RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 TMC4Q7Z404 712 aa17.73■□□□□ 0.43
LMNB1-201ENST00000261366 SPATA4Q8NEY3 305 aa17.73■□□□□ 0.43
LMNB1-201ENST00000261366 AENQ8WTP8 325 aaKnown RBP17.73■□□□□ 0.43
LMNB1-201ENST00000261366 TMEM60Q9H2L4 133 aa17.73■□□□□ 0.43
LMNB1-201ENST00000261366 CENPHQ9H3R5 247 aa17.73■□□□□ 0.43
LMNB1-201ENST00000261366 DISC1Q9NRI5 854 aa17.73■□□□□ 0.43
LMNB1-201ENST00000261366 CAPN7Q9Y6W3 813 aa17.73■□□□□ 0.43
LMNB1-201ENST00000261366 NUTM2BA6NNL0 878 aaPredicted RBP17.73■□□□□ 0.43
LMNB1-201ENST00000261366 NUTM2EB1AL46 878 aaPredicted RBP17.73■□□□□ 0.43
LMNB1-201ENST00000261366 EIF3HO15372 352 aaKnown RBP eCLIP17.73■□□□□ 0.43
LMNB1-201ENST00000261366 FCER1AP12319 257 aa17.73■□□□□ 0.43
LMNB1-201ENST00000261366 GUCY2FP51841 1108 aa17.73■□□□□ 0.43
LMNB1-201ENST00000261366 ENOX2Q16206 610 aaKnown RBP17.73■□□□□ 0.43
LMNB1-201ENST00000261366 NAALADL2Q58DX5 795 aa17.73■□□□□ 0.43
LMNB1-201ENST00000261366 TTMPQ5BVD1 217 aa17.73■□□□□ 0.43
LMNB1-201ENST00000261366 TMTC3Q6ZXV5 915 aa17.73■□□□□ 0.43
LMNB1-201ENST00000261366 GRIN2DO15399 1336 aa17.73■□□□□ 0.43
LMNB1-201ENST00000261366 PDS5AQ29RF7 1337 aaKnown RBP17.73■□□□□ 0.43
LMNB1-201ENST00000261366 USP17L12C9JPN9 530 aa17.73■□□□□ 0.43
LMNB1-201ENST00000261366 USP17L21D6R901 530 aa17.73■□□□□ 0.43
LMNB1-201ENST00000261366 MYO1FO00160 1098 aa17.73■□□□□ 0.43
LMNB1-201ENST00000261366 EPHB6O15197 1021 aa17.73■□□□□ 0.43
LMNB1-201ENST00000261366 DNM2P50570 870 aa17.73■□□□□ 0.43
LMNB1-201ENST00000261366 SNX12Q9UMY4 172 aa17.73■□□□□ 0.43
LMNB1-201ENST00000261366 JAG2Q9Y219 1238 aa17.73■□□□□ 0.43
LMNB1-201ENST00000261366 MYH6P13533 1939 aa17.72■□□□□ 0.43
LMNB1-201ENST00000261366 SCG2P13521 617 aa17.72■□□□□ 0.43
LMNB1-201ENST00000261366 ANKRD40Q6AI12 368 aa17.72■□□□□ 0.43
LMNB1-201ENST00000261366 MMRN2Q9H8L6 949 aa17.72■□□□□ 0.43
LMNB1-201ENST00000261366 CNTNAP5Q8WYK1 1306 aa17.72■□□□□ 0.43
LMNB1-201ENST00000261366 AKR1B10O60218 316 aa17.72■□□□□ 0.43
LMNB1-201ENST00000261366 SHOX2O60902 331 aaPredicted RBP17.72■□□□□ 0.43
LMNB1-201ENST00000261366 HNRNPH1P31943 449 aaKnown RBP17.72■□□□□ 0.43
LMNB1-201ENST00000261366 GUCY1A3Q02108 690 aa17.72■□□□□ 0.43
LMNB1-201ENST00000261366 INF2Q27J81 1249 aa17.72■□□□□ 0.43
LMNB1-201ENST00000261366 LRRC15Q8TF66 581 aa17.72■□□□□ 0.43
LMNB1-201ENST00000261366 RPGRIP1Q96KN7 1286 aa17.72■□□□□ 0.43
LMNB1-201ENST00000261366 MROH5Q6ZUA9 1318 aa17.71■□□□□ 0.43
LMNB1-201ENST00000261366 MYH10P35580 1976 aa17.71■□□□□ 0.43
LMNB1-201ENST00000261366 TACC1O75410 805 aa17.71■□□□□ 0.43
LMNB1-201ENST00000261366 SRGNP10124 158 aa17.71■□□□□ 0.43
LMNB1-201ENST00000261366 EEF1GP26641 437 aaKnown RBP17.71■□□□□ 0.43
LMNB1-201ENST00000261366 PDE4DQ08499 809 aa17.71■□□□□ 0.43
LMNB1-201ENST00000261366 STK4Q13043 487 aa17.71■□□□□ 0.43
LMNB1-201ENST00000261366 PTPROQ16827 1216 aa17.71■□□□□ 0.43
LMNB1-201ENST00000261366 DTHD1Q6ZMT9 781 aa17.71■□□□□ 0.43
LMNB1-201ENST00000261366 DUSP9Q99956 384 aaKnown RBP17.71■□□□□ 0.43
LMNB1-201ENST00000261366 NID2Q14112 1375 aa17.71■□□□□ 0.43
LMNB1-201ENST00000261366 LRP6O75581 1613 aa17.71■□□□□ 0.43
LMNB1-201ENST00000261366 HSF2BPO75031 334 aa17.71■□□□□ 0.43
LMNB1-201ENST00000261366 VAV2P52735 878 aa17.71■□□□□ 0.43
LMNB1-201ENST00000261366 ASIC1P78348 528 aa17.71■□□□□ 0.43
LMNB1-201ENST00000261366 MCTP2Q6DN12 878 aa17.71■□□□□ 0.43
LMNB1-201ENST00000261366 IQCEQ6IPM2 695 aa17.71■□□□□ 0.43
LMNB1-201ENST00000261366 MYH2Q9UKX2 1941 aa17.71■□□□□ 0.43
LMNB1-201ENST00000261366 CYP2D6P10635 497 aa17.7■□□□□ 0.42
LMNB1-201ENST00000261366 EIF4A3P38919 411 aaKnown RBP17.7■□□□□ 0.42
LMNB1-201ENST00000261366 ZBED6P86452 979 aa17.7■□□□□ 0.42
LMNB1-201ENST00000261366 TTI2Q6NXR4 508 aa17.7■□□□□ 0.42
LMNB1-201ENST00000261366 KCNV1Q6PIU1 500 aa17.7■□□□□ 0.42
LMNB1-201ENST00000261366 ZIM3Q96PE6 472 aa17.7■□□□□ 0.42
LMNB1-201ENST00000261366 OSBPL9Q96SU4 736 aa17.7■□□□□ 0.42
LMNB1-201ENST00000261366 RBM12Q9NTZ6 932 aaKnown RBP17.7■□□□□ 0.42
LMNB1-201ENST00000261366 NFU1Q9UMS0 254 aa17.7■□□□□ 0.42
LMNB1-201ENST00000261366 MYH13Q9UKX3 1938 aa17.7■□□□□ 0.42
LMNB1-201ENST00000261366 A0A1W2PQC6 194 aa17.7■□□□□ 0.42
LMNB1-201ENST00000261366 FAM153BP0C7A2 387 aa17.7■□□□□ 0.42
LMNB1-201ENST00000261366 MEA1Q16626 185 aa17.7■□□□□ 0.42
LMNB1-201ENST00000261366 FAM153CQ494X1 144 aa17.7■□□□□ 0.42
LMNB1-201ENST00000261366 RNF187Q5TA31 235 aaPredicted RBP17.7■□□□□ 0.42
LMNB1-201ENST00000261366 C8orf74Q6P047 294 aa17.7■□□□□ 0.42
LMNB1-201ENST00000261366 DZIP3Q86Y13 1208 aaKnown RBP17.7■□□□□ 0.42
LMNB1-201ENST00000261366 CCDC43Q96MW1 224 aaKnown RBP17.7■□□□□ 0.42
LMNB1-201ENST00000261366 FAM153AQ9UHL3 310 aa17.7■□□□□ 0.42
LMNB1-201ENST00000261366 SALL4Q9UJQ4 1053 aa17.7■□□□□ 0.42
LMNB1-201ENST00000261366 PCDHA13Q9Y5I0 950 aa17.7■□□□□ 0.42
LMNB1-201ENST00000261366 PNPLA7Q6ZV29 1317 aa17.7■□□□□ 0.42
LMNB1-201ENST00000261366 AMOTL1Q8IY63 956 aa17.69■□□□□ 0.42
LMNB1-201ENST00000261366 SLC39A2Q9NP94 309 aa17.69■□□□□ 0.42
LMNB1-201ENST00000261366 ARHGAP20Q9P2F6 1191 aa17.69■□□□□ 0.42
LMNB1-201ENST00000261366 CHD4Q14839 1912 aa17.69■□□□□ 0.42
LMNB1-201ENST00000261366 CCDC194A0A1B0GVG4 234 aa17.69■□□□□ 0.42
LMNB1-201ENST00000261366 KLRC4O43908 158 aa17.69■□□□□ 0.42
LMNB1-201ENST00000261366 USO1O60763 962 aaKnown RBP17.69■□□□□ 0.42
LMNB1-201ENST00000261366 CYP19A1P11511 503 aaPredicted RBP17.69■□□□□ 0.42
LMNB1-201ENST00000261366 SEC24CP53992 1094 aa17.69■□□□□ 0.42
LMNB1-201ENST00000261366 RASSF7Q02833 373 aa17.69■□□□□ 0.42
LMNB1-201ENST00000261366 NNTQ13423 1086 aa17.69■□□□□ 0.42
LMNB1-201ENST00000261366 TRADDQ15628 312 aa17.69■□□□□ 0.42
LMNB1-201ENST00000261366 PAXIP1Q6ZW49 1069 aaPredicted RBP17.69■□□□□ 0.42
LMNB1-201ENST00000261366 RRAGAQ7L523 313 aa17.69■□□□□ 0.42
LMNB1-201ENST00000261366 CCDC155Q8N6L0 562 aa17.69■□□□□ 0.42
LMNB1-201ENST00000261366 PROCA1Q8NCQ7 364 aaPredicted RBP17.69■□□□□ 0.42
LMNB1-201ENST00000261366 TTYH3Q9C0H2 523 aa17.69■□□□□ 0.42
LMNB1-201ENST00000261366 CPVLQ9H3G5 476 aa17.69■□□□□ 0.42
LMNB1-201ENST00000261366 THAP9Q9H5L6 903 aa17.69■□□□□ 0.42
LMNB1-201ENST00000261366 RBM28Q9NW13 759 aaKnown RBP17.69■□□□□ 0.42
LMNB1-201ENST00000261366 CARSP49589 748 aaKnown RBP17.69■□□□□ 0.42
LMNB1-201ENST00000261366 KIF11P52732 1056 aa17.69■□□□□ 0.42
LMNB1-201ENST00000261366 STIM2Q9P246 746 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms