RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 A0A1B0GVL5 298 aa17.52■□□□□ 0.4
COPS3-201ENST00000268717 FAM205CA6NFA0 338 aa17.52■□□□□ 0.4
COPS3-201ENST00000268717 F5H6K3 240 aa17.52■□□□□ 0.4
COPS3-201ENST00000268717 ZBTB5O15062 677 aa17.52■□□□□ 0.4
COPS3-201ENST00000268717 ZBTB48P10074 688 aaPredicted RBP17.52■□□□□ 0.4
COPS3-201ENST00000268717 MAP3K9P80192 1104 aa17.52■□□□□ 0.4
COPS3-201ENST00000268717 ATP2C1P98194 919 aaPredicted RBP17.52■□□□□ 0.4
COPS3-201ENST00000268717 KLRC3Q07444 240 aa17.52■□□□□ 0.4
COPS3-201ENST00000268717 UVSSAQ2YD98 709 aa17.52■□□□□ 0.4
COPS3-201ENST00000268717 BTNL9Q6UXG8 535 aa17.52■□□□□ 0.4
COPS3-201ENST00000268717 WNK4Q96J92 1243 aa17.52■□□□□ 0.4
COPS3-201ENST00000268717 GLT8D2Q9H1C3 349 aa17.52■□□□□ 0.4
COPS3-201ENST00000268717 TSKSQ9UJT2 592 aa17.52■□□□□ 0.4
COPS3-201ENST00000268717 TMX2Q9Y320 296 aa17.52■□□□□ 0.4
COPS3-201ENST00000268717 CASP8AP2Q9UKL3 1982 aa17.52■□□□□ 0.39
COPS3-201ENST00000268717 SMCO2A6NFE2 343 aa17.51■□□□□ 0.39
COPS3-201ENST00000268717 NDUFB10O96000 172 aa17.51■□□□□ 0.39
COPS3-201ENST00000268717 CAP2P40123 477 aa17.51■□□□□ 0.39
COPS3-201ENST00000268717 CAMK4Q16566 473 aa17.51■□□□□ 0.39
COPS3-201ENST00000268717 ARL6IP4Q66PJ3 421 aaKnown RBP17.51■□□□□ 0.39
COPS3-201ENST00000268717 TEX2Q8IWB9 1127 aa17.51■□□□□ 0.39
COPS3-201ENST00000268717 SAGE1Q9NXZ1 904 aa17.51■□□□□ 0.39
COPS3-201ENST00000268717 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.51■□□□□ 0.39
COPS3-201ENST00000268717 ZNF202O95125 648 aa17.5■□□□□ 0.39
COPS3-201ENST00000268717 ASNSP08243 561 aa17.5■□□□□ 0.39
COPS3-201ENST00000268717 SYKP43405 635 aa17.5■□□□□ 0.39
COPS3-201ENST00000268717 TYRO3Q06418 890 aa17.5■□□□□ 0.39
COPS3-201ENST00000268717 VGLL4Q14135 290 aa17.5■□□□□ 0.39
COPS3-201ENST00000268717 KCTD1Q719H9 257 aa17.5■□□□□ 0.39
COPS3-201ENST00000268717 MIGA2Q7L4E1 593 aa17.5■□□□□ 0.39
COPS3-201ENST00000268717 ANP32BQ92688 251 aaKnown RBP17.5■□□□□ 0.39
COPS3-201ENST00000268717 WRNIP1Q96S55 665 aa17.5■□□□□ 0.39
COPS3-201ENST00000268717 ELP3Q9H9T3 547 aa17.5■□□□□ 0.39
COPS3-201ENST00000268717 VAT1LQ9HCJ6 419 aa17.5■□□□□ 0.39
COPS3-201ENST00000268717 GOPCQ9HD26 462 aa17.5■□□□□ 0.39
COPS3-201ENST00000268717 RNF186Q9NXI6 227 aa17.5■□□□□ 0.39
COPS3-201ENST00000268717 FAM13BQ9NYF5 915 aa17.5■□□□□ 0.39
COPS3-201ENST00000268717 LAD1O00515 517 aa17.5■□□□□ 0.39
COPS3-201ENST00000268717 BMP3P12645 472 aa17.5■□□□□ 0.39
COPS3-201ENST00000268717 GJA5P36382 358 aa17.5■□□□□ 0.39
COPS3-201ENST00000268717 TM4SF4P48230 202 aa17.5■□□□□ 0.39
COPS3-201ENST00000268717 TTBK2Q6IQ55 1244 aa17.5■□□□□ 0.39
COPS3-201ENST00000268717 REXO1Q8N1G1 1221 aaKnown RBP17.5■□□□□ 0.39
COPS3-201ENST00000268717 ZNF341Q9BYN7 854 aa17.5■□□□□ 0.39
COPS3-201ENST00000268717 CSADQ9Y600 493 aa17.5■□□□□ 0.39
COPS3-201ENST00000268717 A0A1W2PRG0 241 aa17.49■□□□□ 0.39
COPS3-201ENST00000268717 ADAMTS3O15072 1205 aa17.49■□□□□ 0.39
COPS3-201ENST00000268717 PLA2G6O60733 806 aa17.49■□□□□ 0.39
COPS3-201ENST00000268717 TRPA1O75762 1119 aa17.49■□□□□ 0.39
COPS3-201ENST00000268717 ADCY7P51828 1080 aa17.49■□□□□ 0.39
COPS3-201ENST00000268717 SREBF2Q12772 1141 aa17.49■□□□□ 0.39
COPS3-201ENST00000268717 NONOQ15233 471 aaKnown RBP eCLIP17.49■□□□□ 0.39
COPS3-201ENST00000268717 NOM1Q5C9Z4 860 aaKnown RBP17.49■□□□□ 0.39
COPS3-201ENST00000268717 SASS6Q6UVJ0 657 aa17.49■□□□□ 0.39
COPS3-201ENST00000268717 OPTNQ96CV9 577 aa17.49■□□□□ 0.39
COPS3-201ENST00000268717 CLIC6Q96NY7 704 aa17.49■□□□□ 0.39
COPS3-201ENST00000268717 RIC8AQ9NPQ8 531 aa17.49■□□□□ 0.39
COPS3-201ENST00000268717 PHF20L1A8MW92 1017 aa17.48■□□□□ 0.39
COPS3-201ENST00000268717 TRAF1Q13077 416 aa17.48■□□□□ 0.39
COPS3-201ENST00000268717 CKAP2LQ8IYA6 745 aa17.48■□□□□ 0.39
COPS3-201ENST00000268717 ZKSCAN4Q969J2 545 aaPredicted RBP17.48■□□□□ 0.39
COPS3-201ENST00000268717 SDF4Q9BRK5 362 aa17.48■□□□□ 0.39
COPS3-201ENST00000268717 ZNF112Q9UJU3 913 aa17.48■□□□□ 0.39
COPS3-201ENST00000268717 KCNH3Q9ULD8 1083 aa17.48■□□□□ 0.39
COPS3-201ENST00000268717 MANSC4A6NHS7 340 aaPredicted RBP17.47■□□□□ 0.39
COPS3-201ENST00000268717 USP17L10C9JJH3 530 aa17.47■□□□□ 0.39
COPS3-201ENST00000268717 ATP2B1P20020 1258 aa17.47■□□□□ 0.39
COPS3-201ENST00000268717 PTGDRQ13258 359 aa17.47■□□□□ 0.39
COPS3-201ENST00000268717 ZNF174Q15697 407 aa17.47■□□□□ 0.39
COPS3-201ENST00000268717 MCTP2Q6DN12 878 aa17.47■□□□□ 0.39
COPS3-201ENST00000268717 FAM200AQ8TCP9 573 aa17.47■□□□□ 0.39
COPS3-201ENST00000268717 PYM1Q9BRP8 204 aaKnown RBP17.47■□□□□ 0.39
COPS3-201ENST00000268717 PANK2Q9BZ23 570 aa17.47■□□□□ 0.39
COPS3-201ENST00000268717 VCPKMTQ9H867 229 aa17.47■□□□□ 0.39
COPS3-201ENST00000268717 MRVI1Q9Y6F6 885 aa17.47■□□□□ 0.39
COPS3-201ENST00000268717 SNCAIPQ9Y6H5 919 aa17.47■□□□□ 0.39
COPS3-201ENST00000268717 WNT7AO00755 349 aa17.47■□□□□ 0.39
COPS3-201ENST00000268717 CTNND1O60716 968 aaKnown RBP17.47■□□□□ 0.39
COPS3-201ENST00000268717 PPP1R11O60927 126 aaPredicted RBP17.47■□□□□ 0.39
COPS3-201ENST00000268717 INPP5BP32019 993 aa17.47■□□□□ 0.39
COPS3-201ENST00000268717 PRPHP41219 470 aa17.47■□□□□ 0.39
COPS3-201ENST00000268717 MRPL12P52815 198 aaKnown RBP17.47■□□□□ 0.39
COPS3-201ENST00000268717 INHBEP58166 350 aa17.47■□□□□ 0.39
COPS3-201ENST00000268717 QRICH1Q2TAL8 776 aa17.47■□□□□ 0.39
COPS3-201ENST00000268717 SYDE2Q5VT97 1194 aa17.47■□□□□ 0.39
COPS3-201ENST00000268717 C4orf32Q8N8J7 132 aa17.47■□□□□ 0.39
COPS3-201ENST00000268717 RASGRP4Q8TDF6 673 aa17.47■□□□□ 0.39
COPS3-201ENST00000268717 CNKSR2Q8WXI2 1034 aa17.47■□□□□ 0.39
COPS3-201ENST00000268717 CUL5Q93034 780 aa17.47■□□□□ 0.39
COPS3-201ENST00000268717 SPDYE5A6NIY4 337 aa17.46■□□□□ 0.39
COPS3-201ENST00000268717 SLC16A2P36021 539 aa17.46■□□□□ 0.39
COPS3-201ENST00000268717 CLK2P49760 499 aaKnown RBP17.46■□□□□ 0.39
COPS3-201ENST00000268717 CCDC173Q0VFZ6 552 aa17.46■□□□□ 0.39
COPS3-201ENST00000268717 CDC37Q16543 378 aaPredicted RBP17.46■□□□□ 0.39
COPS3-201ENST00000268717 STX1AQ16623 288 aa17.46■□□□□ 0.39
COPS3-201ENST00000268717 COA7Q96BR5 231 aa17.46■□□□□ 0.39
COPS3-201ENST00000268717 CSRNP2Q9H175 543 aa17.46■□□□□ 0.39
COPS3-201ENST00000268717 KIAA1468Q9P260 1216 aa17.46■□□□□ 0.39
COPS3-201ENST00000268717 USP25Q9UHP3 1055 aa17.46■□□□□ 0.39
COPS3-201ENST00000268717 HOOK1Q9UJC3 728 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms