 530 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 TRIM60Q495X7 471 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 SLC9C1Q4G0N8 1177 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 ZKSCAN2Q63HK3 967 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 PLEKHH3Q7Z736 793 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 GPRC5AQ8NFJ5 357 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 DEFB118Q96PH6 123 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.11□□□□□ -1.757e-7■□□□□ 8.3
PHTF2-202ENST00000275575 SMC4Q9NTJ3 1288 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 SWAP70Q9UH65 585 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 TMEM131Q92545 1883 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 CNTN2Q02246 1040 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 ARTNQ5T4W7 220 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 IL31RAQ8NI17 732 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 NELL1Q92832 810 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 TINF2Q9BSI4 451 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 C9orf78Q9NZ63 289 aaPredicted RBP4.11□□□□□ -1.75
PHTF2-202ENST00000275575 RAD50Q92878 1312 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 ASH1LQ9NR48 2969 aaKnown RBP4.11□□□□□ -1.75
PHTF2-202ENST00000275575 PLXNA2O75051 1894 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 HSPD1P10809 573 aaKnown RBP4.11□□□□□ -1.75
PHTF2-202ENST00000275575 TDGF1P13385 188 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 NAB2Q15742 525 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 TSHZ3Q63HK5 1081 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 CD300LGQ6UXG3 332 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 ERICH6Q7L0X2 663 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 IFNL3Q8IZI9 196 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 GPKOWQ92917 476 aaPredicted RBP eCLIP4.11□□□□□ -1.754e-7■□□□□ 10.8
PHTF2-202ENST00000275575 VN1R3Q9BXE9 311 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 LSG1Q9H089 658 aaKnown RBP4.11□□□□□ -1.75
PHTF2-202ENST00000275575 ARMT1Q9H993 441 aa4.11□□□□□ -1.75
PHTF2-202ENST00000275575 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.11□□□□□ -1.75
PHTF2-202ENST00000275575 DUSP11O75319 330 aaKnown RBP4.1□□□□□ -1.75
PHTF2-202ENST00000275575 F2P00734 622 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 CYP2C19P33261 490 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 PKN1Q16512 942 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 MFSD5Q6N075 450 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 SLC30A10Q6XR72 485 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 TMEM184AQ6ZMB5 413 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 ATP8B4Q8TF62 1192 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 CHRDQ9H2X0 955 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 MROH8Q9H579 483 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 LCHNA4D1U4 455 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 PATL2C9JE40 543 aaKnown RBP4.1□□□□□ -1.75
PHTF2-202ENST00000275575 B4GALT3O60512 393 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 GLP2RO95838 553 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 GTF2E1P29083 439 aaPredicted RBP4.1□□□□□ -1.75
PHTF2-202ENST00000275575 ACLYP53396 1101 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 CHFRQ96EP1 664 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 FAM227BQ96M60 508 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 S1PR5Q9H228 398 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 TMX1Q9H3N1 280 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 VEZTQ9HBM0 779 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 MYH10P35580 1976 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 CKAP5Q14008 2032 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 PDE1AP54750 535 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 SPIRE1Q08AE8 756 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 COG2Q14746 738 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 CERS3Q8IU89 383 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 GCC1Q96CN9 775 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 MAP3K14Q99558 947 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 SCN1AP35498 2009 aa4.1□□□□□ -1.75
PHTF2-202ENST00000275575 NFIBO00712 420 aa4.09□□□□□ -1.75
PHTF2-202ENST00000275575 FARP2O94887 1054 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms