RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 KRT79Q5XKE5 535 aa12.67□□□□□ -0.38
SKP2-202ENST00000274255 FNBP4Q8N3X1 1017 aaPredicted RBP12.67□□□□□ -0.38
SKP2-202ENST00000274255 MB21D1Q8N884 522 aa12.67□□□□□ -0.38
SKP2-202ENST00000274255 TBC1D31Q96DN5 1066 aa12.67□□□□□ -0.38
SKP2-202ENST00000274255 OPA1O60313 960 aa12.66□□□□□ -0.38
SKP2-202ENST00000274255 HEXIM1O94992 359 aaKnown RBP12.66□□□□□ -0.38
SKP2-202ENST00000274255 HIBADHP31937 336 aaKnown RBP12.66□□□□□ -0.38
SKP2-202ENST00000274255 VPS41P49754 854 aa12.66□□□□□ -0.38
SKP2-202ENST00000274255 ADGRA1Q86SQ6 560 aa12.66□□□□□ -0.38
SKP2-202ENST00000274255 PPM1EQ8WY54 764 aa12.66□□□□□ -0.38
SKP2-202ENST00000274255 LSM14BQ9BX40 385 aaKnown RBP12.66□□□□□ -0.38
SKP2-202ENST00000274255 NAA15Q9BXJ9 866 aaKnown RBP12.66□□□□□ -0.38
SKP2-202ENST00000274255 TMEM260Q9NX78 707 aa12.66□□□□□ -0.38
SKP2-202ENST00000274255 GGT7Q9UJ14 662 aa12.66□□□□□ -0.38
SKP2-202ENST00000274255 FOXP2O15409 715 aa12.66□□□□□ -0.38
SKP2-202ENST00000274255 BMP15O95972 392 aa12.66□□□□□ -0.38
SKP2-202ENST00000274255 CALML3P27482 149 aa12.66□□□□□ -0.38
SKP2-202ENST00000274255 TCP10Q12799 353 aa12.66□□□□□ -0.38
SKP2-202ENST00000274255 STK4Q13043 487 aa12.66□□□□□ -0.38
SKP2-202ENST00000274255 TBC1D5Q92609 795 aa12.66□□□□□ -0.38
SKP2-202ENST00000274255 LBHD1Q9BQE6 289 aaPredicted RBP12.66□□□□□ -0.38
SKP2-202ENST00000274255 DNAJC17Q9NVM6 304 aaKnown RBP12.66□□□□□ -0.38
SKP2-202ENST00000274255 SLCO1A2P46721 670 aa12.66□□□□□ -0.38
SKP2-202ENST00000274255 KLHL30Q0D2K2 578 aa12.66□□□□□ -0.38
SKP2-202ENST00000274255 UBE4AQ14139 1066 aa12.66□□□□□ -0.38
SKP2-202ENST00000274255 NLRP3Q96P20 1036 aa12.66□□□□□ -0.38
SKP2-202ENST00000274255 SALL1Q9NSC2 1324 aa12.65□□□□□ -0.38
SKP2-202ENST00000274255 SFI1A8K8P3 1242 aa12.65□□□□□ -0.38
SKP2-202ENST00000274255 KLRK1P26718 216 aa12.65□□□□□ -0.38
SKP2-202ENST00000274255 UBE2SQ16763 222 aa12.65□□□□□ -0.38
SKP2-202ENST00000274255 ARHGAP44Q17R89 818 aa12.65□□□□□ -0.38
SKP2-202ENST00000274255 DDX42Q86XP3 938 aaKnown RBP eCLIP12.65□□□□□ -0.38
SKP2-202ENST00000274255 FAM133AQ8N9E0 248 aa12.65□□□□□ -0.38
SKP2-202ENST00000274255 TRIML1Q8N9V2 468 aa12.65□□□□□ -0.38
SKP2-202ENST00000274255 H7C1D1 291 aa12.65□□□□□ -0.38
SKP2-202ENST00000274255 TXNRD1Q16881 649 aa12.65□□□□□ -0.38
SKP2-202ENST00000274255 USH1GQ495M9 461 aa12.65□□□□□ -0.38
SKP2-202ENST00000274255 PHLDB2Q86SQ0 1253 aa12.65□□□□□ -0.38
SKP2-202ENST00000274255 DAAM2Q86T65 1068 aa12.65□□□□□ -0.38
SKP2-202ENST00000274255 FAM114A1Q8IWE2 563 aa12.65□□□□□ -0.38
SKP2-202ENST00000274255 KIRREL3Q8IZU9 778 aa12.65□□□□□ -0.38
SKP2-202ENST00000274255 RNF26Q9BY78 433 aaPredicted RBP12.65□□□□□ -0.38
SKP2-202ENST00000274255 TCEAL9Q9UHQ7 104 aa12.65□□□□□ -0.38
SKP2-202ENST00000274255 BAIAP2L1Q9UHR4 511 aa12.65□□□□□ -0.38
SKP2-202ENST00000274255 FAM169AQ9Y6X4 670 aa12.65□□□□□ -0.38
SKP2-202ENST00000274255 UTYO14607 1347 aa12.65□□□□□ -0.39
SKP2-202ENST00000274255 PPP1R3GB7ZBB8 358 aa12.65□□□□□ -0.39
SKP2-202ENST00000274255 LDHBP07195 334 aaKnown RBP12.65□□□□□ -0.39
SKP2-202ENST00000274255 VIMP08670 466 aaKnown RBP12.65□□□□□ -0.39
SKP2-202ENST00000274255 MYBL2P10244 700 aa12.65□□□□□ -0.39
SKP2-202ENST00000274255 DNM2P50570 870 aa12.65□□□□□ -0.39
SKP2-202ENST00000274255 CASP7P55210 303 aa12.65□□□□□ -0.39
SKP2-202ENST00000274255 NNTQ13423 1086 aa12.65□□□□□ -0.39
SKP2-202ENST00000274255 KRT71Q3SY84 523 aa12.65□□□□□ -0.39
SKP2-202ENST00000274255 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.65□□□□□ -0.39
SKP2-202ENST00000274255 CCDC121Q6ZUS5 278 aa12.65□□□□□ -0.39
SKP2-202ENST00000274255 ZNF622Q969S3 477 aaKnown RBP eCLIP12.65□□□□□ -0.39
SKP2-202ENST00000274255 THOC1Q96FV9 657 aaKnown RBP12.65□□□□□ -0.39
SKP2-202ENST00000274255 MLXIPLQ9NP71 852 aa12.65□□□□□ -0.39
SKP2-202ENST00000274255 L1RE1Q9UN81 338 aa12.65□□□□□ -0.39
SKP2-202ENST00000274255 PALLDQ8WX93 1383 aa12.64□□□□□ -0.39
SKP2-202ENST00000274255 NEFHP12036 1026 aa12.64□□□□□ -0.39
SKP2-202ENST00000274255 ERFEQ4G0M1 354 aa12.64□□□□□ -0.39
SKP2-202ENST00000274255 ZNF658Q5TYW1 1059 aaPredicted RBP12.64□□□□□ -0.39
SKP2-202ENST00000274255 KIFC2Q96AC6 838 aa12.64□□□□□ -0.39
SKP2-202ENST00000274255 NOX5Q96PH1 765 aa12.64□□□□□ -0.39
SKP2-202ENST00000274255 MED15Q96RN5 788 aa12.64□□□□□ -0.39
SKP2-202ENST00000274255 ATG3Q9NT62 314 aa12.64□□□□□ -0.39
SKP2-202ENST00000274255 SIGLEC1Q9BZZ2 1709 aa12.64□□□□□ -0.39
SKP2-202ENST00000274255 ANKRD40Q6AI12 368 aa12.64□□□□□ -0.39
SKP2-202ENST00000274255 CELF1Q92879 486 aaKnown RBP12.64□□□□□ -0.39
SKP2-202ENST00000274255 C6orf50Q9HD87 102 aa12.64□□□□□ -0.39
SKP2-202ENST00000274255 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.64□□□□□ -0.39
SKP2-202ENST00000274255 CHORDC1Q9UHD1 332 aaPredicted RBP12.64□□□□□ -0.39
SKP2-202ENST00000274255 GSTTP1A0A1W2PQM5 241 aa12.64□□□□□ -0.39
SKP2-202ENST00000274255 FAM196BA6NMK8 535 aa12.64□□□□□ -0.39
SKP2-202ENST00000274255 KIF11P52732 1056 aa12.64□□□□□ -0.39
SKP2-202ENST00000274255 MAP2K1Q02750 393 aaPredicted RBP12.64□□□□□ -0.39
SKP2-202ENST00000274255 ZYXQ15942 572 aaKnown RBP12.64□□□□□ -0.39
SKP2-202ENST00000274255 LRRC31Q6UY01 552 aa12.64□□□□□ -0.39
SKP2-202ENST00000274255 TAB3Q8N5C8 712 aaPredicted RBP12.64□□□□□ -0.39
SKP2-202ENST00000274255 TBCKQ8TEA7 893 aa12.64□□□□□ -0.39
SKP2-202ENST00000274255 CABS1Q96KC9 395 aa12.64□□□□□ -0.39
SKP2-202ENST00000274255 PIGSQ96S52 555 aa12.64□□□□□ -0.39
SKP2-202ENST00000274255 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.64□□□□□ -0.39
SKP2-202ENST00000274255 XDHP47989 1333 aa12.63□□□□□ -0.39
SKP2-202ENST00000274255 CLIC2O15247 247 aa12.63□□□□□ -0.39
SKP2-202ENST00000274255 UBXN2AP68543 259 aa12.63□□□□□ -0.39
SKP2-202ENST00000274255 NBPF9Q3BBW0 867 aa12.63□□□□□ -0.39
SKP2-202ENST00000274255 TEX11Q8IYF3 940 aa12.63□□□□□ -0.39
SKP2-202ENST00000274255 ARL8AQ96BM9 186 aa12.63□□□□□ -0.39
SKP2-202ENST00000274255 SETDB2Q96T68 719 aa12.63□□□□□ -0.39
SKP2-202ENST00000274255 ISCA1Q9BUE6 129 aa12.63□□□□□ -0.39
SKP2-202ENST00000274255 ANKARQ7Z5J8 1434 aa12.63□□□□□ -0.39
SKP2-202ENST00000274255 BICDL2A1A5D9 508 aa12.63□□□□□ -0.39
SKP2-202ENST00000274255 LRRC53A6NM62 1247 aa12.63□□□□□ -0.39
SKP2-202ENST00000274255 ADAMTS3O15072 1205 aa12.63□□□□□ -0.39
SKP2-202ENST00000274255 MECOMQ03112 1051 aa12.63□□□□□ -0.39
SKP2-202ENST00000274255 NONOQ15233 471 aaKnown RBP eCLIP12.63□□□□□ -0.39
SKP2-202ENST00000274255 DDB1Q16531 1140 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms