RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 ZNF213O14771 459 aa14.4□□□□□ -0.1
TRAF4-202ENST00000262396 CABYRO75952 493 aa14.4□□□□□ -0.1
TRAF4-202ENST00000262396 TIMP1P01033 207 aa14.4□□□□□ -0.1
TRAF4-202ENST00000262396 ICAM1P05362 532 aa14.4□□□□□ -0.1
TRAF4-202ENST00000262396 HSPD1P10809 573 aaKnown RBP14.4□□□□□ -0.1
TRAF4-202ENST00000262396 CST5P28325 142 aaPredicted RBP14.4□□□□□ -0.1
TRAF4-202ENST00000262396 MRPL12P52815 198 aaKnown RBP14.4□□□□□ -0.1
TRAF4-202ENST00000262396 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.4□□□□□ -0.1
TRAF4-202ENST00000262396 FAM133AQ8N9E0 248 aa14.4□□□□□ -0.1
TRAF4-202ENST00000262396 ESR2Q92731 530 aa14.4□□□□□ -0.1
TRAF4-202ENST00000262396 PPP1R12CQ9BZL4 782 aa14.4□□□□□ -0.1
TRAF4-202ENST00000262396 GPHNQ9NQX3 736 aaPredicted RBP14.4□□□□□ -0.1
TRAF4-202ENST00000262396 CYP39A1Q9NYL5 469 aa14.4□□□□□ -0.1
TRAF4-202ENST00000262396 PARP14Q460N5 1801 aa14.4□□□□□ -0.1
TRAF4-202ENST00000262396 GREB1LQ9C091 1923 aaPredicted RBP14.39□□□□□ -0.11
TRAF4-202ENST00000262396 SOWAHBA6NEL2 793 aa14.39□□□□□ -0.11
TRAF4-202ENST00000262396 DHX16O60231 1041 aaKnown RBP14.39□□□□□ -0.11
TRAF4-202ENST00000262396 CALML3P27482 149 aa14.39□□□□□ -0.11
TRAF4-202ENST00000262396 FSCN1Q16658 493 aaKnown RBP14.39□□□□□ -0.11
TRAF4-202ENST00000262396 BRDTQ58F21 947 aaPredicted RBP14.39□□□□□ -0.11
TRAF4-202ENST00000262396 MUM1L1Q5H9M0 696 aa14.39□□□□□ -0.11
TRAF4-202ENST00000262396 IQSEC1Q6DN90 963 aa14.39□□□□□ -0.11
TRAF4-202ENST00000262396 TTBK2Q6IQ55 1244 aa14.39□□□□□ -0.11
TRAF4-202ENST00000262396 CXCL17Q6UXB2 119 aa14.39□□□□□ -0.11
TRAF4-202ENST00000262396 IQCA1Q86XH1 822 aa14.39□□□□□ -0.11
TRAF4-202ENST00000262396 TICAM2Q86XR7 235 aa14.39□□□□□ -0.11
TRAF4-202ENST00000262396 FBXO16Q8IX29 292 aaPredicted RBP14.39□□□□□ -0.11
TRAF4-202ENST00000262396 TMEM47Q9BQJ4 181 aa14.39□□□□□ -0.11
TRAF4-202ENST00000262396 UPF3AQ9H1J1 476 aaKnown RBP14.39□□□□□ -0.11
TRAF4-202ENST00000262396 MTIF3Q9H2K0 278 aaKnown RBP14.39□□□□□ -0.11
TRAF4-202ENST00000262396 SEMA6BQ9H3T3 888 aa14.39□□□□□ -0.11
TRAF4-202ENST00000262396 ZNF536O15090 1300 aa14.39□□□□□ -0.11
TRAF4-202ENST00000262396 SMCHD1A6NHR9 2005 aa14.38□□□□□ -0.11
TRAF4-202ENST00000262396 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.38□□□□□ -0.11
TRAF4-202ENST00000262396 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.38□□□□□ -0.11
TRAF4-202ENST00000262396 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.38□□□□□ -0.11
TRAF4-202ENST00000262396 HIP1O00291 1037 aa14.38□□□□□ -0.11
TRAF4-202ENST00000262396 PCP11498 1178 aaKnown RBP14.38□□□□□ -0.11
TRAF4-202ENST00000262396 FOSL2P15408 326 aa14.38□□□□□ -0.11
TRAF4-202ENST00000262396 IRX5P78411 483 aaPredicted RBP14.38□□□□□ -0.11
TRAF4-202ENST00000262396 PDE4DQ08499 809 aa14.38□□□□□ -0.11
TRAF4-202ENST00000262396 BAATQ14032 418 aaPredicted RBP14.38□□□□□ -0.11
TRAF4-202ENST00000262396 CCDC178Q5BJE1 867 aa14.38□□□□□ -0.11
TRAF4-202ENST00000262396 AKNAD1Q5T1N1 836 aa14.38□□□□□ -0.11
TRAF4-202ENST00000262396 MFSD5Q6N075 450 aa14.38□□□□□ -0.11
TRAF4-202ENST00000262396 TTC14Q96N46 770 aa14.38□□□□□ -0.11
TRAF4-202ENST00000262396 CDX2Q99626 313 aaPredicted RBP14.38□□□□□ -0.11
TRAF4-202ENST00000262396 RANBP17Q9H2T7 1088 aaKnown RBP14.38□□□□□ -0.11
TRAF4-202ENST00000262396 VTA1Q9NP79 307 aa14.38□□□□□ -0.11
TRAF4-202ENST00000262396 LAMA3Q16787 3333 aa14.38□□□□□ -0.11
TRAF4-202ENST00000262396 SALL3Q9BXA9 1300 aa14.38□□□□□ -0.11
TRAF4-202ENST00000262396 SDSP20132 328 aa14.37□□□□□ -0.11
TRAF4-202ENST00000262396 ITGB8P26012 769 aa14.37□□□□□ -0.11
TRAF4-202ENST00000262396 ITGA7Q13683 1181 aa14.37□□□□□ -0.11
TRAF4-202ENST00000262396 CCSAPQ6IQ19 270 aaPredicted RBP14.37□□□□□ -0.11
TRAF4-202ENST00000262396 CWC27Q6UX04 472 aaKnown RBP14.37□□□□□ -0.11
TRAF4-202ENST00000262396 RNF207Q6ZRF8 634 aa14.37□□□□□ -0.11
TRAF4-202ENST00000262396 RASGRP2Q7LDG7 609 aa14.37□□□□□ -0.11
TRAF4-202ENST00000262396 ZNF589Q86UQ0 364 aaPredicted RBP14.37□□□□□ -0.11
TRAF4-202ENST00000262396 CHD1LQ86WJ1 897 aa14.37□□□□□ -0.11
TRAF4-202ENST00000262396 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.37□□□□□ -0.115e-7■■■■■ 32.1
TRAF4-202ENST00000262396 FGD4Q96M96 766 aa14.37□□□□□ -0.11
TRAF4-202ENST00000262396 GUCD1Q96NT3 240 aa14.37□□□□□ -0.11
TRAF4-202ENST00000262396 ZKSCAN3Q9BRR0 538 aa14.37□□□□□ -0.11
TRAF4-202ENST00000262396 KAT14Q9H8E8 782 aa14.37□□□□□ -0.11
TRAF4-202ENST00000262396 TCP11L1Q9NUJ3 509 aa14.37□□□□□ -0.11
TRAF4-202ENST00000262396 RAD50Q92878 1312 aa14.37□□□□□ -0.11
TRAF4-202ENST00000262396 FOXP2O15409 715 aa14.36□□□□□ -0.11
TRAF4-202ENST00000262396 ADCY6O43306 1168 aa14.36□□□□□ -0.11
TRAF4-202ENST00000262396 MYL3P08590 195 aa14.36□□□□□ -0.11
TRAF4-202ENST00000262396 SMPD1P17405 629 aa14.36□□□□□ -0.11
TRAF4-202ENST00000262396 EPHB4P54760 987 aa14.36□□□□□ -0.11
TRAF4-202ENST00000262396 CHMP4BP1P59074 171 aa14.36□□□□□ -0.11
TRAF4-202ENST00000262396 USH1GQ495M9 461 aa14.36□□□□□ -0.11
TRAF4-202ENST00000262396 PSRC1Q6PGN9 363 aaPredicted RBP14.36□□□□□ -0.11
TRAF4-202ENST00000262396 MAFAQ8NHW3 353 aaPredicted RBP14.36□□□□□ -0.11
TRAF4-202ENST00000262396 MYLIPQ8WY64 445 aa14.36□□□□□ -0.11
TRAF4-202ENST00000262396 SEZ6LQ9BYH1 1024 aa14.36□□□□□ -0.11
TRAF4-202ENST00000262396 WDR11Q9BZH6 1224 aa14.36□□□□□ -0.11
TRAF4-202ENST00000262396 HIPK3Q9H422 1215 aa14.36□□□□□ -0.11
TRAF4-202ENST00000262396 PDGFCQ9NRA1 345 aa14.36□□□□□ -0.11
TRAF4-202ENST00000262396 ZMYM6O95789 1325 aa14.36□□□□□ -0.11
TRAF4-202ENST00000262396 DNAH12Q6ZR08 3092 aa14.35□□□□□ -0.11
TRAF4-202ENST00000262396 FGRP09769 529 aa14.35□□□□□ -0.11
TRAF4-202ENST00000262396 PDHBP11177 359 aa14.35□□□□□ -0.11
TRAF4-202ENST00000262396 CSF2RAP15509 400 aa14.35□□□□□ -0.11
TRAF4-202ENST00000262396 CPT1AP50416 773 aa14.35□□□□□ -0.11
TRAF4-202ENST00000262396 CDK7P50613 346 aa14.35□□□□□ -0.11
TRAF4-202ENST00000262396 ALDH5A1P51649 535 aaPredicted RBP14.35□□□□□ -0.11
TRAF4-202ENST00000262396 IMMTQ16891 758 aaKnown RBP14.35□□□□□ -0.11
TRAF4-202ENST00000262396 FAM47CQ5HY64 1035 aa14.35□□□□□ -0.11
TRAF4-202ENST00000262396 GPATCH4Q5T3I0 446 aaKnown RBP14.35□□□□□ -0.11
TRAF4-202ENST00000262396 BTNL9Q6UXG8 535 aa14.35□□□□□ -0.11
TRAF4-202ENST00000262396 OR6J1Q8NGC5 347 aa14.35□□□□□ -0.11
TRAF4-202ENST00000262396 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.35□□□□□ -0.113e-8■■□□□ 13.4
TRAF4-202ENST00000262396 POLR3EQ9NVU0 708 aa14.35□□□□□ -0.11
TRAF4-202ENST00000262396 CTNNA3Q9UI47 895 aa14.35□□□□□ -0.11
TRAF4-202ENST00000262396 MSRAQ9UJ68 235 aa14.35□□□□□ -0.11
TRAF4-202ENST00000262396 TBX21Q9UL17 535 aa14.35□□□□□ -0.11
TRAF4-202ENST00000262396 Q9Y3F1 56 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms