RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 TMEM260Q9NX78 707 aa9.46□□□□□ -0.89
COPS4-201ENST00000264389 ZNF112Q9UJU3 913 aa9.46□□□□□ -0.89
COPS4-201ENST00000264389 FEM1BQ9UK73 627 aa9.46□□□□□ -0.89
COPS4-201ENST00000264389 ADM5C9JUS6 153 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 CCDC192P0DO97 292 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 EPHX2P34913 555 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 SYKP43405 635 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 USP14P54578 494 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 SNAP25P60880 206 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 TRAF1Q13077 416 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 PTGDRQ13258 359 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 MTMR2Q13614 643 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 UBE2SQ16763 222 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 RBM43Q6ZSC3 357 aaKnown RBP9.45□□□□□ -0.9
COPS4-201ENST00000264389 USP50Q70EL3 339 aaPredicted RBP9.45□□□□□ -0.9
COPS4-201ENST00000264389 NEK8Q86SG6 692 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 CKAP2LQ8IYA6 745 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 ZNF579Q8NAF0 562 aaKnown RBP9.45□□□□□ -0.9
COPS4-201ENST00000264389 TBCKQ8TEA7 893 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 KIFC2Q96AC6 838 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 KIAA1683Q9H0B3 1180 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 PSTPIP2Q9H939 334 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 FZD1Q9UP38 647 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 HPSEQ9Y251 543 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 MRVI1Q9Y6F6 885 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 FAM237AA0A1B0GTK4 181 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 VWA3AA6NCI4 1184 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 GLTPD2A6NH11 291 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 PLA2G6O60733 806 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 ZNF202O95125 648 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 CLK2P49760 499 aaKnown RBP9.45□□□□□ -0.9
COPS4-201ENST00000264389 GRIN1Q05586 938 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 ORC2Q13416 577 aaPredicted RBP9.45□□□□□ -0.9
COPS4-201ENST00000264389 LETM2Q2VYF4 491 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 NOL9Q5SY16 702 aaKnown RBP9.45□□□□□ -0.9
COPS4-201ENST00000264389 ZKSCAN4Q969J2 545 aaPredicted RBP9.45□□□□□ -0.9
COPS4-201ENST00000264389 KLRG1Q96E93 195 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 CSRNP2Q9H175 543 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 RANBP17Q9H2T7 1088 aaKnown RBP9.45□□□□□ -0.9
COPS4-201ENST00000264389 A0A0G2JMZ2 1700 aa9.45□□□□□ -0.9
COPS4-201ENST00000264389 IQCA1LA6NCM1 817 aa9.44□□□□□ -0.9
COPS4-201ENST00000264389 LAD1O00515 517 aa9.44□□□□□ -0.9
COPS4-201ENST00000264389 CCNT1O60563 726 aaKnown RBP9.44□□□□□ -0.9
COPS4-201ENST00000264389 PTPRAP18433 802 aa9.44□□□□□ -0.9
COPS4-201ENST00000264389 AP3B2Q13367 1082 aa9.44□□□□□ -0.9
COPS4-201ENST00000264389 PRKG1Q13976 671 aa9.44□□□□□ -0.9
COPS4-201ENST00000264389 SPECC1Q5M775 1068 aa9.44□□□□□ -0.9
COPS4-201ENST00000264389 ARL6IP4Q66PJ3 421 aaKnown RBP9.44□□□□□ -0.9
COPS4-201ENST00000264389 CCDC174Q6PII3 467 aa9.44□□□□□ -0.9
COPS4-201ENST00000264389 SASS6Q6UVJ0 657 aa9.44□□□□□ -0.9
COPS4-201ENST00000264389 KRT26Q7Z3Y9 468 aa9.44□□□□□ -0.9
COPS4-201ENST00000264389 ZNF280CQ8ND82 737 aa9.44□□□□□ -0.9
COPS4-201ENST00000264389 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.44□□□□□ -0.9
COPS4-201ENST00000264389 SLF1Q9BQI6 1058 aa9.44□□□□□ -0.9
COPS4-201ENST00000264389 SDF4Q9BRK5 362 aa9.44□□□□□ -0.9
COPS4-201ENST00000264389 FUCA2Q9BTY2 467 aa9.44□□□□□ -0.9
COPS4-201ENST00000264389 WDR18Q9BV38 432 aa9.44□□□□□ -0.9
COPS4-201ENST00000264389 TANGO6Q9C0B7 1094 aa9.44□□□□□ -0.9
COPS4-201ENST00000264389 KCNH3Q9ULD8 1083 aa9.44□□□□□ -0.9
COPS4-201ENST00000264389 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.43□□□□□ -0.9
COPS4-201ENST00000264389 NEMFO60524 1076 aa9.43□□□□□ -0.9
COPS4-201ENST00000264389 OR52Z1P0C646 297 aa9.43□□□□□ -0.9
COPS4-201ENST00000264389 VCAM1P19320 739 aa9.43□□□□□ -0.9
COPS4-201ENST00000264389 NF2P35240 595 aa9.43□□□□□ -0.9
COPS4-201ENST00000264389 TYRO3Q06418 890 aa9.43□□□□□ -0.9
COPS4-201ENST00000264389 SPP2Q13103 211 aa9.43□□□□□ -0.9
COPS4-201ENST00000264389 EAPPQ56P03 285 aaPredicted RBP9.43□□□□□ -0.9
COPS4-201ENST00000264389 MCTP2Q6DN12 878 aa9.43□□□□□ -0.9
COPS4-201ENST00000264389 ZC3H15Q8WU90 426 aaKnown RBP9.43□□□□□ -0.9
COPS4-201ENST00000264389 TIGD1Q96MW7 591 aa9.43□□□□□ -0.9
COPS4-201ENST00000264389 ANO3Q9BYT9 981 aa9.43□□□□□ -0.9
COPS4-201ENST00000264389 RBSNQ9H1K0 784 aa9.43□□□□□ -0.9
COPS4-201ENST00000264389 FBXO28Q9NVF7 368 aa9.43□□□□□ -0.9
COPS4-201ENST00000264389 ABCB11O95342 1321 aa9.43□□□□□ -0.9
COPS4-201ENST00000264389 USP17L15C9J2P7 530 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 USP17L13C9JLJ4 530 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 USP17L11C9JVI0 530 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 USP17L18D6R9N7 530 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 USP17L22D6RA61 530 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 USP17L17D6RBQ6 530 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 USP17L19D6RCP7 530 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 USP17L20D6RJB6 530 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 PPP1R12BO60237 982 aaPredicted RBP9.42□□□□□ -0.9
COPS4-201ENST00000264389 TAL1P17542 331 aaPredicted RBP9.42□□□□□ -0.9
COPS4-201ENST00000264389 TXLNAP40222 546 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 PRPHP41219 470 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 IREB2P48200 963 aaKnown RBP9.42□□□□□ -0.9
COPS4-201ENST00000264389 BACE1P56817 501 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 USP17L24Q0WX57 530 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 DGKZQ13574 1117 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 USP17L6PQ6QN14 398 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 RNF214Q8ND24 703 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 SYMPKQ92797 1274 aaKnown RBP9.42□□□□□ -0.9
COPS4-201ENST00000264389 CDCA5Q96FF9 252 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 NAP1L4Q99733 375 aaKnown RBP9.42□□□□□ -0.9
COPS4-201ENST00000264389 RPAP3Q9H6T3 665 aaPredicted RBP9.42□□□□□ -0.9
COPS4-201ENST00000264389 CSADQ9Y600 493 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 ZHX2Q9Y6X8 837 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 SPDYE3A6NKU9 549 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 C19orf81C9J6K1 198 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms