RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 ZNF579Q8NAF0 562 aaKnown RBP26.1■■□□□ 1.77
SMARCB1-201ENST00000263121 RPAP3Q9H6T3 665 aaPredicted RBP26.1■■□□□ 1.77
SMARCB1-201ENST00000263121 PARP14Q460N5 1801 aa26.1■■□□□ 1.77
SMARCB1-201ENST00000263121 A0A1B0GVL5 298 aa26.09■■□□□ 1.77
SMARCB1-201ENST00000263121 LETM1O95202 739 aaPredicted RBP26.09■■□□□ 1.77
SMARCB1-201ENST00000263121 NEK8Q86SG6 692 aa26.09■■□□□ 1.77
SMARCB1-201ENST00000263121 FMR1NBQ8N0W7 255 aaPredicted RBP26.09■■□□□ 1.77
SMARCB1-201ENST00000263121 C4orf32Q8N8J7 132 aa26.09■■□□□ 1.77
SMARCB1-201ENST00000263121 TBCKQ8TEA7 893 aa26.09■■□□□ 1.77
SMARCB1-201ENST00000263121 TANGO6Q9C0B7 1094 aa26.09■■□□□ 1.77
SMARCB1-201ENST00000263121 NUP62CLQ9H1M0 184 aa26.09■■□□□ 1.77
SMARCB1-201ENST00000263121 CLSTN2Q9H4D0 955 aa26.09■■□□□ 1.77
SMARCB1-201ENST00000263121 OPLAHO14841 1288 aa26.09■■□□□ 1.77
SMARCB1-201ENST00000263121 POTEIP0CG38 1075 aa26.09■■□□□ 1.77
SMARCB1-201ENST00000263121 POTEJP0CG39 1038 aa26.09■■□□□ 1.77
SMARCB1-201ENST00000263121 TAL1P17542 331 aaPredicted RBP26.09■■□□□ 1.77
SMARCB1-201ENST00000263121 NDUFA8P51970 172 aa26.09■■□□□ 1.77
SMARCB1-201ENST00000263121 HMGCS2P54868 508 aa26.09■■□□□ 1.77
SMARCB1-201ENST00000263121 GRIN1Q05586 938 aa26.09■■□□□ 1.77
SMARCB1-201ENST00000263121 SH3D19Q5HYK7 790 aa26.09■■□□□ 1.77
SMARCB1-201ENST00000263121 CCDC174Q6PII3 467 aa26.09■■□□□ 1.77
SMARCB1-201ENST00000263121 TEX2Q8IWB9 1127 aa26.09■■□□□ 1.77
SMARCB1-201ENST00000263121 FERMT2Q96AC1 680 aa26.09■■□□□ 1.77
SMARCB1-201ENST00000263121 HPSEQ9Y251 543 aa26.09■■□□□ 1.77
SMARCB1-201ENST00000263121 MEIS2O14770 477 aa26.08■■□□□ 1.77
SMARCB1-201ENST00000263121 PFKFB1P16118 471 aa26.08■■□□□ 1.77
SMARCB1-201ENST00000263121 PPP1R9AQ9ULJ8 1098 aa26.08■■□□□ 1.77
SMARCB1-201ENST00000263121 USP17L15C9J2P7 530 aa26.07■■□□□ 1.76
SMARCB1-201ENST00000263121 USP17L13C9JLJ4 530 aa26.07■■□□□ 1.76
SMARCB1-201ENST00000263121 USP17L11C9JVI0 530 aa26.07■■□□□ 1.76
SMARCB1-201ENST00000263121 USP17L18D6R9N7 530 aa26.07■■□□□ 1.76
SMARCB1-201ENST00000263121 USP17L22D6RA61 530 aa26.07■■□□□ 1.76
SMARCB1-201ENST00000263121 USP17L17D6RBQ6 530 aa26.07■■□□□ 1.76
SMARCB1-201ENST00000263121 USP17L19D6RCP7 530 aa26.07■■□□□ 1.76
SMARCB1-201ENST00000263121 USP17L20D6RJB6 530 aa26.07■■□□□ 1.76
SMARCB1-201ENST00000263121 USP17L24Q0WX57 530 aa26.07■■□□□ 1.76
SMARCB1-201ENST00000263121 ORC2Q13416 577 aaPredicted RBP26.07■■□□□ 1.76
SMARCB1-201ENST00000263121 USP17L6PQ6QN14 398 aa26.07■■□□□ 1.76
SMARCB1-201ENST00000263121 ANKRD13AQ8IZ07 590 aa26.07■■□□□ 1.76
SMARCB1-201ENST00000263121 RBM46Q8TBY0 533 aaKnown RBP26.07■■□□□ 1.76
SMARCB1-201ENST00000263121 CLEC11AQ9Y240 323 aa26.07■■□□□ 1.76
SMARCB1-201ENST00000263121 FLOT1O75955 427 aa26.06■■□□□ 1.76
SMARCB1-201ENST00000263121 MCTP2Q6DN12 878 aa26.06■■□□□ 1.76
SMARCB1-201ENST00000263121 LRSAM1Q6UWE0 723 aa26.06■■□□□ 1.76
SMARCB1-201ENST00000263121 GAS2L3Q86XJ1 694 aa26.06■■□□□ 1.76
SMARCB1-201ENST00000263121 ZNF536O15090 1300 aa26.06■■□□□ 1.76
SMARCB1-201ENST00000263121 PTPRFP10586 1907 aa26.06■■□□□ 1.76
SMARCB1-201ENST00000263121 FSD2A1L4K1 749 aa26.06■■□□□ 1.76
SMARCB1-201ENST00000263121 EDIL3O43854 480 aa26.06■■□□□ 1.76
SMARCB1-201ENST00000263121 ICAM1P05362 532 aa26.06■■□□□ 1.76
SMARCB1-201ENST00000263121 AP3B2Q13367 1082 aa26.06■■□□□ 1.76
SMARCB1-201ENST00000263121 LETM2Q2VYF4 491 aa26.06■■□□□ 1.76
SMARCB1-201ENST00000263121 ARL6IP4Q66PJ3 421 aaKnown RBP26.06■■□□□ 1.76
SMARCB1-201ENST00000263121 SAMD1Q6SPF0 538 aaPredicted RBP26.06■■□□□ 1.76
SMARCB1-201ENST00000263121 MOB2Q70IA6 237 aa26.06■■□□□ 1.76
SMARCB1-201ENST00000263121 LDHDQ86WU2 507 aa26.06■■□□□ 1.76
SMARCB1-201ENST00000263121 SLC38A10Q9HBR0 1119 aa26.06■■□□□ 1.76
SMARCB1-201ENST00000263121 TMOD4Q9NZQ9 345 aa26.06■■□□□ 1.76
SMARCB1-201ENST00000263121 RLFQ13129 1914 aa26.06■■□□□ 1.76
SMARCB1-201ENST00000263121 PIK3CDO00329 1044 aa26.05■■□□□ 1.76
SMARCB1-201ENST00000263121 KINO60870 393 aaKnown RBP26.05■■□□□ 1.76
SMARCB1-201ENST00000263121 RBM43Q6ZSC3 357 aaKnown RBP26.05■■□□□ 1.76
SMARCB1-201ENST00000263121 CSRNP2Q9H175 543 aa26.05■■□□□ 1.76
SMARCB1-201ENST00000263121 RRAGCQ9HB90 399 aa26.05■■□□□ 1.76
SMARCB1-201ENST00000263121 ABCB11O95342 1321 aa26.05■■□□□ 1.76
SMARCB1-201ENST00000263121 SMCHD1A6NHR9 2005 aa26.04■■□□□ 1.76
SMARCB1-201ENST00000263121 LAD1O00515 517 aa26.04■■□□□ 1.76
SMARCB1-201ENST00000263121 TTLL12Q14166 644 aaPredicted RBP26.04■■□□□ 1.76
SMARCB1-201ENST00000263121 MAP1SQ66K74 1059 aaPredicted RBP26.04■■□□□ 1.76
SMARCB1-201ENST00000263121 CNKSR2Q8WXI2 1034 aa26.04■■□□□ 1.76
SMARCB1-201ENST00000263121 CLMNQ96JQ2 1002 aa26.04■■□□□ 1.76
SMARCB1-201ENST00000263121 TNMDQ9H2S6 317 aa26.04■■□□□ 1.76
SMARCB1-201ENST00000263121 ELP3Q9H9T3 547 aa26.04■■□□□ 1.76
SMARCB1-201ENST00000263121 MRPL11Q9Y3B7 192 aaKnown RBP26.04■■□□□ 1.76
SMARCB1-201ENST00000263121 CCNT1O60563 726 aaKnown RBP26.03■■□□□ 1.76
SMARCB1-201ENST00000263121 FDX1P10109 184 aa26.03■■□□□ 1.76
SMARCB1-201ENST00000263121 PPATQ06203 517 aa26.03■■□□□ 1.76
SMARCB1-201ENST00000263121 CAMK4Q16566 473 aa26.03■■□□□ 1.76
SMARCB1-201ENST00000263121 ARMC9Q7Z3E5 817 aa26.03■■□□□ 1.76
SMARCB1-201ENST00000263121 ERO1BQ86YB8 467 aa26.03■■□□□ 1.76
SMARCB1-201ENST00000263121 P2RX7Q99572 595 aaKnown RBP26.03■■□□□ 1.76
SMARCB1-201ENST00000263121 ANO3Q9BYT9 981 aa26.03■■□□□ 1.76
SMARCB1-201ENST00000263121 TMEM60Q9H2L4 133 aa26.03■■□□□ 1.76
SMARCB1-201ENST00000263121 SPDYE5A6NIY4 337 aa26.03■■□□□ 1.76
SMARCB1-201ENST00000263121 IL17AQ16552 155 aa26.03■■□□□ 1.76
SMARCB1-201ENST00000263121 SPECC1Q5M775 1068 aa26.03■■□□□ 1.76
SMARCB1-201ENST00000263121 LOC285556D6RIA3 1793 aa26.02■■□□□ 1.76
SMARCB1-201ENST00000263121 MYH7BA7E2Y1 1941 aa26.02■■□□□ 1.76
SMARCB1-201ENST00000263121 ZNF202O95125 648 aa26.02■■□□□ 1.76
SMARCB1-201ENST00000263121 FOSP01100 380 aaPredicted RBP26.02■■□□□ 1.76
SMARCB1-201ENST00000263121 PRPHP41219 470 aa26.02■■□□□ 1.76
SMARCB1-201ENST00000263121 CATSPERGQ6ZRH7 1159 aa26.02■■□□□ 1.76
SMARCB1-201ENST00000263121 AGBL1Q96MI9 1066 aa26.02■■□□□ 1.76
SMARCB1-201ENST00000263121 FAM13BQ9NYF5 915 aa26.02■■□□□ 1.76
SMARCB1-201ENST00000263121 CCPG1Q9ULG6 757 aa26.02■■□□□ 1.76
SMARCB1-201ENST00000263121 VWA3AA6NCI4 1184 aa26.01■■□□□ 1.75
SMARCB1-201ENST00000263121 CTAGE5O15320 804 aa26.01■■□□□ 1.75
SMARCB1-201ENST00000263121 NEMFO60524 1076 aa26.01■■□□□ 1.75
SMARCB1-201ENST00000263121 SYKP43405 635 aa26.01■■□□□ 1.75
SMARCB1-201ENST00000263121 LDLRAD1Q5T700 205 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms