RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 TBCKQ8TEA7 893 aa14.83□□□□□ -0.04
VAMP7-201ENST00000262640 RPAP3Q9H6T3 665 aaPredicted RBP14.83□□□□□ -0.04
VAMP7-201ENST00000262640 FAM237AA0A1B0GTK4 181 aa14.82□□□□□ -0.04
VAMP7-201ENST00000262640 A0A1B0GVL5 298 aa14.82□□□□□ -0.04
VAMP7-201ENST00000262640 KINO60870 393 aaKnown RBP14.82□□□□□ -0.04
VAMP7-201ENST00000262640 UBE2SQ16763 222 aa14.82□□□□□ -0.04
VAMP7-201ENST00000262640 SHC4Q6S5L8 630 aa14.82□□□□□ -0.04
VAMP7-201ENST00000262640 FMR1NBQ8N0W7 255 aaPredicted RBP14.82□□□□□ -0.04
VAMP7-201ENST00000262640 RBM46Q8TBY0 533 aaKnown RBP14.82□□□□□ -0.04
VAMP7-201ENST00000262640 CLIC6Q96NY7 704 aa14.82□□□□□ -0.04
VAMP7-201ENST00000262640 PAPPA2Q9BXP8 1791 aa14.82□□□□□ -0.04
VAMP7-201ENST00000262640 NDUFA8P51970 172 aa14.82□□□□□ -0.04
VAMP7-201ENST00000262640 AP3B2Q13367 1082 aa14.82□□□□□ -0.04
VAMP7-201ENST00000262640 DGKZQ13574 1117 aa14.82□□□□□ -0.04
VAMP7-201ENST00000262640 MAP3K11Q16584 847 aa14.82□□□□□ -0.04
VAMP7-201ENST00000262640 ARL6IP4Q66PJ3 421 aaKnown RBP14.82□□□□□ -0.04
VAMP7-201ENST00000262640 CCDC174Q6PII3 467 aa14.82□□□□□ -0.04
VAMP7-201ENST00000262640 LRSAM1Q6UWE0 723 aa14.82□□□□□ -0.04
VAMP7-201ENST00000262640 TMOD4Q9NZQ9 345 aa14.82□□□□□ -0.04
VAMP7-201ENST00000262640 CLEC11AQ9Y240 323 aa14.82□□□□□ -0.04
VAMP7-201ENST00000262640 LAD1O00515 517 aa14.81□□□□□ -0.04
VAMP7-201ENST00000262640 FLOT1O75955 427 aa14.81□□□□□ -0.04
VAMP7-201ENST00000262640 FDX1P10109 184 aa14.81□□□□□ -0.04
VAMP7-201ENST00000262640 PFKFB1P16118 471 aa14.81□□□□□ -0.04
VAMP7-201ENST00000262640 HMGCS2P54868 508 aa14.81□□□□□ -0.04
VAMP7-201ENST00000262640 ANKRD13AQ8IZ07 590 aa14.81□□□□□ -0.04
VAMP7-201ENST00000262640 TNMDQ9H2S6 317 aa14.81□□□□□ -0.04
VAMP7-201ENST00000262640 PPP1R9AQ9ULJ8 1098 aa14.81□□□□□ -0.04
VAMP7-201ENST00000262640 HPSEQ9Y251 543 aa14.81□□□□□ -0.04
VAMP7-201ENST00000262640 PHIPQ8WWQ0 1821 aa14.81□□□□□ -0.04
VAMP7-201ENST00000262640 ABCB11O95342 1321 aa14.81□□□□□ -0.04
VAMP7-201ENST00000262640 TTLL12Q14166 644 aaPredicted RBP14.81□□□□□ -0.04
VAMP7-201ENST00000262640 LETM2Q2VYF4 491 aa14.81□□□□□ -0.04
VAMP7-201ENST00000262640 SH3D19Q5HYK7 790 aa14.81□□□□□ -0.04
VAMP7-201ENST00000262640 SAMD1Q6SPF0 538 aaPredicted RBP14.81□□□□□ -0.04
VAMP7-201ENST00000262640 C4orf32Q8N8J7 132 aa14.81□□□□□ -0.04
VAMP7-201ENST00000262640 FAM13BQ9NYF5 915 aa14.81□□□□□ -0.04
VAMP7-201ENST00000262640 PNMA2Q9UL42 364 aa14.81□□□□□ -0.04
VAMP7-201ENST00000262640 MRPL11Q9Y3B7 192 aaKnown RBP14.81□□□□□ -0.04
VAMP7-201ENST00000262640 MRVI1Q9Y6F6 885 aa14.81□□□□□ -0.04
VAMP7-201ENST00000262640 GOLGA6L3A6NEY3 463 aa14.8□□□□□ -0.04
VAMP7-201ENST00000262640 USP17L15C9J2P7 530 aa14.8□□□□□ -0.04
VAMP7-201ENST00000262640 USP17L13C9JLJ4 530 aa14.8□□□□□ -0.04
VAMP7-201ENST00000262640 USP17L11C9JVI0 530 aa14.8□□□□□ -0.04
VAMP7-201ENST00000262640 USP17L18D6R9N7 530 aa14.8□□□□□ -0.04
VAMP7-201ENST00000262640 USP17L22D6RA61 530 aa14.8□□□□□ -0.04
VAMP7-201ENST00000262640 USP17L17D6RBQ6 530 aa14.8□□□□□ -0.04
VAMP7-201ENST00000262640 USP17L19D6RCP7 530 aa14.8□□□□□ -0.04
VAMP7-201ENST00000262640 USP17L20D6RJB6 530 aa14.8□□□□□ -0.04
VAMP7-201ENST00000262640 MEIS2O14770 477 aa14.8□□□□□ -0.04
VAMP7-201ENST00000262640 CTAGE5O15320 804 aa14.8□□□□□ -0.04
VAMP7-201ENST00000262640 ICAM1P05362 532 aa14.8□□□□□ -0.04
VAMP7-201ENST00000262640 USP17L24Q0WX57 530 aa14.8□□□□□ -0.04
VAMP7-201ENST00000262640 USP17L6PQ6QN14 398 aa14.8□□□□□ -0.04
VAMP7-201ENST00000262640 ARMC9Q7Z3E5 817 aa14.8□□□□□ -0.04
VAMP7-201ENST00000262640 FSD2A1L4K1 749 aa14.8□□□□□ -0.04
VAMP7-201ENST00000262640 DCAF8L1A6NGE4 600 aa14.8□□□□□ -0.04
VAMP7-201ENST00000262640 PIK3CDO00329 1044 aa14.8□□□□□ -0.04
VAMP7-201ENST00000262640 CCNT1O60563 726 aaKnown RBP14.8□□□□□ -0.04
VAMP7-201ENST00000262640 FOSP01100 380 aaPredicted RBP14.8□□□□□ -0.04
VAMP7-201ENST00000262640 LDHDQ86WU2 507 aa14.8□□□□□ -0.04
VAMP7-201ENST00000262640 NAP1L4Q99733 375 aaKnown RBP14.8□□□□□ -0.04
VAMP7-201ENST00000262640 CSRNP2Q9H175 543 aa14.8□□□□□ -0.04
VAMP7-201ENST00000262640 SLC38A10Q9HBR0 1119 aa14.8□□□□□ -0.04
VAMP7-201ENST00000262640 OTOFQ9HC10 1997 aa14.79□□□□□ -0.04
VAMP7-201ENST00000262640 OPLAHO14841 1288 aa14.79□□□□□ -0.04
VAMP7-201ENST00000262640 ZBED4O75132 1171 aa14.79□□□□□ -0.04
VAMP7-201ENST00000262640 PRPHP41219 470 aa14.79□□□□□ -0.04
VAMP7-201ENST00000262640 SYKP43405 635 aa14.79□□□□□ -0.04
VAMP7-201ENST00000262640 GRIN1Q05586 938 aa14.79□□□□□ -0.04
VAMP7-201ENST00000262640 PPATQ06203 517 aa14.79□□□□□ -0.04
VAMP7-201ENST00000262640 CAMK4Q16566 473 aa14.79□□□□□ -0.04
VAMP7-201ENST00000262640 RBM43Q6ZSC3 357 aaKnown RBP14.79□□□□□ -0.04
VAMP7-201ENST00000262640 ERO1BQ86YB8 467 aa14.79□□□□□ -0.04
VAMP7-201ENST00000262640 ANO3Q9BYT9 981 aa14.79□□□□□ -0.04
VAMP7-201ENST00000262640 CTDP1Q9Y5B0 961 aaPredicted RBP14.79□□□□□ -0.04
VAMP7-201ENST00000262640 NEMFO60524 1076 aa14.78□□□□□ -0.04
VAMP7-201ENST00000262640 ZNF202O95125 648 aa14.78□□□□□ -0.04
VAMP7-201ENST00000262640 GAS2L3Q86XJ1 694 aa14.78□□□□□ -0.04
VAMP7-201ENST00000262640 TIGD1Q96MW7 591 aa14.78□□□□□ -0.04
VAMP7-201ENST00000262640 ELP3Q9H9T3 547 aa14.78□□□□□ -0.04
VAMP7-201ENST00000262640 KCNH3Q9ULD8 1083 aa14.78□□□□□ -0.04
VAMP7-201ENST00000262640 CCPG1Q9ULG6 757 aa14.78□□□□□ -0.04
VAMP7-201ENST00000262640 ZNF536O15090 1300 aa14.78□□□□□ -0.04
VAMP7-201ENST00000262640 POTEIP0CG38 1075 aa14.78□□□□□ -0.04
VAMP7-201ENST00000262640 POTEJP0CG39 1038 aa14.78□□□□□ -0.04
VAMP7-201ENST00000262640 GCFC2P16383 781 aaKnown RBP14.78□□□□□ -0.04
VAMP7-201ENST00000262640 TAL1P17542 331 aaPredicted RBP14.78□□□□□ -0.04
VAMP7-201ENST00000262640 RRAGCQ9HB90 399 aa14.78□□□□□ -0.04
VAMP7-201ENST00000262640 VWA3AA6NCI4 1184 aa14.77□□□□□ -0.04
VAMP7-201ENST00000262640 SPDYE5A6NIY4 337 aa14.77□□□□□ -0.04
VAMP7-201ENST00000262640 SPDYE3A6NKU9 549 aa14.77□□□□□ -0.04
VAMP7-201ENST00000262640 LONP1P36776 959 aaKnown RBP14.77□□□□□ -0.04
VAMP7-201ENST00000262640 MAP1SQ66K74 1059 aaPredicted RBP14.77□□□□□ -0.04
VAMP7-201ENST00000262640 PPP4R3AQ6IN85 833 aa14.77□□□□□ -0.04
VAMP7-201ENST00000262640 TMEM60Q9H2L4 133 aa14.77□□□□□ -0.04
VAMP7-201ENST00000262640 GCOM1H8Y6P7 765 aaPredicted RBP14.77□□□□□ -0.05
VAMP7-201ENST00000262640 OR52Z1P0C646 297 aa14.77□□□□□ -0.05
VAMP7-201ENST00000262640 POLR2MP0CAP2 368 aa14.77□□□□□ -0.05
VAMP7-201ENST00000262640 USP11P51784 963 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms