RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 SDR42E1Q8WUS8 393 aa16.59■□□□□ 0.25
CASC3-201ENST00000264645 ANKZF1Q9H8Y5 726 aa16.59■□□□□ 0.25
CASC3-201ENST00000264645 SLC52A2Q9HAB3 445 aa16.59■□□□□ 0.25
CASC3-201ENST00000264645 SALL3Q9BXA9 1300 aa16.58■□□□□ 0.25
CASC3-201ENST00000264645 LRRIQ1Q96JM4 1722 aa16.58■□□□□ 0.25
CASC3-201ENST00000264645 SEMA3EO15041 775 aa16.58■□□□□ 0.25
CASC3-201ENST00000264645 PLTPP55058 493 aa16.58■□□□□ 0.25
CASC3-201ENST00000264645 CUL4BQ13620 913 aa16.58■□□□□ 0.25
CASC3-201ENST00000264645 FAM47AQ5JRC9 791 aa16.58■□□□□ 0.25
CASC3-201ENST00000264645 TTLL7Q6ZT98 887 aa16.58■□□□□ 0.25
CASC3-201ENST00000264645 HAUS2Q9NVX0 235 aa16.58■□□□□ 0.25
CASC3-201ENST00000264645 MED23Q9ULK4 1368 aa16.58■□□□□ 0.24
CASC3-201ENST00000264645 TARSL2A2RTX5 802 aaKnown RBP16.58■□□□□ 0.24
CASC3-201ENST00000264645 EEF2P13639 858 aaKnown RBP16.58■□□□□ 0.24
CASC3-201ENST00000264645 FDPSP14324 419 aaKnown RBP16.58■□□□□ 0.24
CASC3-201ENST00000264645 NCAPHQ15003 741 aa16.58■□□□□ 0.24
CASC3-201ENST00000264645 NBPF9Q3BBW0 867 aa16.58■□□□□ 0.24
CASC3-201ENST00000264645 SYCE1Q8N0S2 351 aa16.58■□□□□ 0.24
CASC3-201ENST00000264645 ASXL2Q76L83 1435 aa16.58■□□□□ 0.24
CASC3-201ENST00000264645 MROH7-TTC4A0A0A0MT08 1334 aa16.58■□□□□ 0.24
CASC3-201ENST00000264645 ENO4A6NNW6 628 aa16.58■□□□□ 0.24
CASC3-201ENST00000264645 GNPTABQ3T906 1256 aa16.58■□□□□ 0.24
CASC3-201ENST00000264645 ZNF473Q8WTR7 871 aaKnown RBP16.58■□□□□ 0.24
CASC3-201ENST00000264645 P2RX5Q93086 422 aa16.58■□□□□ 0.24
CASC3-201ENST00000264645 RRP36Q96EU6 259 aaKnown RBP16.58■□□□□ 0.24
CASC3-201ENST00000264645 OSBPL9Q96SU4 736 aa16.58■□□□□ 0.24
CASC3-201ENST00000264645 ATP2A1O14983 1001 aa16.57■□□□□ 0.24
CASC3-201ENST00000264645 BRD2P25440 801 aaKnown RBP16.57■□□□□ 0.24
CASC3-201ENST00000264645 TECP42680 631 aa16.57■□□□□ 0.24
CASC3-201ENST00000264645 VPS41P49754 854 aa16.57■□□□□ 0.24
CASC3-201ENST00000264645 EXOSC10Q01780 885 aaKnown RBP16.57■□□□□ 0.24
CASC3-201ENST00000264645 SPATA5Q8NB90 893 aa16.57■□□□□ 0.24
CASC3-201ENST00000264645 RASGRP4Q8TDF6 673 aa16.57■□□□□ 0.24
CASC3-201ENST00000264645 KRT15P19012 456 aa16.57■□□□□ 0.24
CASC3-201ENST00000264645 CDC27P30260 824 aa16.57■□□□□ 0.24
CASC3-201ENST00000264645 LSP1P33241 339 aa16.57■□□□□ 0.24
CASC3-201ENST00000264645 MSANTD4Q8NCY6 345 aa16.57■□□□□ 0.24
CASC3-201ENST00000264645 GPKOWQ92917 476 aaPredicted RBP eCLIP16.57■□□□□ 0.245e-7■■■■□ 23.9
CASC3-201ENST00000264645 RAB3IPQ96QF0 476 aaPredicted RBP16.57■□□□□ 0.24
CASC3-201ENST00000264645 RNF14Q9UBS8 474 aa16.57■□□□□ 0.24
CASC3-201ENST00000264645 MAGOHP61326 146 aaKnown RBP16.57■□□□□ 0.24
CASC3-201ENST00000264645 USP49Q70CQ1 688 aa16.57■□□□□ 0.24
CASC3-201ENST00000264645 HS2ST1Q7LGA3 356 aa16.57■□□□□ 0.24
CASC3-201ENST00000264645 BLIDQ8IZY5 108 aa16.57■□□□□ 0.24
CASC3-201ENST00000264645 ERMNQ8TAM6 284 aa16.57■□□□□ 0.24
CASC3-201ENST00000264645 MAGOHBQ96A72 148 aaKnown RBP16.57■□□□□ 0.24
CASC3-201ENST00000264645 ANKIB1Q9P2G1 1089 aa16.57■□□□□ 0.24
CASC3-201ENST00000264645 ADD3Q9UEY8 706 aaKnown RBP16.57■□□□□ 0.24
CASC3-201ENST00000264645 MAP3K4Q9Y6R4 1608 aa16.57■□□□□ 0.24
CASC3-201ENST00000264645 IGKV5-2P06315 115 aa16.56■□□□□ 0.24
CASC3-201ENST00000264645 H2AFZP0C0S5 128 aa16.56■□□□□ 0.24
CASC3-201ENST00000264645 PUM3Q15397 648 aaKnown RBP16.56■□□□□ 0.24
CASC3-201ENST00000264645 CCDC152Q4G0S7 254 aa16.56■□□□□ 0.24
CASC3-201ENST00000264645 H2AFVQ71UI9 128 aa16.56■□□□□ 0.24
CASC3-201ENST00000264645 KIRREL3Q8IZU9 778 aa16.56■□□□□ 0.24
CASC3-201ENST00000264645 UBL4BQ8N7F7 174 aa16.56■□□□□ 0.24
CASC3-201ENST00000264645 DDX12PQ92771 950 aa16.56■□□□□ 0.24
CASC3-201ENST00000264645 ATP6V1G3Q96LB4 118 aa16.56■□□□□ 0.24
CASC3-201ENST00000264645 CLTCL1P53675 1640 aa16.56■□□□□ 0.24
CASC3-201ENST00000264645 LGALS16A8MUM7 142 aa16.56■□□□□ 0.24
CASC3-201ENST00000264645 RPL13P26373 211 aaKnown RBP16.56■□□□□ 0.24
CASC3-201ENST00000264645 NONOQ15233 471 aaKnown RBP eCLIP16.56■□□□□ 0.24
CASC3-201ENST00000264645 CAPRIN2Q6IMN6 1127 aaKnown RBP16.56■□□□□ 0.24
CASC3-201ENST00000264645 STXBP4Q6ZWJ1 553 aa16.56■□□□□ 0.24
CASC3-201ENST00000264645 EPN3Q9H201 632 aa16.56■□□□□ 0.24
CASC3-201ENST00000264645 ADAMTS1Q9UHI8 967 aa16.56■□□□□ 0.24
CASC3-201ENST00000264645 IQGAP3Q86VI3 1631 aa16.56■□□□□ 0.24
CASC3-201ENST00000264645 BAG3O95817 575 aa16.56■□□□□ 0.24
CASC3-201ENST00000264645 RASSF2P50749 326 aa16.56■□□□□ 0.24
CASC3-201ENST00000264645 UAP1Q16222 522 aaPredicted RBP16.56■□□□□ 0.24
CASC3-201ENST00000264645 OXER1Q8TDS5 423 aa16.56■□□□□ 0.24
CASC3-201ENST00000264645 TEX13AQ9BXU3 409 aaPredicted RBP16.56■□□□□ 0.24
CASC3-201ENST00000264645 AATFQ9NY61 560 aaKnown RBP eCLIP16.56■□□□□ 0.24
CASC3-201ENST00000264645 SMARCAL1Q9NZC9 954 aa16.56■□□□□ 0.24
CASC3-201ENST00000264645 LAMC1P11047 1609 aa16.56■□□□□ 0.24
CASC3-201ENST00000264645 GYPCP04921 128 aa16.55■□□□□ 0.24
CASC3-201ENST00000264645 FYB2Q5VWT5 728 aa16.55■□□□□ 0.24
CASC3-201ENST00000264645 DZIP3Q86Y13 1208 aaKnown RBP16.55■□□□□ 0.24
CASC3-201ENST00000264645 IL17RAQ96F46 866 aa16.55■□□□□ 0.24
CASC3-201ENST00000264645 TSC22D3Q99576 134 aa16.55■□□□□ 0.24
CASC3-201ENST00000264645 LONP1P36776 959 aaKnown RBP16.55■□□□□ 0.24
CASC3-201ENST00000264645 PRCPP42785 496 aa16.55■□□□□ 0.24
CASC3-201ENST00000264645 TMEM132AQ24JP5 1023 aa16.55■□□□□ 0.24
CASC3-201ENST00000264645 HHATQ5VTY9 493 aa16.55■□□□□ 0.24
CASC3-201ENST00000264645 ZNF365Q70YC5 407 aa16.55■□□□□ 0.24
CASC3-201ENST00000264645 KCNV2Q8TDN2 545 aa16.55■□□□□ 0.24
CASC3-201ENST00000264645 RNF26Q9BY78 433 aaPredicted RBP16.55■□□□□ 0.24
CASC3-201ENST00000264645 PLEKHG2Q9H7P9 1386 aa16.55■□□□□ 0.24
CASC3-201ENST00000264645 ATP7BP35670 1465 aa16.55■□□□□ 0.24
CASC3-201ENST00000264645 PRR36Q9H6K5 1346 aa16.55■□□□□ 0.24
CASC3-201ENST00000264645 PGRMC1O00264 195 aaKnown RBP16.55■□□□□ 0.24
CASC3-201ENST00000264645 TXNDC9O14530 226 aa16.55■□□□□ 0.24
CASC3-201ENST00000264645 SCG2P13521 617 aa16.55■□□□□ 0.24
CASC3-201ENST00000264645 PLS1Q14651 629 aa16.55■□□□□ 0.24
CASC3-201ENST00000264645 LLGL1Q15334 1064 aa16.55■□□□□ 0.24
CASC3-201ENST00000264645 USPL1Q5W0Q7 1092 aa16.55■□□□□ 0.24
CASC3-201ENST00000264645 CRACR2BQ8N4Y2 399 aaPredicted RBP16.55■□□□□ 0.24
CASC3-201ENST00000264645 DHTKD1Q96HY7 919 aaPredicted RBP16.55■□□□□ 0.24
CASC3-201ENST00000264645 ZBTB12Q9Y330 459 aaPredicted RBP16.55■□□□□ 0.24
CASC3-201ENST00000264645 FAM114A2Q9NRY5 505 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms