RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 AS3MTQ9HBK9 375 aa16.54■□□□□ 0.24
TRIM23-202ENST00000274327 FZD1Q9UP38 647 aa16.54■□□□□ 0.24
TRIM23-202ENST00000274327 PARP14Q460N5 1801 aa16.54■□□□□ 0.24
TRIM23-202ENST00000274327 OTOFQ9HC10 1997 aa16.53■□□□□ 0.24
TRIM23-202ENST00000274327 LAD1O00515 517 aa16.53■□□□□ 0.24
TRIM23-202ENST00000274327 USP2O75604 605 aaPredicted RBP16.53■□□□□ 0.24
TRIM23-202ENST00000274327 USP14P54578 494 aa16.53■□□□□ 0.24
TRIM23-202ENST00000274327 TRAF1Q13077 416 aa16.53■□□□□ 0.24
TRIM23-202ENST00000274327 IL17AQ16552 155 aa16.53■□□□□ 0.24
TRIM23-202ENST00000274327 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.53■□□□□ 0.24
TRIM23-202ENST00000274327 TMEM60Q9H2L4 133 aa16.53■□□□□ 0.24
TRIM23-202ENST00000274327 RRAGDQ9NQL2 400 aaPredicted RBP16.53■□□□□ 0.24
TRIM23-202ENST00000274327 WDR90Q96KV7 1748 aa16.52■□□□□ 0.24
TRIM23-202ENST00000274327 ADM5C9JUS6 153 aa16.52■□□□□ 0.24
TRIM23-202ENST00000274327 MEIS2O14770 477 aa16.52■□□□□ 0.24
TRIM23-202ENST00000274327 EPHX2P34913 555 aa16.52■□□□□ 0.24
TRIM23-202ENST00000274327 PRPHP41219 470 aa16.52■□□□□ 0.24
TRIM23-202ENST00000274327 TYRO3Q06418 890 aa16.52■□□□□ 0.24
TRIM23-202ENST00000274327 TEX2Q8IWB9 1127 aa16.52■□□□□ 0.24
TRIM23-202ENST00000274327 SULF1Q8IWU6 871 aa16.52■□□□□ 0.24
TRIM23-202ENST00000274327 ELOA2Q8IYF1 753 aaPredicted RBP16.52■□□□□ 0.24
TRIM23-202ENST00000274327 ZC3H15Q8WU90 426 aaKnown RBP16.52■□□□□ 0.24
TRIM23-202ENST00000274327 KIFC2Q96AC6 838 aa16.52■□□□□ 0.24
TRIM23-202ENST00000274327 PICK1Q9NRD5 415 aa16.52■□□□□ 0.24
TRIM23-202ENST00000274327 EMILIN3Q9NT22 766 aa16.52■□□□□ 0.24
TRIM23-202ENST00000274327 VWA3AA6NCI4 1184 aa16.52■□□□□ 0.23
TRIM23-202ENST00000274327 BACE1P56817 501 aa16.52■□□□□ 0.23
TRIM23-202ENST00000274327 MTMR2Q13614 643 aa16.52■□□□□ 0.23
TRIM23-202ENST00000274327 LETM2Q2VYF4 491 aa16.52■□□□□ 0.23
TRIM23-202ENST00000274327 USP49Q70CQ1 688 aa16.52■□□□□ 0.23
TRIM23-202ENST00000274327 ZNF280CQ8ND82 737 aa16.52■□□□□ 0.23
TRIM23-202ENST00000274327 SDF4Q9BRK5 362 aa16.52■□□□□ 0.23
TRIM23-202ENST00000274327 FBXO28Q9NVF7 368 aa16.52■□□□□ 0.23
TRIM23-202ENST00000274327 OPLAHO14841 1288 aa16.51■□□□□ 0.23
TRIM23-202ENST00000274327 CCNT1O60563 726 aaKnown RBP16.51■□□□□ 0.23
TRIM23-202ENST00000274327 LONP1P36776 959 aaKnown RBP16.51■□□□□ 0.23
TRIM23-202ENST00000274327 SPP2Q13103 211 aa16.51■□□□□ 0.23
TRIM23-202ENST00000274327 AP3B2Q13367 1082 aa16.51■□□□□ 0.23
TRIM23-202ENST00000274327 USH1GQ495M9 461 aa16.51■□□□□ 0.23
TRIM23-202ENST00000274327 MCTP2Q6DN12 878 aa16.51■□□□□ 0.23
TRIM23-202ENST00000274327 KRBA2Q6ZNG9 492 aa16.51■□□□□ 0.23
TRIM23-202ENST00000274327 SYMPKQ92797 1274 aaKnown RBP16.51■□□□□ 0.23
TRIM23-202ENST00000274327 C12orf42Q96LP6 360 aa16.51■□□□□ 0.23
TRIM23-202ENST00000274327 USP17L15C9J2P7 530 aa16.5■□□□□ 0.23
TRIM23-202ENST00000274327 USP17L13C9JLJ4 530 aa16.5■□□□□ 0.23
TRIM23-202ENST00000274327 USP17L11C9JVI0 530 aa16.5■□□□□ 0.23
TRIM23-202ENST00000274327 USP17L18D6R9N7 530 aa16.5■□□□□ 0.23
TRIM23-202ENST00000274327 USP17L22D6RA61 530 aa16.5■□□□□ 0.23
TRIM23-202ENST00000274327 USP17L17D6RBQ6 530 aa16.5■□□□□ 0.23
TRIM23-202ENST00000274327 USP17L19D6RCP7 530 aa16.5■□□□□ 0.23
TRIM23-202ENST00000274327 USP17L20D6RJB6 530 aa16.5■□□□□ 0.23
TRIM23-202ENST00000274327 TAL1P17542 331 aaPredicted RBP16.5■□□□□ 0.23
TRIM23-202ENST00000274327 VCAM1P19320 739 aa16.5■□□□□ 0.23
TRIM23-202ENST00000274327 USP17L24Q0WX57 530 aa16.5■□□□□ 0.23
TRIM23-202ENST00000274327 DGKZQ13574 1117 aa16.5■□□□□ 0.23
TRIM23-202ENST00000274327 LONRF3Q496Y0 759 aa16.5■□□□□ 0.23
TRIM23-202ENST00000274327 USP17L6PQ6QN14 398 aa16.5■□□□□ 0.23
TRIM23-202ENST00000274327 SASS6Q6UVJ0 657 aa16.5■□□□□ 0.23
TRIM23-202ENST00000274327 DLK2Q6UY11 383 aa16.5■□□□□ 0.23
TRIM23-202ENST00000274327 SLF1Q9BQI6 1058 aa16.5■□□□□ 0.23
TRIM23-202ENST00000274327 RLFQ13129 1914 aa16.5■□□□□ 0.23
TRIM23-202ENST00000274327 PIK3CDO00329 1044 aa16.49■□□□□ 0.23
TRIM23-202ENST00000274327 NEMFO60524 1076 aa16.49■□□□□ 0.23
TRIM23-202ENST00000274327 OR52Z1P0C646 297 aa16.49■□□□□ 0.23
TRIM23-202ENST00000274327 CCDC174Q6PII3 467 aa16.49■□□□□ 0.23
TRIM23-202ENST00000274327 KRT26Q7Z3Y9 468 aa16.49■□□□□ 0.23
TRIM23-202ENST00000274327 PRPF38AQ8NAV1 312 aaKnown RBP16.49■□□□□ 0.23
TRIM23-202ENST00000274327 EPSTI1Q96J88 318 aa16.49■□□□□ 0.23
TRIM23-202ENST00000274327 ANO3Q9BYT9 981 aa16.49■□□□□ 0.23
TRIM23-202ENST00000274327 PANK2Q9BZ23 570 aa16.49■□□□□ 0.23
TRIM23-202ENST00000274327 TAF1DQ9H5J8 278 aaPredicted RBP16.49■□□□□ 0.23
TRIM23-202ENST00000274327 KIAA1468Q9P260 1216 aa16.49■□□□□ 0.23
TRIM23-202ENST00000274327 POTECB2RU33 542 aa16.49■□□□□ 0.23
TRIM23-202ENST00000274327 C19orf81C9J6K1 198 aa16.49■□□□□ 0.23
TRIM23-202ENST00000274327 POLR2DO15514 142 aaKnown RBP16.49■□□□□ 0.23
TRIM23-202ENST00000274327 MAP3K9P80192 1104 aa16.49■□□□□ 0.23
TRIM23-202ENST00000274327 PPP4R3AQ6IN85 833 aa16.49■□□□□ 0.23
TRIM23-202ENST00000274327 DTHD1Q6ZMT9 781 aa16.49■□□□□ 0.23
TRIM23-202ENST00000274327 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.49■□□□□ 0.23
TRIM23-202ENST00000274327 RNF214Q8ND24 703 aa16.49■□□□□ 0.23
TRIM23-202ENST00000274327 P2RX7Q99572 595 aaKnown RBP16.49■□□□□ 0.23
TRIM23-202ENST00000274327 SNCAIPQ9Y6H5 919 aa16.49■□□□□ 0.23
TRIM23-202ENST00000274327 ZHX2Q9Y6X8 837 aa16.49■□□□□ 0.23
TRIM23-202ENST00000274327 PTPRFP10586 1907 aa16.49■□□□□ 0.23
TRIM23-202ENST00000274327 ABCB11O95342 1321 aa16.48■□□□□ 0.23
TRIM23-202ENST00000274327 A0A087X0B3 334 aa16.48■□□□□ 0.23
TRIM23-202ENST00000274327 ACTN4O43707 911 aaKnown RBP16.48■□□□□ 0.23
TRIM23-202ENST00000274327 TDP2O95551 362 aa16.48■□□□□ 0.23
TRIM23-202ENST00000274327 UVSSAQ2YD98 709 aa16.48■□□□□ 0.23
TRIM23-202ENST00000274327 CNNM3Q8NE01 707 aa16.48■□□□□ 0.23
TRIM23-202ENST00000274327 CRYGNQ8WXF5 182 aa16.48■□□□□ 0.23
TRIM23-202ENST00000274327 MTMR9Q96QG7 549 aa16.48■□□□□ 0.23
TRIM23-202ENST00000274327 NAP1L4Q99733 375 aaKnown RBP16.48■□□□□ 0.23
TRIM23-202ENST00000274327 RPAP3Q9H6T3 665 aaPredicted RBP16.48■□□□□ 0.23
TRIM23-202ENST00000274327 SERTAD1Q9UHV2 236 aa16.48■□□□□ 0.23
TRIM23-202ENST00000274327 PPP1R9AQ9ULJ8 1098 aa16.48■□□□□ 0.23
TRIM23-202ENST00000274327 AFG3L2Q9Y4W6 797 aa16.48■□□□□ 0.23
TRIM23-202ENST00000274327 ZNF536O15090 1300 aa16.48■□□□□ 0.23
TRIM23-202ENST00000274327 IQCA1LA6NCM1 817 aa16.47■□□□□ 0.23
TRIM23-202ENST00000274327 FOSP01100 380 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms