RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 FCHSD1Q86WN1 690 aa17.15■□□□□ 0.34
UBR3-201ENST00000272793 RDH13Q8NBN7 331 aa17.15■□□□□ 0.34
UBR3-201ENST00000272793 LRRC37BQ96QE4 947 aa17.15■□□□□ 0.34
UBR3-201ENST00000272793 A6NJR5 290 aa17.15■□□□□ 0.34
UBR3-201ENST00000272793 SUPT3HB4E1H0 165 aa17.15■□□□□ 0.34
UBR3-201ENST00000272793 CCT5P48643 541 aa17.15■□□□□ 0.34
UBR3-201ENST00000272793 CCDC152Q4G0S7 254 aa17.15■□□□□ 0.34
UBR3-201ENST00000272793 KRT27Q7Z3Y8 459 aa17.15■□□□□ 0.34
UBR3-201ENST00000272793 TMEM245Q9H330 911 aa17.15■□□□□ 0.34
UBR3-201ENST00000272793 TSKSQ9UJT2 592 aa17.15■□□□□ 0.34
UBR3-201ENST00000272793 SRGAP2BP0DMP2 458 aa17.14■□□□□ 0.34
UBR3-201ENST00000272793 FGD2Q7Z6J4 655 aa17.14■□□□□ 0.34
UBR3-201ENST00000272793 HIPK4Q8NE63 616 aa17.14■□□□□ 0.34
UBR3-201ENST00000272793 SH3GL1Q99961 368 aa17.14■□□□□ 0.34
UBR3-201ENST00000272793 LRPPRCP42704 1394 aaKnown RBP17.14■□□□□ 0.34
UBR3-201ENST00000272793 ARIH2O95376 493 aa17.14■□□□□ 0.33
UBR3-201ENST00000272793 ADAMTS2O95450 1211 aa17.14■□□□□ 0.33
UBR3-201ENST00000272793 FHDC1Q9C0D6 1143 aaPredicted RBP17.14■□□□□ 0.33
UBR3-201ENST00000272793 ANKRD50Q9ULJ7 1429 aa17.14■□□□□ 0.33
UBR3-201ENST00000272793 MAP3K10Q02779 954 aa17.14■□□□□ 0.33
UBR3-201ENST00000272793 ZKSCAN8Q15776 578 aaPredicted RBP17.14■□□□□ 0.33
UBR3-201ENST00000272793 ZNF467Q7Z7K2 595 aaPredicted RBP17.14■□□□□ 0.33
UBR3-201ENST00000272793 NLRP4Q96MN2 994 aa17.14■□□□□ 0.33
UBR3-201ENST00000272793 SFMBT2Q5VUG0 894 aa17.14■□□□□ 0.33
UBR3-201ENST00000272793 GPCPD1Q9NPB8 672 aa17.14■□□□□ 0.33
UBR3-201ENST00000272793 PI4KAP2A4QPH2 592 aa17.14■□□□□ 0.33
UBR3-201ENST00000272793 H7C0C1 242 aa17.14■□□□□ 0.33
UBR3-201ENST00000272793 ANP32DO95626 131 aa17.14■□□□□ 0.33
UBR3-201ENST00000272793 HSPD1P10809 573 aaKnown RBP17.14■□□□□ 0.33
UBR3-201ENST00000272793 ATP5OP48047 213 aa17.14■□□□□ 0.33
UBR3-201ENST00000272793 KCTD17Q8N5Z5 321 aa17.14■□□□□ 0.33
UBR3-201ENST00000272793 PI4KAP1Q8N8J0 262 aa17.14■□□□□ 0.33
UBR3-201ENST00000272793 SLF1Q9BQI6 1058 aa17.14■□□□□ 0.33
UBR3-201ENST00000272793 BRD1O95696 1058 aa17.14■□□□□ 0.33
UBR3-201ENST00000272793 KLHL30Q0D2K2 578 aa17.14■□□□□ 0.33
UBR3-201ENST00000272793 MTX1Q13505 466 aa17.14■□□□□ 0.33
UBR3-201ENST00000272793 TRIM71Q2Q1W2 868 aaKnown RBP17.14■□□□□ 0.33
UBR3-201ENST00000272793 C16orf62Q7Z3J2 963 aa17.14■□□□□ 0.33
UBR3-201ENST00000272793 COQ7Q99807 217 aa17.14■□□□□ 0.33
UBR3-201ENST00000272793 ATP8A1Q9Y2Q0 1164 aa17.14■□□□□ 0.33
UBR3-201ENST00000272793 WDR91A4D1P6 747 aa17.13■□□□□ 0.33
UBR3-201ENST00000272793 E2F4Q16254 413 aa17.13■□□□□ 0.33
UBR3-201ENST00000272793 CECR2Q9BXF3 1484 aa17.13■□□□□ 0.33
UBR3-201ENST00000272793 DTNBO60941 627 aa17.13■□□□□ 0.33
UBR3-201ENST00000272793 BFSP2Q13515 415 aa17.13■□□□□ 0.33
UBR3-201ENST00000272793 GFM2Q969S9 779 aaKnown RBP17.13■□□□□ 0.33
UBR3-201ENST00000272793 G3BP2Q9UN86 482 aaKnown RBP17.13■□□□□ 0.33
UBR3-201ENST00000272793 GUCA1CO95843 209 aa17.13■□□□□ 0.33
UBR3-201ENST00000272793 NBPF5PQ86XG9 351 aaPredicted RBP17.13■□□□□ 0.33
UBR3-201ENST00000272793 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.13■□□□□ 0.33
UBR3-201ENST00000272793 DMC1Q14565 340 aa17.13■□□□□ 0.33
UBR3-201ENST00000272793 CCDC197Q8NCU1 140 aa17.13■□□□□ 0.33
UBR3-201ENST00000272793 SLC38A10Q9HBR0 1119 aa17.13■□□□□ 0.33
UBR3-201ENST00000272793 USE1Q9NZ43 259 aa17.13■□□□□ 0.33
UBR3-201ENST00000272793 PARP1P09874 1014 aaKnown RBP17.13■□□□□ 0.33
UBR3-201ENST00000272793 PTPRCP08575 1304 aa17.13■□□□□ 0.33
UBR3-201ENST00000272793 ST13P50502 369 aaKnown RBP17.13■□□□□ 0.33
UBR3-201ENST00000272793 YWHAGP61981 247 aaKnown RBP eCLIP17.13■□□□□ 0.33
UBR3-201ENST00000272793 CUL3Q13618 768 aa17.13■□□□□ 0.33
UBR3-201ENST00000272793 KLC3Q6P597 504 aa17.13■□□□□ 0.33
UBR3-201ENST00000272793 EFCAB13Q8IY85 973 aa17.13■□□□□ 0.33
UBR3-201ENST00000272793 EDEM3Q9BZQ6 932 aa17.13■□□□□ 0.33
UBR3-201ENST00000272793 TNNC2P02585 160 aa17.12■□□□□ 0.33
UBR3-201ENST00000272793 ZNF654Q8IZM8 581 aa17.12■□□□□ 0.33
UBR3-201ENST00000272793 INTS9Q9NV88 658 aaKnown RBP17.12■□□□□ 0.33
UBR3-201ENST00000272793 L3MBTL1Q9Y468 752 aa17.12■□□□□ 0.33
UBR3-201ENST00000272793 MAGEB6Q8N7X4 407 aa17.12■□□□□ 0.33
UBR3-201ENST00000272793 DNAAF3Q8N9W5 541 aa17.12■□□□□ 0.33
UBR3-201ENST00000272793 MCM9Q9NXL9 1143 aa17.12■□□□□ 0.33
UBR3-201ENST00000272793 MOSPD1Q9UJG1 213 aa17.12■□□□□ 0.33
UBR3-201ENST00000272793 TMEM232C9JQI7 657 aa17.12■□□□□ 0.33
UBR3-201ENST00000272793 FANCCQ00597 558 aa17.12■□□□□ 0.33
UBR3-201ENST00000272793 SESTD1Q86VW0 696 aa17.12■□□□□ 0.33
UBR3-201ENST00000272793 BCL2L12Q9HB09 334 aa17.12■□□□□ 0.33
UBR3-201ENST00000272793 POLR2BP30876 1174 aaKnown RBP17.12■□□□□ 0.33
UBR3-201ENST00000272793 CEP55Q53EZ4 464 aa17.12■□□□□ 0.33
UBR3-201ENST00000272793 FAM47CQ5HY64 1035 aa17.12■□□□□ 0.33
UBR3-201ENST00000272793 DBF4Q9UBU7 674 aaPredicted RBP17.12■□□□□ 0.33
UBR3-201ENST00000272793 IVNS1ABPQ9Y6Y0 642 aa17.12■□□□□ 0.33
UBR3-201ENST00000272793 ARHGAP5Q13017 1502 aa17.12■□□□□ 0.33
UBR3-201ENST00000272793 TRIML1Q8N9V2 468 aa17.12■□□□□ 0.33
UBR3-201ENST00000272793 TTC25Q96NG3 672 aa17.12■□□□□ 0.33
UBR3-201ENST00000272793 KLHL31Q9H511 634 aa17.12■□□□□ 0.33
UBR3-201ENST00000272793 NR5A1Q13285 461 aa17.12■□□□□ 0.33
UBR3-201ENST00000272793 IMPG1Q17R60 797 aa17.12■□□□□ 0.33
UBR3-201ENST00000272793 MIGA1Q8NAN2 632 aa17.12■□□□□ 0.33
UBR3-201ENST00000272793 UBAP1Q9NZ09 502 aa17.12■□□□□ 0.33
UBR3-201ENST00000272793 JAG2Q9Y219 1238 aa17.12■□□□□ 0.33
UBR3-201ENST00000272793 TTI1O43156 1089 aa17.11■□□□□ 0.33
UBR3-201ENST00000272793 KCTD16Q68DU8 428 aa17.11■□□□□ 0.33
UBR3-201ENST00000272793 GDAP1Q8TB36 358 aa17.11■□□□□ 0.33
UBR3-201ENST00000272793 RNPEPQ9H4A4 650 aa17.11■□□□□ 0.33
UBR3-201ENST00000272793 SERPINB10P48595 397 aa17.11■□□□□ 0.33
UBR3-201ENST00000272793 ADCY1Q08828 1119 aa17.11■□□□□ 0.33
UBR3-201ENST00000272793 UNC45BQ8IWX7 931 aa17.11■□□□□ 0.33
UBR3-201ENST00000272793 DEPDC1BQ8WUY9 529 aa17.11■□□□□ 0.33
UBR3-201ENST00000272793 AZI2Q9H6S1 392 aa17.11■□□□□ 0.33
UBR3-201ENST00000272793 SLC9C2Q5TAH2 1124 aa17.11■□□□□ 0.33
UBR3-201ENST00000272793 PARVGQ9HBI0 331 aa17.11■□□□□ 0.33
UBR3-201ENST00000272793 C2CD5Q86YS7 1000 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms