RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 CUTAO60888 179 aa14.26□□□□□ -0.13
CAPN9-201ENST00000271971 PTPREP23469 700 aa14.26□□□□□ -0.13
CAPN9-201ENST00000271971 CMA1P23946 247 aa14.26□□□□□ -0.13
CAPN9-201ENST00000271971 TRAPPC10P48553 1259 aa14.26□□□□□ -0.13
CAPN9-201ENST00000271971 SPP2Q13103 211 aa14.26□□□□□ -0.13
CAPN9-201ENST00000271971 EAPPQ56P03 285 aaPredicted RBP14.26□□□□□ -0.13
CAPN9-201ENST00000271971 RIC8AQ9NPQ8 531 aa14.26□□□□□ -0.13
CAPN9-201ENST00000271971 PICK1Q9NRD5 415 aa14.26□□□□□ -0.13
CAPN9-201ENST00000271971 WDR90Q96KV7 1748 aa14.26□□□□□ -0.13
CAPN9-201ENST00000271971 PTPRAP18433 802 aa14.25□□□□□ -0.13
CAPN9-201ENST00000271971 NONOQ15233 471 aaKnown RBP eCLIP14.25□□□□□ -0.13
CAPN9-201ENST00000271971 SUPT20HL1Q3ZLR7 823 aa14.25□□□□□ -0.13
CAPN9-201ENST00000271971 CCDC174Q6PII3 467 aa14.25□□□□□ -0.13
CAPN9-201ENST00000271971 KRT25Q7Z3Z0 450 aa14.25□□□□□ -0.13
CAPN9-201ENST00000271971 FBXO11Q86XK2 927 aa14.25□□□□□ -0.13
CAPN9-201ENST00000271971 CUL5Q93034 780 aa14.25□□□□□ -0.13
CAPN9-201ENST00000271971 KIAA1683Q9H0B3 1180 aa14.25□□□□□ -0.13
CAPN9-201ENST00000271971 USP17L15C9J2P7 530 aa14.25□□□□□ -0.13
CAPN9-201ENST00000271971 USP17L13C9JLJ4 530 aa14.25□□□□□ -0.13
CAPN9-201ENST00000271971 USP17L11C9JVI0 530 aa14.25□□□□□ -0.13
CAPN9-201ENST00000271971 USP17L18D6R9N7 530 aa14.25□□□□□ -0.13
CAPN9-201ENST00000271971 USP17L22D6RA61 530 aa14.25□□□□□ -0.13
CAPN9-201ENST00000271971 USP17L17D6RBQ6 530 aa14.25□□□□□ -0.13
CAPN9-201ENST00000271971 USP17L19D6RCP7 530 aa14.25□□□□□ -0.13
CAPN9-201ENST00000271971 USP17L20D6RJB6 530 aa14.25□□□□□ -0.13
CAPN9-201ENST00000271971 KINO60870 393 aaKnown RBP14.25□□□□□ -0.13
CAPN9-201ENST00000271971 ATP2C1P98194 919 aaPredicted RBP14.25□□□□□ -0.13
CAPN9-201ENST00000271971 USP17L24Q0WX57 530 aa14.25□□□□□ -0.13
CAPN9-201ENST00000271971 RESP18Q5W5W9 173 aa14.25□□□□□ -0.13
CAPN9-201ENST00000271971 USP17L6PQ6QN14 398 aa14.25□□□□□ -0.13
CAPN9-201ENST00000271971 TBCKQ8TEA7 893 aa14.25□□□□□ -0.13
CAPN9-201ENST00000271971 ERCC4Q92889 916 aaPredicted RBP14.25□□□□□ -0.13
CAPN9-201ENST00000271971 AMNQ9BXJ7 453 aa14.25□□□□□ -0.13
CAPN9-201ENST00000271971 CSRNP2Q9H175 543 aa14.25□□□□□ -0.13
CAPN9-201ENST00000271971 PSTPIP2Q9H939 334 aa14.25□□□□□ -0.13
CAPN9-201ENST00000271971 SRPRBQ9Y5M8 271 aaKnown RBP14.25□□□□□ -0.13
CAPN9-201ENST00000271971 PTPRFP10586 1907 aa14.25□□□□□ -0.13
CAPN9-201ENST00000271971 USP2O75604 605 aaPredicted RBP14.24□□□□□ -0.13
CAPN9-201ENST00000271971 MAP3K11Q16584 847 aa14.24□□□□□ -0.13
CAPN9-201ENST00000271971 LETM2Q2VYF4 491 aa14.24□□□□□ -0.13
CAPN9-201ENST00000271971 UTP14CQ5TAP6 766 aaKnown RBP14.24□□□□□ -0.13
CAPN9-201ENST00000271971 USP49Q70CQ1 688 aa14.24□□□□□ -0.13
CAPN9-201ENST00000271971 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.24□□□□□ -0.13
CAPN9-201ENST00000271971 EMILIN3Q9NT22 766 aa14.24□□□□□ -0.13
CAPN9-201ENST00000271971 GINM1Q9NU53 330 aa14.24□□□□□ -0.13
CAPN9-201ENST00000271971 ZHX2Q9Y6X8 837 aa14.24□□□□□ -0.13
CAPN9-201ENST00000271971 POTECB2RU33 542 aa14.24□□□□□ -0.13
CAPN9-201ENST00000271971 VCAM1P19320 739 aa14.24□□□□□ -0.13
CAPN9-201ENST00000271971 USP50Q70EL3 339 aaPredicted RBP14.24□□□□□ -0.13
CAPN9-201ENST00000271971 TANGO6Q9C0B7 1094 aa14.24□□□□□ -0.13
CAPN9-201ENST00000271971 TMEM60Q9H2L4 133 aa14.24□□□□□ -0.13
CAPN9-201ENST00000271971 TAF1DQ9H5J8 278 aaPredicted RBP14.24□□□□□ -0.13
CAPN9-201ENST00000271971 ZC3H4Q9UPT8 1303 aaKnown RBP14.24□□□□□ -0.13
CAPN9-201ENST00000271971 HPSEQ9Y251 543 aa14.24□□□□□ -0.13
CAPN9-201ENST00000271971 COL11A1P12107 1806 aaPredicted RBP14.23□□□□□ -0.13
CAPN9-201ENST00000271971 VWA3AA6NCI4 1184 aa14.23□□□□□ -0.13
CAPN9-201ENST00000271971 CLK2P49760 499 aaKnown RBP14.23□□□□□ -0.13
CAPN9-201ENST00000271971 ZNF280CQ8ND82 737 aa14.23□□□□□ -0.13
CAPN9-201ENST00000271971 CHURC1Q8WUH1 139 aa14.23□□□□□ -0.13
CAPN9-201ENST00000271971 TSPY26PQ9H489 355 aa14.23□□□□□ -0.13
CAPN9-201ENST00000271971 FEM1BQ9UK73 627 aa14.23□□□□□ -0.13
CAPN9-201ENST00000271971 OPLAHO14841 1288 aa14.23□□□□□ -0.13
CAPN9-201ENST00000271971 WDR46O15213 610 aaKnown RBP14.23□□□□□ -0.13
CAPN9-201ENST00000271971 CCNT1O60563 726 aaKnown RBP14.23□□□□□ -0.13
CAPN9-201ENST00000271971 ZNF202O95125 648 aa14.23□□□□□ -0.13
CAPN9-201ENST00000271971 POTEIP0CG38 1075 aa14.23□□□□□ -0.13
CAPN9-201ENST00000271971 POTEJP0CG39 1038 aa14.23□□□□□ -0.13
CAPN9-201ENST00000271971 HMGCS2P54868 508 aa14.23□□□□□ -0.13
CAPN9-201ENST00000271971 VGLL4Q14135 290 aa14.23□□□□□ -0.13
CAPN9-201ENST00000271971 IL17AQ16552 155 aa14.23□□□□□ -0.13
CAPN9-201ENST00000271971 UVSSAQ2YD98 709 aa14.23□□□□□ -0.13
CAPN9-201ENST00000271971 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.23□□□□□ -0.13
CAPN9-201ENST00000271971 MOB2Q70IA6 237 aa14.23□□□□□ -0.13
CAPN9-201ENST00000271971 NEK8Q86SG6 692 aa14.23□□□□□ -0.13
CAPN9-201ENST00000271971 C4orf32Q8N8J7 132 aa14.23□□□□□ -0.13
CAPN9-201ENST00000271971 RNF214Q8ND24 703 aa14.23□□□□□ -0.13
CAPN9-201ENST00000271971 LPAR1Q92633 364 aa14.23□□□□□ -0.13
CAPN9-201ENST00000271971 CDCA5Q96FF9 252 aa14.23□□□□□ -0.13
CAPN9-201ENST00000271971 PRIMPOLQ96LW4 560 aa14.23□□□□□ -0.13
CAPN9-201ENST00000271971 P2RX7Q99572 595 aaKnown RBP14.23□□□□□ -0.13
CAPN9-201ENST00000271971 CCDC94Q9BW85 323 aaPredicted RBP14.23□□□□□ -0.13
CAPN9-201ENST00000271971 RANBP17Q9H2T7 1088 aaKnown RBP14.23□□□□□ -0.13
CAPN9-201ENST00000271971 PRDM10Q9NQV6 1147 aa14.23□□□□□ -0.13
CAPN9-201ENST00000271971 RLFQ13129 1914 aa14.22□□□□□ -0.13
CAPN9-201ENST00000271971 LETM1O95202 739 aaPredicted RBP14.22□□□□□ -0.13
CAPN9-201ENST00000271971 BMP15O95972 392 aa14.22□□□□□ -0.13
CAPN9-201ENST00000271971 SYKP43405 635 aa14.22□□□□□ -0.13
CAPN9-201ENST00000271971 MRPL12P52815 198 aaKnown RBP14.22□□□□□ -0.13
CAPN9-201ENST00000271971 BACE1P56817 501 aa14.22□□□□□ -0.13
CAPN9-201ENST00000271971 FAM160B2Q86V87 743 aa14.22□□□□□ -0.13
CAPN9-201ENST00000271971 MYRIPQ8NFW9 859 aa14.22□□□□□ -0.13
CAPN9-201ENST00000271971 CNKSR2Q8WXI2 1034 aa14.22□□□□□ -0.13
CAPN9-201ENST00000271971 FUCA2Q9BTY2 467 aa14.22□□□□□ -0.13
CAPN9-201ENST00000271971 WDR18Q9BV38 432 aa14.22□□□□□ -0.13
CAPN9-201ENST00000271971 RPAP3Q9H6T3 665 aaPredicted RBP14.22□□□□□ -0.13
CAPN9-201ENST00000271971 SNCAIPQ9Y6H5 919 aa14.22□□□□□ -0.13
CAPN9-201ENST00000271971 A0A0U1RQG5 324 aaPredicted RBP14.22□□□□□ -0.13
CAPN9-201ENST00000271971 EDIL3O43854 480 aa14.22□□□□□ -0.13
CAPN9-201ENST00000271971 RBM43Q6ZSC3 357 aaKnown RBP14.22□□□□□ -0.13
CAPN9-201ENST00000271971 EPSTI1Q96J88 318 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms